Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400095861
CDS Infomation

pacid=37442648 polypeptide=PGSC0003DMP400067536 locus=PGSC0003DMG400045432 ID=PGSC0003DMT400095861.v4.03 annot-version=v4.03
Sequence

ATGCTGGCAAGAGCTGTTGCTGTGGCACTTGATGTTCTTCCTTTGAAGGAAATGGATGTT
TCTGTGGAGGGTCAAGAAGTGGTTGAGTTTGTGAGGAATCAAGCTGTTAAGTTGAAGTTT
GAAGTGGAAATGGATGATGGGAGAATGCAAGTGAATGTTTTGAAGATTTTGGATCAACTT
GAAAATGAAGTTATTCCAGAAACGCGTGATCTGAAAAGGGTTCTTGATTCTTTAGGGATT
ACACGTTGGAGCGCGTGTAATAGAGAAGTTAAGTTCTTGGATAATGAGATGTTGTTGGAG
GGGAATACTGAGGAGAAGAGAGATATGGGAATCCTTAGTAGCTTAATGGGGTTCATGATA
TACTGCAGGGGAACTCTGTTTGAAGTATTGGATAATGGAGCAGGCAGACAAATCAATGGA
GGCAGTACTAATGCAGATCAAGTCATCAGGTTCTTGAATCTTGATGATTTCAGGTGTCCA
ATTACACTTGAAATCATGAGTGAGCCAGTGACAATAGCCTCAGGTCACACATATGATCGG
GCTTCGATTCTGAAATGGTTCAGAGCTGGAAACTCCACTTGTCCAAAGACTGGTGAGAGG
TTAACAAGTATTGATTTGGTTCCTAATTTTGCTTTGAAGGTTTTAATCAAGCAGTATTGC
TCCGCGAATGGTATTCCATTTGTGGAGACTGGTAGGCGAAATCGTGATGCTGGAAGATTT
GTTGGTTCAAGCAGTGTGGCTAATGAGCAGGCTATGAAGTTGCTTGCAAGTTTTCTAGTA
GGCAGGCTGGTTGGTGGAACAATGGAACAGCAAAATAAGGCTGCTTTCGAGATTCGTTTG
CTCACTAAAACAAGCATTTTTAACAGGTCTTGTTTGGTGGAAGCTGGTGTAATCCCACCT
CTTCTGAATCTTGTTACTTCAAGGGATTCTTCTTGTCAAGAGAATTCAATGGCTACTCTG
CTGAACCTCTCAAAGAACTCTAAATGCAAAAGCACAATTGTTGGAAATGGAGGTTTGTTC
TTGATACTTGATGTGTTGAAAGGAGGGCTAAAGATGGAAGCTCGACAGCACGCAGCTGGT
ACATTATTCTACCTTACATCAGTAGAAGAGTACCGTAAAATGATGGGAGAAAATCCAGAG
TTCATTCCATCACTTTTGGAGTTGCTAAGAAATGGCACTGACAGAGGAAAAAAGAATGCC
TTGGTCACCATTTTTGGCCTCCTAATGCGCCCCGAAAACCACTGGAGAGTGATTGCTGCT
GGATTAGTCCCCTTGGTGGTTAATCTGTTGAAATCTTTCGAAAGGGAAGATCTCATTACA
GATTCTTTAGCAGTTTTAACAACGCTTTCTGAAAGGCTAGACGGAGCAATGGCTGTTCTT
TATGCTGGAGCTTTGCCTATTATTGTCAATGTTCTAAGTTCTTGCAATTCAAGGGCATCA
AAAGAGTACTGTGTCTCATTGTTGCTGGCTTTGTGTATCAATGGTGGAGCAGATGCAGTT
CCTGTTTTAGTAAAGAACTCATCTCTCATGGGACCGTTATATTCCCTCCTGGCTGAAGGC
AACTCAAAAGCAAGCAAGAAAGCTAGTACACTCATCAGAATCTTGCACGAGTACAACGAG
AAGACCTCATCTGGCTTGATCACTCCAGTTTTTATAGAGGATCAATTCATTAATGTATGG
TAA

Peptide Sequence

PEP ID

PGSC0003DMP400067536
PEP Infomation

pacid=37442648 transcript=PGSC0003DMT400095861 locus=PGSC0003DMG400045432 ID=PGSC0003DMT400095861.v4.03 annot-version=v4.03
Sequence

MLARAVAVALDVLPLKEMDVSVEGQEVVEFVRNQAVKLKFEVEMDDGRMQVNVLKILDQL
ENEVIPETRDLKRVLDSLGITRWSACNREVKFLDNEMLLEGNTEEKRDMGILSSLMGFMI
YCRGTLFEVLDNGAGRQINGGSTNADQVIRFLNLDDFRCPITLEIMSEPVTIASGHTYDR
ASILKWFRAGNSTCPKTGERLTSIDLVPNFALKVLIKQYCSANGIPFVETGRRNRDAGRF
VGSSSVANEQAMKLLASFLVGRLVGGTMEQQNKAAFEIRLLTKTSIFNRSCLVEAGVIPP
LLNLVTSRDSSCQENSMATLLNLSKNSKCKSTIVGNGGLFLILDVLKGGLKMEARQHAAG
TLFYLTSVEEYRKMMGENPEFIPSLLELLRNGTDRGKKNALVTIFGLLMRPENHWRVIAA
GLVPLVVNLLKSFEREDLITDSLAVLTTLSERLDGAMAVLYAGALPIIVNVLSSCNSRAS
KEYCVSLLLALCINGGADAVPVLVKNSSLMGPLYSLLAEGNSKASKKASTLIRILHEYNE
KTSSGLITPVFIEDQFINVW*

Transcript Sequence

Transcript ID

PGSC0003DMT400095861
Transcript Infomation

pacid=37442648 locus=PGSC0003DMG400045432 ID=PGSC0003DMT400095861.v4.03 annot-version=v4.03
Sequence

ATGCTGGCAAGAGCTGTTGCTGTGGCACTTGATGTTCTTCCTTTGAAGGAAATGGATGTT
TCTGTGGAGGGTCAAGAAGTGGTTGAGTTTGTGAGGAATCAAGCTGTTAAGTTGAAGTTT
GAAGTGGAAATGGATGATGGGAGAATGCAAGTGAATGTTTTGAAGATTTTGGATCAACTT
GAAAATGAAGTTATTCCAGAAACGCGTGATCTGAAAAGGGTTCTTGATTCTTTAGGGATT
ACACGTTGGAGCGCGTGTAATAGAGAAGTTAAGTTCTTGGATAATGAGATGTTGTTGGAG
GGGAATACTGAGGAGAAGAGAGATATGGGAATCCTTAGTAGCTTAATGGGGTTCATGATA
TACTGCAGGGGAACTCTGTTTGAAGTATTGGATAATGGAGCAGGCAGACAAATCAATGGA
GGCAGTACTAATGCAGATCAAGTCATCAGGTTCTTGAATCTTGATGATTTCAGGTGTCCA
ATTACACTTGAAATCATGAGTGAGCCAGTGACAATAGCCTCAGGTCACACATATGATCGG
GCTTCGATTCTGAAATGGTTCAGAGCTGGAAACTCCACTTGTCCAAAGACTGGTGAGAGG
TTAACAAGTATTGATTTGGTTCCTAATTTTGCTTTGAAGGTTTTAATCAAGCAGTATTGC
TCCGCGAATGGTATTCCATTTGTGGAGACTGGTAGGCGAAATCGTGATGCTGGAAGATTT
GTTGGTTCAAGCAGTGTGGCTAATGAGCAGGCTATGAAGTTGCTTGCAAGTTTTCTAGTA
GGCAGGCTGGTTGGTGGAACAATGGAACAGCAAAATAAGGCTGCTTTCGAGATTCGTTTG
CTCACTAAAACAAGCATTTTTAACAGGTCTTGTTTGGTGGAAGCTGGTGTAATCCCACCT
CTTCTGAATCTTGTTACTTCAAGGGATTCTTCTTGTCAAGAGAATTCAATGGCTACTCTG
CTGAACCTCTCAAAGAACTCTAAATGCAAAAGCACAATTGTTGGAAATGGAGGTTTGTTC
TTGATACTTGATGTGTTGAAAGGAGGGCTAAAGATGGAAGCTCGACAGCACGCAGCTGGT
ACATTATTCTACCTTACATCAGTAGAAGAGTACCGTAAAATGATGGGAGAAAATCCAGAG
TTCATTCCATCACTTTTGGAGTTGCTAAGAAATGGCACTGACAGAGGAAAAAAGAATGCC
TTGGTCACCATTTTTGGCCTCCTAATGCGCCCCGAAAACCACTGGAGAGTGATTGCTGCT
GGATTAGTCCCCTTGGTGGTTAATCTGTTGAAATCTTTCGAAAGGGAAGATCTCATTACA
GATTCTTTAGCAGTTTTAACAACGCTTTCTGAAAGGCTAGACGGAGCAATGGCTGTTCTT
TATGCTGGAGCTTTGCCTATTATTGTCAATGTTCTAAGTTCTTGCAATTCAAGGGCATCA
AAAGAGTACTGTGTCTCATTGTTGCTGGCTTTGTGTATCAATGGTGGAGCAGATGCAGTT
CCTGTTTTAGTAAAGAACTCATCTCTCATGGGACCGTTATATTCCCTCCTGGCTGAAGGC
AACTCAAAAGCAAGCAAGAAAGCTAGTACACTCATCAGAATCTTGCACGAGTACAACGAG
AAGACCTCATCTGGCTTGATCACTCCAGTTTTTATAGAGGATCAATTCATTAATGTATGG
TAA