Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400095799
CDS Infomation

pacid=37442092 polypeptide=PGSC0003DMP400067474 locus=PGSC0003DMG400045370 ID=PGSC0003DMT400095799.v4.03 annot-version=v4.03
Sequence

ATGGTGACAAAGCTCAGTATTTTCATTTTGGTTTCCTTAAGTTTATTCTCATTTGGTTTT
GTGGCCTCTAGGGAATTTGGGATTAATCTGAATTCTAGTGCTTCTGGTATTGAATTCCCA
CAACATCCAAGTTTCAATGTTGTTTCTTCTTCCGTTAACTCAGGTTGCAATCATGTAACA
TCGACAAGTATGTTAACCCGAGAAGAACAAACTAGTATTGATAGTCAAGATAAAGACGAT
TTCGCGCAGTCAAAAGAAGCAGTCAAGTTTCATTTAAGGCATAGATCAGATGGTAAAACT
ACAGAGGTTAAAGACTCTGTTTTTGAGTCCACGTCAAGGGATTTAGGTAGAATTCAGACA
TTGCATACAAGGATTGTTGAGAAAAAGAATCAAAACTCTGTTTCAAGATTGGCGAAAGAC
GGTGAAAAAACTGTCATTTCTTCACAATTTGAGCTTTCAGGCAAACTTATGGCGACGTTG
GAGTCAGGGGTGAGTCATGGATCAGGGGAATATTTCATGGATGTTTTTGTTGGTACACCT
CCTAAGCACTTCTCTTTGATTCTTGATACTGGTAGTGATCTTAATTGGATTCAATGTGTA
CCTTGTTACGATTGTTTCGAACAAAATGGTCCTTATTATGATCCTAAAGATTCTACTTCT
TTTACGAATATAACTTGTCATGATCCAATGTGTCATCTTGTTTCATCTCCTGACCCTCCA
CAGCCTTGTAAGACTGAGAATCAAACTTGCCCTTATTACTATTGGTATGGAGATAGCTCG
AATACGACTGGTGATTTCGCGCTTGAGACTTTCTCGGTTAATCTCACAACCCCTAGTGGG
AACTCTGAGATCAAGAAAGTGGAAAATGTGATGTTTGGTTGTGGTCATTGGAATAGAGGC
TTGTTTCATGGTGCTGCAGGTTTGCTAGGACTTGGTAAGGGACCACTTTCGTTTTCGTCT
CAACTTCAATCTTTGTATGGCCATTCTTTTTCGTATTGTCTGGTTAATAGGAATAGCAAC
TCTAGTGTCAGCAGCAAATTAATTTTTGGCGAAGACAAGGAGCTTTTGAAGCATCCGAAC
TTGAACTTCACTTCATTAGTTGATGGGAAAGAAAATCCTGCAGAAACGTTCTATTATGTG
CAGATCAAATCAATCATAGTTGGAGACGAAGTGCTAAAGATACCGGAGGAGACATGGAAT
TTGTCTCCACAAGGTGTTGGTGGCACAATCATTGATTCAGGAACCACTTTGAGCTATTTC
ATCGAACCAGCATATGAGATTATAAAAGAGGCATTTGTTAACAAAGTGAAAGGCTATCCA
TTAATACAAGATTTTCCCATTCTTAGACCATGTTACAATGTGTCTGGAGTGGAGAATCTT
GAATTACCTTCATTTGGGATAACTTTTAGTGATGGAGCTGTATGGAATTTCCCGGTCGAG
AACTACTTCATCAAACTTGATCCAGAAGACATTGTTTGTTTAGCAATTCTGGGTACTCCT
AACTCTGCCATGTCAATAATTGGTAACTACCAACAACAGAATTTTCATATCTTATATGAT
ACAAAAAGGTCTAGGCTGGGATATGCACCAACAAAATGTGCTGATGCCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400067474
PEP Infomation

pacid=37442092 transcript=PGSC0003DMT400095799 locus=PGSC0003DMG400045370 ID=PGSC0003DMT400095799.v4.03 annot-version=v4.03
Sequence

MVTKLSIFILVSLSLFSFGFVASREFGINLNSSASGIEFPQHPSFNVVSSSVNSGCNHVT
STSMLTREEQTSIDSQDKDDFAQSKEAVKFHLRHRSDGKTTEVKDSVFESTSRDLGRIQT
LHTRIVEKKNQNSVSRLAKDGEKTVISSQFELSGKLMATLESGVSHGSGEYFMDVFVGTP
PKHFSLILDTGSDLNWIQCVPCYDCFEQNGPYYDPKDSTSFTNITCHDPMCHLVSSPDPP
QPCKTENQTCPYYYWYGDSSNTTGDFALETFSVNLTTPSGNSEIKKVENVMFGCGHWNRG
LFHGAAGLLGLGKGPLSFSSQLQSLYGHSFSYCLVNRNSNSSVSSKLIFGEDKELLKHPN
LNFTSLVDGKENPAETFYYVQIKSIIVGDEVLKIPEETWNLSPQGVGGTIIDSGTTLSYF
IEPAYEIIKEAFVNKVKGYPLIQDFPILRPCYNVSGVENLELPSFGITFSDGAVWNFPVE
NYFIKLDPEDIVCLAILGTPNSAMSIIGNYQQQNFHILYDTKRSRLGYAPTKCADA*

Transcript Sequence

Transcript ID

PGSC0003DMT400095799
Transcript Infomation

pacid=37442092 locus=PGSC0003DMG400045370 ID=PGSC0003DMT400095799.v4.03 annot-version=v4.03
Sequence

ATGGTGACAAAGCTCAGTATTTTCATTTTGGTTTCCTTAAGTTTATTCTCATTTGGTTTT
GTGGCCTCTAGGGAATTTGGGATTAATCTGAATTCTAGTGCTTCTGGTATTGAATTCCCA
CAACATCCAAGTTTCAATGTTGTTTCTTCTTCCGTTAACTCAGGTTGCAATCATGTAACA
TCGACAAGTATGTTAACCCGAGAAGAACAAACTAGTATTGATAGTCAAGATAAAGACGAT
TTCGCGCAGTCAAAAGAAGCAGTCAAGTTTCATTTAAGGCATAGATCAGATGGTAAAACT
ACAGAGGTTAAAGACTCTGTTTTTGAGTCCACGTCAAGGGATTTAGGTAGAATTCAGACA
TTGCATACAAGGATTGTTGAGAAAAAGAATCAAAACTCTGTTTCAAGATTGGCGAAAGAC
GGTGAAAAAACTGTCATTTCTTCACAATTTGAGCTTTCAGGCAAACTTATGGCGACGTTG
GAGTCAGGGGTGAGTCATGGATCAGGGGAATATTTCATGGATGTTTTTGTTGGTACACCT
CCTAAGCACTTCTCTTTGATTCTTGATACTGGTAGTGATCTTAATTGGATTCAATGTGTA
CCTTGTTACGATTGTTTCGAACAAAATGGTCCTTATTATGATCCTAAAGATTCTACTTCT
TTTACGAATATAACTTGTCATGATCCAATGTGTCATCTTGTTTCATCTCCTGACCCTCCA
CAGCCTTGTAAGACTGAGAATCAAACTTGCCCTTATTACTATTGGTATGGAGATAGCTCG
AATACGACTGGTGATTTCGCGCTTGAGACTTTCTCGGTTAATCTCACAACCCCTAGTGGG
AACTCTGAGATCAAGAAAGTGGAAAATGTGATGTTTGGTTGTGGTCATTGGAATAGAGGC
TTGTTTCATGGTGCTGCAGGTTTGCTAGGACTTGGTAAGGGACCACTTTCGTTTTCGTCT
CAACTTCAATCTTTGTATGGCCATTCTTTTTCGTATTGTCTGGTTAATAGGAATAGCAAC
TCTAGTGTCAGCAGCAAATTAATTTTTGGCGAAGACAAGGAGCTTTTGAAGCATCCGAAC
TTGAACTTCACTTCATTAGTTGATGGGAAAGAAAATCCTGCAGAAACGTTCTATTATGTG
CAGATCAAATCAATCATAGTTGGAGACGAAGTGCTAAAGATACCGGAGGAGACATGGAAT
TTGTCTCCACAAGGTGTTGGTGGCACAATCATTGATTCAGGAACCACTTTGAGCTATTTC
ATCGAACCAGCATATGAGATTATAAAAGAGGCATTTGTTAACAAAGTGAAAGGCTATCCA
TTAATACAAGATTTTCCCATTCTTAGACCATGTTACAATGTGTCTGGAGTGGAGAATCTT
GAATTACCTTCATTTGGGATAACTTTTAGTGATGGAGCTGTATGGAATTTCCCGGTCGAG
AACTACTTCATCAAACTTGATCCAGAAGACATTGTTTGTTTAGCAATTCTGGGTACTCCT
AACTCTGCCATGTCAATAATTGGTAACTACCAACAACAGAATTTTCATATCTTATATGAT
ACAAAAAGGTCTAGGCTGGGATATGCACCAACAAAATGTGCTGATGCCTGA