Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400095664
CDS Infomation

pacid=37467606 polypeptide=PGSC0003DMP400067339 locus=PGSC0003DMG400045235 ID=PGSC0003DMT400095664.v4.03 annot-version=v4.03
Sequence

ATGGGGGTTTGGAAGGATTCCAACTATGGGAAAGGCGTGATCATCGGAGTTATAGACACT
GGAATTCTTCCTGACCATCCTTCGTTTAGTGACGTTGGGATGCCTCCTCCGCCTGCTAAG
TGGAAAGGAGTTTGTGAGTCCAACTTCATCAACAAGTGTAACAACAAGCTCATTGGAGCA
AGGTCCTACCAACTTGGCAATGGTTCCCCGATAGATGGTAATGGACATGGTACACACACA
GCAAGCACAGCTGCGGGAGCCTTTGTGAAAGGTGCTAATGTATTTGGGAATGCTAATGGG
ACTGCTGTTGGTGTTGCCCCTCTTGCCCATATTGCCGTATATAAGGTATGTAGTTCTGAT
GGCGGTTGTTCTGACAGTGATATTTTAGCTGCCATGGATTCAGCCATAGATGATGGGGTA
GATGTTCTTTCAATCTCCCTTGGTGGATCTCCCAACTCTTTCTATGATGACCCTATTGCT
CTTGGGGCGTACAGTGCAACGGCAAGAGGTATTCTTGTAAGTTGTTCTGCAGGTAATAGA
GGTCCTTTGCTTGCCTCAGTTGGAAATGCAGCCCCGTGGATTCTTACTGTAGGTGCCAGC
ACGCTTGATAGAAAGATAAAAGCTACTGTTAAGCTTGGAAATGGAGAGGAATTTGAAGGA
GAATCTGCTTATCGTCCACAGATTTCCAACTCAACATTCTTCACTCTATTTGATGCTGCA
AAACATGCAAAAGATCAATCGGAAACCCCTTATTGCAAACCAGGGTCACTCAATGACCCT
GTTATAAGAGGAAAGATAGTATTATGTCTAGCAGGCGGTGGCGTCGGCGGTGGCGTAGCC
AATGTTGATAAAGGACAAGTTGTGAAGGATGCTGGAGGTGTTGGCATGATTGTCATCAAA
ACATCACAATATGGTGTCACAAAATCAGCTGATGCTCATGTTCTTCCCGCATTGGATGTT
TCAGATGCAGATGGATTAAGAATTCGTGCTTATACAAACTCAACAATTAACTCTGTTGCT
ACAATCACATTCCAAGGAACAATAATTGGAGATAAAAATGCTCCAATTGTTGCTGCATTT
TCTTCTCGCGGACCAAGTAGAGCTAGTCCTGGAATCTTGAAACCTGACATAATCGGTCCT
GGTGTTAATATCCTTGCTTCTTGGACTACCTCCGTGGATGACAACAAGAACACCAAATCC
ACATTCAATATTATATCAGGCACCTCAATGTCTTGCCCTCACCTTAGTGGTGTAGCAGCT
CTGCTGAAGAGCTCACATCCTGATTGGTCTCCAGCTGTTATTAAGTCTGCAATCATGACG
ACCGCTGACACGTTAAACCTTGCCAATAGTCCAATACTAGACGAAAGGCTCATTCCTGCT
TACATCTTTGCAGTTGGTGCAGGACATGTTAATCCATCGAGGGCAAATGATCCAGGACTA
GTTTATGATACCCCATTTGAGGACTATGTACCTTATTTTTGTGGTTTAAACTATACCAAT
CGAGAGGTAGGTAAAATGTTACAACGTCAGGTGAATTGTTTGAAGGTGAAAAGTATCCCT
GAAGCACAATTAAACTATCCTTCATTTTCCATATTCAGACTTGGATCAACTCCTCAAACA
TATACCAGAACTGTGACCAACGTTGGTGACGCAACATCATCTTACGAAGTGGAGGTAGCT
TCACCAAAAGGCGTTGTCGTGGAAGTTAAACCCACAGAGCTAAATTTCTCCGAGTTGAAC
CAGAAGTTATCATACCAAGTGACATTTTCCAAGACAACCAACAACTCAAACTTTGTGATT
GTTGGGGGTTTCTTGAAGTGGACTTCTAATAGGCACTCAGTGAGAAGTCCAATTGCAATT
GTGTTAGACAAGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400067339
PEP Infomation

pacid=37467606 transcript=PGSC0003DMT400095664 locus=PGSC0003DMG400045235 ID=PGSC0003DMT400095664.v4.03 annot-version=v4.03
Sequence

MGVWKDSNYGKGVIIGVIDTGILPDHPSFSDVGMPPPPAKWKGVCESNFINKCNNKLIGA
RSYQLGNGSPIDGNGHGTHTASTAAGAFVKGANVFGNANGTAVGVAPLAHIAVYKVCSSD
GGCSDSDILAAMDSAIDDGVDVLSISLGGSPNSFYDDPIALGAYSATARGILVSCSAGNR
GPLLASVGNAAPWILTVGASTLDRKIKATVKLGNGEEFEGESAYRPQISNSTFFTLFDAA
KHAKDQSETPYCKPGSLNDPVIRGKIVLCLAGGGVGGGVANVDKGQVVKDAGGVGMIVIK
TSQYGVTKSADAHVLPALDVSDADGLRIRAYTNSTINSVATITFQGTIIGDKNAPIVAAF
SSRGPSRASPGILKPDIIGPGVNILASWTTSVDDNKNTKSTFNIISGTSMSCPHLSGVAA
LLKSSHPDWSPAVIKSAIMTTADTLNLANSPILDERLIPAYIFAVGAGHVNPSRANDPGL
VYDTPFEDYVPYFCGLNYTNREVGKMLQRQVNCLKVKSIPEAQLNYPSFSIFRLGSTPQT
YTRTVTNVGDATSSYEVEVASPKGVVVEVKPTELNFSELNQKLSYQVTFSKTTNNSNFVI
VGGFLKWTSNRHSVRSPIAIVLDK*

Transcript Sequence

Transcript ID

PGSC0003DMT400095664
Transcript Infomation

pacid=37467606 locus=PGSC0003DMG400045235 ID=PGSC0003DMT400095664.v4.03 annot-version=v4.03
Sequence

ATGGGGGTTTGGAAGGATTCCAACTATGGGAAAGGCGTGATCATCGGAGTTATAGACACT
GGAATTCTTCCTGACCATCCTTCGTTTAGTGACGTTGGGATGCCTCCTCCGCCTGCTAAG
TGGAAAGGAGTTTGTGAGTCCAACTTCATCAACAAGTGTAACAACAAGCTCATTGGAGCA
AGGTCCTACCAACTTGGCAATGGTTCCCCGATAGATGGTAATGGACATGGTACACACACA
GCAAGCACAGCTGCGGGAGCCTTTGTGAAAGGTGCTAATGTATTTGGGAATGCTAATGGG
ACTGCTGTTGGTGTTGCCCCTCTTGCCCATATTGCCGTATATAAGGTATGTAGTTCTGAT
GGCGGTTGTTCTGACAGTGATATTTTAGCTGCCATGGATTCAGCCATAGATGATGGGGTA
GATGTTCTTTCAATCTCCCTTGGTGGATCTCCCAACTCTTTCTATGATGACCCTATTGCT
CTTGGGGCGTACAGTGCAACGGCAAGAGGTATTCTTGTAAGTTGTTCTGCAGGTAATAGA
GGTCCTTTGCTTGCCTCAGTTGGAAATGCAGCCCCGTGGATTCTTACTGTAGGTGCCAGC
ACGCTTGATAGAAAGATAAAAGCTACTGTTAAGCTTGGAAATGGAGAGGAATTTGAAGGA
GAATCTGCTTATCGTCCACAGATTTCCAACTCAACATTCTTCACTCTATTTGATGCTGCA
AAACATGCAAAAGATCAATCGGAAACCCCTTATTGCAAACCAGGGTCACTCAATGACCCT
GTTATAAGAGGAAAGATAGTATTATGTCTAGCAGGCGGTGGCGTCGGCGGTGGCGTAGCC
AATGTTGATAAAGGACAAGTTGTGAAGGATGCTGGAGGTGTTGGCATGATTGTCATCAAA
ACATCACAATATGGTGTCACAAAATCAGCTGATGCTCATGTTCTTCCCGCATTGGATGTT
TCAGATGCAGATGGATTAAGAATTCGTGCTTATACAAACTCAACAATTAACTCTGTTGCT
ACAATCACATTCCAAGGAACAATAATTGGAGATAAAAATGCTCCAATTGTTGCTGCATTT
TCTTCTCGCGGACCAAGTAGAGCTAGTCCTGGAATCTTGAAACCTGACATAATCGGTCCT
GGTGTTAATATCCTTGCTTCTTGGACTACCTCCGTGGATGACAACAAGAACACCAAATCC
ACATTCAATATTATATCAGGCACCTCAATGTCTTGCCCTCACCTTAGTGGTGTAGCAGCT
CTGCTGAAGAGCTCACATCCTGATTGGTCTCCAGCTGTTATTAAGTCTGCAATCATGACG
ACCGCTGACACGTTAAACCTTGCCAATAGTCCAATACTAGACGAAAGGCTCATTCCTGCT
TACATCTTTGCAGTTGGTGCAGGACATGTTAATCCATCGAGGGCAAATGATCCAGGACTA
GTTTATGATACCCCATTTGAGGACTATGTACCTTATTTTTGTGGTTTAAACTATACCAAT
CGAGAGGTAGGTAAAATGTTACAACGTCAGGTGAATTGTTTGAAGGTGAAAAGTATCCCT
GAAGCACAATTAAACTATCCTTCATTTTCCATATTCAGACTTGGATCAACTCCTCAAACA
TATACCAGAACTGTGACCAACGTTGGTGACGCAACATCATCTTACGAAGTGGAGGTAGCT
TCACCAAAAGGCGTTGTCGTGGAAGTTAAACCCACAGAGCTAAATTTCTCCGAGTTGAAC
CAGAAGTTATCATACCAAGTGACATTTTCCAAGACAACCAACAACTCAAACTTTGTGATT
GTTGGGGGTTTCTTGAAGTGGACTTCTAATAGGCACTCAGTGAGAAGTCCAATTGCAATT
GTGTTAGACAAGTGA