Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400095523
CDS Infomation

pacid=37463771 polypeptide=PGSC0003DMP400067198 locus=PGSC0003DMG400045094 ID=PGSC0003DMT400095523.v4.03 annot-version=v4.03
Sequence

ATGGAGGATGTTGATAGACAATGTTGGTCTAATACTCCAACAGATATATTCAGATTAATC
TCATCACGTCTTGTTGCTGGTGAATATGTTGTTTTTCGTGCTGTTTGTAAGAATTGGCGC
TTGTCTCTGCCTGAACTACATGAATATAGTTATAATTCTCCGTTTTCTTGTATTAATTCA
CCATGTTTGATAAGGTTATATGAGGAAAGTGGTGACGTAGAATTGTTTCATCCATTGTAC
AATGCACAAATGATTCAGAAGATGGATATACCTGAGTTAAGGGGTTCACGAATTCGATGT
GCAGTAAAGGATTGGTTGCTCATGAGCAAAGGCAAATTTGGCATGTTCTTTTTCAATCCA
ATTACTAAAGTTATAATTAAACTACCCGATTTACTAGAGACGGATGAAAATTTATTCCCC
TCATGGACGTTTTCGTGTTCTCCAGACTCATCGTCATCGGATTGTTTTGTGGTTGGTTTT
TTCTTTTGTGGTTCTCCCCCAATGGTATACATGATCAAAGTTGGAGAGAGTAGATGGACT
CTTCATGACTACTATGATGAAGACGAAGAAGAACGTTACAAAGGAATAAATTTTATGCCT
AATAATCCGGTATATTCTAAAAATAATAATATTGTTTATATGTTGGGACATAAAGGAACT
CTGGGAATATTAAGGATCAACGGAAACTCAACTACAGATACTCCTACTTGGGAATTTCAC
GGGAAGAAATTGTCACATCGGAAACAAATTTCAATTCAACAGGTTTTCACAGCAGAAGAC
ACTGATAACGGAGGAATATTAGTTGTGTTTGTAACTCATGAAGAAGGAGAAGTAGATATT
TGGAGGTACAAAATGAACGGAGAGGAATTGAAGAAAGAAAGAGTAACAAGTTTAGAGAAT
AAAACTCTGTTTGTCAGCTTTGGAGTTTCGTTTTTGAGATCATGTGTCGCGCAGGGATTA
GAAAACAAGATTTATTTTCCAATGTTTCATGATAACAATAAAGGAGTTTTCTATTGTTTG
GTCAAACACAAATATTACTCTTTCGATTACTCAAGCCCTAATTGTTTCAACTTGGTTCAA
CCAATACTTAGCTTTTGGATTCAACCCTCATGA

Peptide Sequence

PEP ID

PGSC0003DMP400067198
PEP Infomation

pacid=37463771 transcript=PGSC0003DMT400095523 locus=PGSC0003DMG400045094 ID=PGSC0003DMT400095523.v4.03 annot-version=v4.03
Sequence

MEDVDRQCWSNTPTDIFRLISSRLVAGEYVVFRAVCKNWRLSLPELHEYSYNSPFSCINS
PCLIRLYEESGDVELFHPLYNAQMIQKMDIPELRGSRIRCAVKDWLLMSKGKFGMFFFNP
ITKVIIKLPDLLETDENLFPSWTFSCSPDSSSSDCFVVGFFFCGSPPMVYMIKVGESRWT
LHDYYDEDEEERYKGINFMPNNPVYSKNNNIVYMLGHKGTLGILRINGNSTTDTPTWEFH
GKKLSHRKQISIQQVFTAEDTDNGGILVVFVTHEEGEVDIWRYKMNGEELKKERVTSLEN
KTLFVSFGVSFLRSCVAQGLENKIYFPMFHDNNKGVFYCLVKHKYYSFDYSSPNCFNLVQ
PILSFWIQPS*

Transcript Sequence

Transcript ID

PGSC0003DMT400095523
Transcript Infomation

pacid=37463771 locus=PGSC0003DMG400045094 ID=PGSC0003DMT400095523.v4.03 annot-version=v4.03
Sequence

ATGGAGGATGTTGATAGACAATGTTGGTCTAATACTCCAACAGATATATTCAGATTAATC
TCATCACGTCTTGTTGCTGGTGAATATGTTGTTTTTCGTGCTGTTTGTAAGAATTGGCGC
TTGTCTCTGCCTGAACTACATGAATATAGTTATAATTCTCCGTTTTCTTGTATTAATTCA
CCATGTTTGATAAGGTTATATGAGGAAAGTGGTGACGTAGAATTGTTTCATCCATTGTAC
AATGCACAAATGATTCAGAAGATGGATATACCTGAGTTAAGGGGTTCACGAATTCGATGT
GCAGTAAAGGATTGGTTGCTCATGAGCAAAGGCAAATTTGGCATGTTCTTTTTCAATCCA
ATTACTAAAGTTATAATTAAACTACCCGATTTACTAGAGACGGATGAAAATTTATTCCCC
TCATGGACGTTTTCGTGTTCTCCAGACTCATCGTCATCGGATTGTTTTGTGGTTGGTTTT
TTCTTTTGTGGTTCTCCCCCAATGGTATACATGATCAAAGTTGGAGAGAGTAGATGGACT
CTTCATGACTACTATGATGAAGACGAAGAAGAACGTTACAAAGGAATAAATTTTATGCCT
AATAATCCGGTATATTCTAAAAATAATAATATTGTTTATATGTTGGGACATAAAGGAACT
CTGGGAATATTAAGGATCAACGGAAACTCAACTACAGATACTCCTACTTGGGAATTTCAC
GGGAAGAAATTGTCACATCGGAAACAAATTTCAATTCAACAGGTTTTCACAGCAGAAGAC
ACTGATAACGGAGGAATATTAGTTGTGTTTGTAACTCATGAAGAAGGAGAAGTAGATATT
TGGAGGTACAAAATGAACGGAGAGGAATTGAAGAAAGAAAGAGTAACAAGTTTAGAGAAT
AAAACTCTGTTTGTCAGCTTTGGAGTTTCGTTTTTGAGATCATGTGTCGCGCAGGGATTA
GAAAACAAGATTTATTTTCCAATGTTTCATGATAACAATAAAGGAGTTTTCTATTGTTTG
GTCAAACACAAATATTACTCTTTCGATTACTCAAGCCCTAATTGTTTCAACTTGGTTCAA
CCAATACTTAGCTTTTGGATTCAACCCTCATGA