Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400094874
CDS Infomation

pacid=37477168 polypeptide=PGSC0003DMP400066549 locus=PGSC0003DMG400044445 ID=PGSC0003DMT400094874.v4.03 annot-version=v4.03
Sequence

ATGTTTTCATGTCGATACAGACCATTTATTCACAAATTATATTTTCCATTTTCTCTCCAA
AGATCAAATCTTGGAACCCCATCATCTCCATTTTCATCATCTCAAATCCAAAATTCAGAT
TGGTTAAGCTCAAATGAAGTTATCAAGATTTTCCAAAATCTCAAAAACGCAAATTCAGCT
CTAACTCTACTCAATCAAATCTCAAATCGAAAAGATTACAGACCCAATGAAGCCATTTAT
AGTGTAGTTGTCAAGAACTTAGCAATTGCTAAGAATTTTGATGCAATTGAATCCCTTATG
GAGAAAATCAAAATCGAAAGGAAATGTAGACTTTCTGATGAGTTTTTCTATAATGTTATT
AAGATTTATGGGCATTTAGCTGGTAGAATTAACAGAGCAATTGATACCTTTTTCGATATG
CCTAATTATAAGTGTTTTCCCAGTGTGAAAACTTTCAATTTTTTACTGAATTTGCTTGTG
AATACTAAGCAATTTGATGTTGTTCATAAGGTTTACCTTCGTGGTTCCGAGTTGGGTGTT
GAGATTGATGCTTGTTGTTTGAATATAATCATTAAAGGACTTTGTCGTTGTGGAGAGATA
GCTGCTGCATATAAGGTGTTTGATGAATTTCCTAAACAGAATTGTTCACCCAATGTTAGA
ACTTTTTCTACTATAATGCATGCATTATGTGATCATGGTCGCGTTGATGAGGCATTGAGT
TTGTTAGAGAGGATGGAGAATGAGGATGTTGAACCAGATGCCATCGTGTTTAACACGTTG
ATATCAGGGCTAAGGAAGCAAAGGCGAGTTGACGAGGGGATTGATATGTTCAAGAAAGTA
ATGCTGAAAGGTTGTGATCCGAATCCAGGGACTTATCAGGAGGTGTTGTATGCTTTGCTT
GATGCTAAGAGGTATTTGGAGGCGAAAGATTTCATGGCTGTAATGATCGATAAGAGAGTG
AATCCAAGTTTCGAGTCTTATAAGGTGATAGTACATGGCCTTTGTGATGGTAAGCTTGTT
GGAGATTTAGACTGGGTATTGAAGCAAATGATGAGACATGGATTCGTTCCGAGGATGGGT
ATGTGGAGGAAGATTCTTGGTTGCTTGTTTCCTGATGGAGGTTGTTGTACTACCTATACT
TACGATGAGATTCTTGCAGACTAA

Peptide Sequence

PEP ID

PGSC0003DMP400066549
PEP Infomation

pacid=37477168 transcript=PGSC0003DMT400094874 locus=PGSC0003DMG400044445 ID=PGSC0003DMT400094874.v4.03 annot-version=v4.03
Sequence

MFSCRYRPFIHKLYFPFSLQRSNLGTPSSPFSSSQIQNSDWLSSNEVIKIFQNLKNANSA
LTLLNQISNRKDYRPNEAIYSVVVKNLAIAKNFDAIESLMEKIKIERKCRLSDEFFYNVI
KIYGHLAGRINRAIDTFFDMPNYKCFPSVKTFNFLLNLLVNTKQFDVVHKVYLRGSELGV
EIDACCLNIIIKGLCRCGEIAAAYKVFDEFPKQNCSPNVRTFSTIMHALCDHGRVDEALS
LLERMENEDVEPDAIVFNTLISGLRKQRRVDEGIDMFKKVMLKGCDPNPGTYQEVLYALL
DAKRYLEAKDFMAVMIDKRVNPSFESYKVIVHGLCDGKLVGDLDWVLKQMMRHGFVPRMG
MWRKILGCLFPDGGCCTTYTYDEILAD*

Transcript Sequence

Transcript ID

PGSC0003DMT400094874
Transcript Infomation

pacid=37477168 locus=PGSC0003DMG400044445 ID=PGSC0003DMT400094874.v4.03 annot-version=v4.03
Sequence

ATGTTTTCATGTCGATACAGACCATTTATTCACAAATTATATTTTCCATTTTCTCTCCAA
AGATCAAATCTTGGAACCCCATCATCTCCATTTTCATCATCTCAAATCCAAAATTCAGAT
TGGTTAAGCTCAAATGAAGTTATCAAGATTTTCCAAAATCTCAAAAACGCAAATTCAGCT
CTAACTCTACTCAATCAAATCTCAAATCGAAAAGATTACAGACCCAATGAAGCCATTTAT
AGTGTAGTTGTCAAGAACTTAGCAATTGCTAAGAATTTTGATGCAATTGAATCCCTTATG
GAGAAAATCAAAATCGAAAGGAAATGTAGACTTTCTGATGAGTTTTTCTATAATGTTATT
AAGATTTATGGGCATTTAGCTGGTAGAATTAACAGAGCAATTGATACCTTTTTCGATATG
CCTAATTATAAGTGTTTTCCCAGTGTGAAAACTTTCAATTTTTTACTGAATTTGCTTGTG
AATACTAAGCAATTTGATGTTGTTCATAAGGTTTACCTTCGTGGTTCCGAGTTGGGTGTT
GAGATTGATGCTTGTTGTTTGAATATAATCATTAAAGGACTTTGTCGTTGTGGAGAGATA
GCTGCTGCATATAAGGTGTTTGATGAATTTCCTAAACAGAATTGTTCACCCAATGTTAGA
ACTTTTTCTACTATAATGCATGCATTATGTGATCATGGTCGCGTTGATGAGGCATTGAGT
TTGTTAGAGAGGATGGAGAATGAGGATGTTGAACCAGATGCCATCGTGTTTAACACGTTG
ATATCAGGGCTAAGGAAGCAAAGGCGAGTTGACGAGGGGATTGATATGTTCAAGAAAGTA
ATGCTGAAAGGTTGTGATCCGAATCCAGGGACTTATCAGGAGGTGTTGTATGCTTTGCTT
GATGCTAAGAGGTATTTGGAGGCGAAAGATTTCATGGCTGTAATGATCGATAAGAGAGTG
AATCCAAGTTTCGAGTCTTATAAGGTGATAGTACATGGCCTTTGTGATGGTAAGCTTGTT
GGAGATTTAGACTGGGTATTGAAGCAAATGATGAGACATGGATTCGTTCCGAGGATGGGT
ATGTGGAGGAAGATTCTTGGTTGCTTGTTTCCTGATGGAGGTTGTTGTACTACCTATACT
TACGATGAGATTCTTGCAGACTAA