Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400094124
CDS Infomation

pacid=37448351 polypeptide=PGSC0003DMP400065799 locus=PGSC0003DMG400043695 ID=PGSC0003DMT400094124.v4.03 annot-version=v4.03
Sequence

ATGCCGGCCATACATTCCCGTCCGTCAAGTAGTATGCCATCATTGGTTGAAAACGATGAA
ACTAATACTGGGGTTCCGCTCGATCAGCCAAGTAACATGATGGATAGTCAACCTAATTCA
ATGGACAGTGGATCAAACACCTCTGACACTGCAATGGCTCAAGAACTTGGTGGTGATGAT
CATCATGATGATCAAGAAGAAGGTGTGAACACTACTAGGAAGCGAAAGCGCTATCATCGC
CACACTCAACATCAGATCCAGGAACTAGAAGCATACTTTAAGGAGTGCCCTCACCCAGAT
GACAAGCAAAGGAAGGAGCTGAGCCGTGAGTTAGGGTTGGAGCATTTGCAGGTCAAGTTT
TGGTTTCAGAACAAAAGAACTCAAATGAAGAATCAACTTGAGAGGCATGAGAACTCACAC
CTTCGTGTGGAAAATGAGAAAATGAAGTCAGAATTGTTGAGGTACAAAGAAGCTTTGGGA
AATATAGGCAATATATCTTGCCCTACTTGTGGTGGCCATCGTATCAACATTGGTGATTTG
TCTTTTGATGAACGCCAATTGAGGAATGAAAATGCAAGACTCAAAGAAGAGATCGAACGT
ATCTCATCTATGGCTGGAAGAATTGTTGGAAAAACTGTATTTCCAAACAACAACAATGGT
TACAACTCTCCCAATCCTGTTGATTTTGGAGTTCTTCCTGCTTACTCGACGCCACAAAGC
GTCGATGGAGAGGGATATAACAATGGAGGTGGTGGATTTGAGGATGTTCCAATTCTAAGT
TCAATGATTAATGGACCAATTAGTGAGATTGAAAAACCCTTTATCATTGAACTTGTTATG
GCAGCTATGGATGAATTTGTTCAAATGGCACATATGCAAGAACCACTTTGGTTCCCTAGC
ATTGAAAATGGAACATTTATGCTGAATCAAGATGAGTATTTTAGGGTTTTTCCAAGGGGA
ATTGGACCTAGACCTATTGGATTTGTTACTGAGGCTACAAGGGATAGTTCTATTGTTATA
ATGAACAATTTCAACCTAGTTGAAATTCTCATGAATGTGAATCATTGGTCCAGTATGTTC
TCTGGTATTGTCTCAAGGGCTTCAAGTGTTGATGTGATATCAACTGGAGGTGCAGGAAAT
CCCAATGGAGCAATACAAGTGATATTAGCTGAAACTCAAATTGCATCTCCACAAGTTCCA
ACTAGGGAATGCTACTTTGCTAGGTATTGCAAGCTCAGAGTTGATGGAACATGGGCAGTT
GTCGATGTTTCATTGGACCAGTTACGCGCTGGTCCAGCTGTTAGGTCTCGAAAAAGGCCA
TCTGGATGCCTTATTGAAGCGGCACCAAATGGATGCTCTAAGGTTACTTGGGTTGAGCAT
GTTGAAGTTGATGATTCAGCAGTGCACACTATTTACAAGCCACTAGTGAGTTCTGGTCTT
GCATTTGGTGCAAAACGTTGGCTTGCTTCTCTTGATAGACAATGTGACCGTATTGCAAGT
GCTATGGTCACACCTATTCCAACCAATGACATGGTGTTATCAACTCAAGAAAGTAGAAAG
AGTATGATGAAATTGGCTGAGAGGATGGTTAATAGTTTTAGCTCTGGAGTGAGTGCAACT
GTTGGTAATCACTGGACAACCTTGTCACAAGGAAATGGAACAGATGAAAATGTTAGAGTT
ATGACTAGGAAAAGTGTTGGTGATCCTGGTAGACCACATGGTGTTGTCATAAGTGCTGCT
ACTTCATTCTGGCTCCCTATTTCTCCGAAAACCGTGTTCGATTACCTCCGTGATGAGAAC
ACGCGTACCGAGTGGGACATTCTGTCCAATGGAGGTCTGCTGCAAGAAGTGGCTCAGATT
ACTAATGGCACTGAGACAGGCAATTGTGTCTCTTTACTGAGGGTTAATAGTGACAATGTT
AACCATAGCAACATGATAATCCTCCAAGAGAGCAGCACAGATCCAACAGGATCCTATGTG
ATCTATGCACCAGTTGATATCAGTGCAATGAATGGTGTGTTGAATGGTGGAGATCCAGAT
TATGTTGCTCTGCTGCCTTCTGGATTCGCCATTCTCCCCGATGGTCCATCAGGAGGCAGG
GGAGCTTATAATCATGGCTCTGGTGGATCTCTGCTGACCGTCGCGTTTCAGATTTTGGTT
GATTTAGTTCCTGTTGCTAAGCTTTCATTGGGTTCAGTTGCTACTGTCAACAATTTGATT
GTTTGCACAGTTGATAGGATCAAGGCTGCTCTCTTAGCACAGCCAACCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400065799
PEP Infomation

pacid=37448351 transcript=PGSC0003DMT400094124 locus=PGSC0003DMG400043695 ID=PGSC0003DMT400094124.v4.03 annot-version=v4.03
Sequence

MPAIHSRPSSSMPSLVENDETNTGVPLDQPSNMMDSQPNSMDSGSNTSDTAMAQELGGDD
HHDDQEEGVNTTRKRKRYHRHTQHQIQELEAYFKECPHPDDKQRKELSRELGLEHLQVKF
WFQNKRTQMKNQLERHENSHLRVENEKMKSELLRYKEALGNIGNISCPTCGGHRINIGDL
SFDERQLRNENARLKEEIERISSMAGRIVGKTVFPNNNNGYNSPNPVDFGVLPAYSTPQS
VDGEGYNNGGGGFEDVPILSSMINGPISEIEKPFIIELVMAAMDEFVQMAHMQEPLWFPS
IENGTFMLNQDEYFRVFPRGIGPRPIGFVTEATRDSSIVIMNNFNLVEILMNVNHWSSMF
SGIVSRASSVDVISTGGAGNPNGAIQVILAETQIASPQVPTRECYFARYCKLRVDGTWAV
VDVSLDQLRAGPAVRSRKRPSGCLIEAAPNGCSKVTWVEHVEVDDSAVHTIYKPLVSSGL
AFGAKRWLASLDRQCDRIASAMVTPIPTNDMVLSTQESRKSMMKLAERMVNSFSSGVSAT
VGNHWTTLSQGNGTDENVRVMTRKSVGDPGRPHGVVISAATSFWLPISPKTVFDYLRDEN
TRTEWDILSNGGLLQEVAQITNGTETGNCVSLLRVNSDNVNHSNMIILQESSTDPTGSYV
IYAPVDISAMNGVLNGGDPDYVALLPSGFAILPDGPSGGRGAYNHGSGGSLLTVAFQILV
DLVPVAKLSLGSVATVNNLIVCTVDRIKAALLAQPT*

Transcript Sequence

Transcript ID

PGSC0003DMT400094124
Transcript Infomation

pacid=37448351 locus=PGSC0003DMG400043695 ID=PGSC0003DMT400094124.v4.03 annot-version=v4.03
Sequence

ATGCCGGCCATACATTCCCGTCCGTCAAGTAGTATGCCATCATTGGTTGAAAACGATGAA
ACTAATACTGGGGTTCCGCTCGATCAGCCAAGTAACATGATGGATAGTCAACCTAATTCA
ATGGACAGTGGATCAAACACCTCTGACACTGCAATGGCTCAAGAACTTGGTGGTGATGAT
CATCATGATGATCAAGAAGAAGGTGTGAACACTACTAGGAAGCGAAAGCGCTATCATCGC
CACACTCAACATCAGATCCAGGAACTAGAAGCATACTTTAAGGAGTGCCCTCACCCAGAT
GACAAGCAAAGGAAGGAGCTGAGCCGTGAGTTAGGGTTGGAGCATTTGCAGGTCAAGTTT
TGGTTTCAGAACAAAAGAACTCAAATGAAGAATCAACTTGAGAGGCATGAGAACTCACAC
CTTCGTGTGGAAAATGAGAAAATGAAGTCAGAATTGTTGAGGTACAAAGAAGCTTTGGGA
AATATAGGCAATATATCTTGCCCTACTTGTGGTGGCCATCGTATCAACATTGGTGATTTG
TCTTTTGATGAACGCCAATTGAGGAATGAAAATGCAAGACTCAAAGAAGAGATCGAACGT
ATCTCATCTATGGCTGGAAGAATTGTTGGAAAAACTGTATTTCCAAACAACAACAATGGT
TACAACTCTCCCAATCCTGTTGATTTTGGAGTTCTTCCTGCTTACTCGACGCCACAAAGC
GTCGATGGAGAGGGATATAACAATGGAGGTGGTGGATTTGAGGATGTTCCAATTCTAAGT
TCAATGATTAATGGACCAATTAGTGAGATTGAAAAACCCTTTATCATTGAACTTGTTATG
GCAGCTATGGATGAATTTGTTCAAATGGCACATATGCAAGAACCACTTTGGTTCCCTAGC
ATTGAAAATGGAACATTTATGCTGAATCAAGATGAGTATTTTAGGGTTTTTCCAAGGGGA
ATTGGACCTAGACCTATTGGATTTGTTACTGAGGCTACAAGGGATAGTTCTATTGTTATA
ATGAACAATTTCAACCTAGTTGAAATTCTCATGAATGTGAATCATTGGTCCAGTATGTTC
TCTGGTATTGTCTCAAGGGCTTCAAGTGTTGATGTGATATCAACTGGAGGTGCAGGAAAT
CCCAATGGAGCAATACAAGTGATATTAGCTGAAACTCAAATTGCATCTCCACAAGTTCCA
ACTAGGGAATGCTACTTTGCTAGGTATTGCAAGCTCAGAGTTGATGGAACATGGGCAGTT
GTCGATGTTTCATTGGACCAGTTACGCGCTGGTCCAGCTGTTAGGTCTCGAAAAAGGCCA
TCTGGATGCCTTATTGAAGCGGCACCAAATGGATGCTCTAAGGTTACTTGGGTTGAGCAT
GTTGAAGTTGATGATTCAGCAGTGCACACTATTTACAAGCCACTAGTGAGTTCTGGTCTT
GCATTTGGTGCAAAACGTTGGCTTGCTTCTCTTGATAGACAATGTGACCGTATTGCAAGT
GCTATGGTCACACCTATTCCAACCAATGACATGGTGTTATCAACTCAAGAAAGTAGAAAG
AGTATGATGAAATTGGCTGAGAGGATGGTTAATAGTTTTAGCTCTGGAGTGAGTGCAACT
GTTGGTAATCACTGGACAACCTTGTCACAAGGAAATGGAACAGATGAAAATGTTAGAGTT
ATGACTAGGAAAAGTGTTGGTGATCCTGGTAGACCACATGGTGTTGTCATAAGTGCTGCT
ACTTCATTCTGGCTCCCTATTTCTCCGAAAACCGTGTTCGATTACCTCCGTGATGAGAAC
ACGCGTACCGAGTGGGACATTCTGTCCAATGGAGGTCTGCTGCAAGAAGTGGCTCAGATT
ACTAATGGCACTGAGACAGGCAATTGTGTCTCTTTACTGAGGGTTAATAGTGACAATGTT
AACCATAGCAACATGATAATCCTCCAAGAGAGCAGCACAGATCCAACAGGATCCTATGTG
ATCTATGCACCAGTTGATATCAGTGCAATGAATGGTGTGTTGAATGGTGGAGATCCAGAT
TATGTTGCTCTGCTGCCTTCTGGATTCGCCATTCTCCCCGATGGTCCATCAGGAGGCAGG
GGAGCTTATAATCATGGCTCTGGTGGATCTCTGCTGACCGTCGCGTTTCAGATTTTGGTT
GATTTAGTTCCTGTTGCTAAGCTTTCATTGGGTTCAGTTGCTACTGTCAACAATTTGATT
GTTTGCACAGTTGATAGGATCAAGGCTGCTCTCTTAGCACAGCCAACCTGA