Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400094028
CDS Infomation

pacid=37470672 polypeptide=PGSC0003DMP400065703 locus=PGSC0003DMG400043599 ID=PGSC0003DMT400094028.v4.03 annot-version=v4.03
Sequence

ATGCCGGACAACAAGAAGATGCTAAGTTCACAATTTGATGATAACAATTTGGAATTCAGT
TATTTACAAGGCCTTTCTATATTGCTGCCAACTATTGTTCTAGTTTATTGTCTGCTCAAA
TTTATTCTTCAATTGCTAATTCATCATCCTCAACATATGTCTCAGCCCAAAAAAAGAGAG
ATAGAAATCGTTACGAACGAAAAATCAGATGCTTCAGATCAAGCAGAAGATCAGTTGGAT
GAAGCAAAAGGCCAACAAGCTGTTCTGTACAGATTTAGGCAGAGGCACAAAAATATACAA
ACACAAATAACAAGCTGTGCTAAATTGATTGCTAAGGAAGAGGAAAGTTGTGTGTCAAAA
GCGCCTCCTCGTCTTCGTGATGGTGATCTAGTGCATTTCAGCCACAGACATCCTTTGCTA
AGATTTCATCTTAAAGGAACAGAAGTTATAAGATGCAACATGTGTACTATTATAATTTCC
AGGGTAGCTTATGGTTGCGATTGTTGTCGTTACTTTCTCCATGAGGTATGTTCTAACATT
CCTAAGAGAATTCGACATGATTTTCATCCTATGCACTCACTCACCCTTCTTCCCATTCCT
TCAATCGCTCTTTGGCATTCGAAAGTGGAAAGCGAGTTCTGTTGTGTGGCATGTGGTTAT
GACAACTCATTGTTTTCATTTTACTATCATTGTGATTTGTGTAAATTTGATCTTCATCTT
GAATGTGCTTCTGTGACGACGAAATTGATCCATAAGGTAAAATACCCTCTTGATCTCTTC
ACTTCCTTTCCACTAAAAAGTGAAGGGGCAGCCCTGTTATGTTGTATTTGTAACCAAGTT
ATGAATAGGCAATCCGGTTGGCTTTTCTATAATCGCGAGTTTGATTACATCTGTCATTTC
GAGTGTGCTGCTGAAGAAGAGCTTGCAGTTATAGGGGATCAAAGTTTCCTATCTGAAGTC
CAGAAATCCTTGCTCCTCCAAAAAAGTTGTTCTGGCCAACAACAGAAACTCGAAAAGCTA
GGAGAAGTTATACACTTCAGCCACCGCCATCCGTTGACAGCAATTAAACAAACGAATAAG
GCGTCAATCATGAATTGCTGCATATGTTCAAACCAGGCTTTATCCGGTTACATTTGCCAG
CTATGCAATTACTTCATCGACGAGACTTGTTTCCCTCTACCGCGAAGGATACAACACCAT
TTTCACCCAAATCACCCCCTTATACTCGCTAGCTATAACGATCCCCCAAAGTCCAAATGC
AGAGCTTGTGGTCATGAAGAAGGTGCAAAATACCGTTGCTCTACTTGTAAATTCAGTCTC
CATCGTTGCTGTGCTGGTGCTCCCATGACATTTACCCTTGGCACAAACAAGAAAGTTTCT
TATAAACTTCTCTATTCGTATCCATGTGATGGTGAGATGGCAGTTATCAAATGCAGTGGC
TGTTCCAGCGAGTTAAACTCAAAAGAGAGCTTCATGTACTACAATTTCGACCTCGATGAA
GTGCTTCATGTCCAATGTGCACTTAATAGAGAAACTGACTCTTATGATACTATGCTTGTT
TTAGCTTCTGAAAGACTAAAAAGTATTAAAATAGAGGAAGACCACTCCTAG

Peptide Sequence

PEP ID

PGSC0003DMP400065703
PEP Infomation

pacid=37470672 transcript=PGSC0003DMT400094028 locus=PGSC0003DMG400043599 ID=PGSC0003DMT400094028.v4.03 annot-version=v4.03
Sequence

MPDNKKMLSSQFDDNNLEFSYLQGLSILLPTIVLVYCLLKFILQLLIHHPQHMSQPKKRE
IEIVTNEKSDASDQAEDQLDEAKGQQAVLYRFRQRHKNIQTQITSCAKLIAKEEESCVSK
APPRLRDGDLVHFSHRHPLLRFHLKGTEVIRCNMCTIIISRVAYGCDCCRYFLHEVCSNI
PKRIRHDFHPMHSLTLLPIPSIALWHSKVESEFCCVACGYDNSLFSFYYHCDLCKFDLHL
ECASVTTKLIHKVKYPLDLFTSFPLKSEGAALLCCICNQVMNRQSGWLFYNREFDYICHF
ECAAEEELAVIGDQSFLSEVQKSLLLQKSCSGQQQKLEKLGEVIHFSHRHPLTAIKQTNK
ASIMNCCICSNQALSGYICQLCNYFIDETCFPLPRRIQHHFHPNHPLILASYNDPPKSKC
RACGHEEGAKYRCSTCKFSLHRCCAGAPMTFTLGTNKKVSYKLLYSYPCDGEMAVIKCSG
CSSELNSKESFMYYNFDLDEVLHVQCALNRETDSYDTMLVLASERLKSIKIEEDHS*

Transcript Sequence

Transcript ID

PGSC0003DMT400094028
Transcript Infomation

pacid=37470672 locus=PGSC0003DMG400043599 ID=PGSC0003DMT400094028.v4.03 annot-version=v4.03
Sequence

ATGCCGGACAACAAGAAGATGCTAAGTTCACAATTTGATGATAACAATTTGGAATTCAGT
TATTTACAAGGCCTTTCTATATTGCTGCCAACTATTGTTCTAGTTTATTGTCTGCTCAAA
TTTATTCTTCAATTGCTAATTCATCATCCTCAACATATGTCTCAGCCCAAAAAAAGAGAG
ATAGAAATCGTTACGAACGAAAAATCAGATGCTTCAGATCAAGCAGAAGATCAGTTGGAT
GAAGCAAAAGGCCAACAAGCTGTTCTGTACAGATTTAGGCAGAGGCACAAAAATATACAA
ACACAAATAACAAGCTGTGCTAAATTGATTGCTAAGGAAGAGGAAAGTTGTGTGTCAAAA
GCGCCTCCTCGTCTTCGTGATGGTGATCTAGTGCATTTCAGCCACAGACATCCTTTGCTA
AGATTTCATCTTAAAGGAACAGAAGTTATAAGATGCAACATGTGTACTATTATAATTTCC
AGGGTAGCTTATGGTTGCGATTGTTGTCGTTACTTTCTCCATGAGGTATGTTCTAACATT
CCTAAGAGAATTCGACATGATTTTCATCCTATGCACTCACTCACCCTTCTTCCCATTCCT
TCAATCGCTCTTTGGCATTCGAAAGTGGAAAGCGAGTTCTGTTGTGTGGCATGTGGTTAT
GACAACTCATTGTTTTCATTTTACTATCATTGTGATTTGTGTAAATTTGATCTTCATCTT
GAATGTGCTTCTGTGACGACGAAATTGATCCATAAGGTAAAATACCCTCTTGATCTCTTC
ACTTCCTTTCCACTAAAAAGTGAAGGGGCAGCCCTGTTATGTTGTATTTGTAACCAAGTT
ATGAATAGGCAATCCGGTTGGCTTTTCTATAATCGCGAGTTTGATTACATCTGTCATTTC
GAGTGTGCTGCTGAAGAAGAGCTTGCAGTTATAGGGGATCAAAGTTTCCTATCTGAAGTC
CAGAAATCCTTGCTCCTCCAAAAAAGTTGTTCTGGCCAACAACAGAAACTCGAAAAGCTA
GGAGAAGTTATACACTTCAGCCACCGCCATCCGTTGACAGCAATTAAACAAACGAATAAG
GCGTCAATCATGAATTGCTGCATATGTTCAAACCAGGCTTTATCCGGTTACATTTGCCAG
CTATGCAATTACTTCATCGACGAGACTTGTTTCCCTCTACCGCGAAGGATACAACACCAT
TTTCACCCAAATCACCCCCTTATACTCGCTAGCTATAACGATCCCCCAAAGTCCAAATGC
AGAGCTTGTGGTCATGAAGAAGGTGCAAAATACCGTTGCTCTACTTGTAAATTCAGTCTC
CATCGTTGCTGTGCTGGTGCTCCCATGACATTTACCCTTGGCACAAACAAGAAAGTTTCT
TATAAACTTCTCTATTCGTATCCATGTGATGGTGAGATGGCAGTTATCAAATGCAGTGGC
TGTTCCAGCGAGTTAAACTCAAAAGAGAGCTTCATGTACTACAATTTCGACCTCGATGAA
GTGCTTCATGTCCAATGTGCACTTAATAGAGAAACTGACTCTTATGATACTATGCTTGTT
TTAGCTTCTGAAAGACTAAAAAGTATTAAAATAGAGGAAGACCACTCCTAG