Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400093989
CDS Infomation

pacid=37445273 polypeptide=PGSC0003DMP400065664 locus=PGSC0003DMG400043560 ID=PGSC0003DMT400093989.v4.03 annot-version=v4.03
Sequence

ATGGCTGAAACTCAATCGATAGCAAGAACTTTCCCAGTGAAGCCAAAATTGAAACCCACT
TCAGCAAATTCATCTACACCAACCCCTGAATCCAAGTATTGGAAATCCTTCAAAACCCCT
AAAGAAATTCAAACCCCACAAACACTTGTTTCTTCAATCAACTCCATAGTCTTCTCTCCA
ACATCTCCTCACGATTTCGCCGCCGCCCATTCCGCCACCGTTTCCATTTACTCCGGCAAA
ACTCTTGAACCCAAAACAACCATCTCCTCTGCTTTCCGTGATACTGTCACTTCCGCTTCA
TTCCGATCCGATGGTCGTCTTATCGCTGCTGGTGACCTTTCCGGCGCCGTTCAAGTTCTC
GACCTCAAGACCCGTGTCCCACTTCGTCGGCTTCGTGGCCATACCCGACCTGTTCGTGTT
GTTCGTTACCCGCGGGTTGATAAGCTTCACCTTTTCTCCGGTGGGGATGATGCTATTGTT
AAGTATTGGGATATTACTACTGAGTCAAAAATTTACGATCTTTTGGGGCATAAGGATTAT
GTGAGGTGTGGGGATGCTTCTCCTGTAAGTGATGATATGTTTGTTTCTGGGTCTTATGAT
CATACGGTGAAAGTTTGGGATGTTAGGGTGATGAATTCGGGTTCAGTGATGGAGTTTGAC
CATGGAAAGCCTGTTGAGGATGTGATTTACTTGCCATCTGGTGGGTTAGTTGCTACTGCT
GGTGGAAATTCTGTGAAGATTTGGGATATACTCGGAGGTGGAAAATTGCTATGTACAATG
GAGAGTCACAACAAGACTGTTACTTCGATTTGTGTTGGTAAAATTGGGAAGGAGAGTGGT
GAGGAGGCGCAGCAATATCGGATTTTGAGTGTGGCTTTGGATGGATATATGAAGGTGTTT
GATTATGCCAAGTTCAAAATTACTCATTCGATGAGGTTTCCGAATCCTCTAATGTCTGTT
GGGTTCTCGCCTGATTGTTCTACAAGGGTGATTGGGGCATCAAATGGGACATTGTATATA
GGCAGGAGAAAGGTGAAGGAAAGTGAAAGCATGGAACTTGTTGATGTTGGTGGCTTTGGT
CAGGTAGAAGAGCCTCGGAGGCGGGTGTTGAGGCCATCTTATTACAGATATTTTCTGCGG
GGGCAAAGTGAGAAGCCCTCTGAATGGGATTACTTGATTAAGAAGCCGAAGAAGATAAAG
GTGACGGAGCATGATAAGTTGTTGAAGAAGTTTATGCACAAGGAGGCTTTGTTAGCTGCT
TTGAATGGGAAGAACCCGGCAAATGTGGTAGCTGTTATGGAGGAATTGGTTGCTCGGAAG
AAGTTGATGAGATGTGTATCAAACTTGGAAACGGAAGAACTTGGTTTGCTTTTGAAGTTT
CTGCAGAGATATTCAACTATGCCTAGATTTTCAAGGTTTTTGATGGGCTTGACAAAGAAA
GTAGTTGAGATGCGAGCTGAAGATATCAAATCATCGGATGAACTGCGAGGTGACATTAGA
AATCTTAAACGAGATGTGGAGGAGGAAATACGATTACAGCAGACATTGCTACAGATACAG
GGCATTGTGACTCCTCTGCTCAAGATTGCTGGAAGGAGATGA

Peptide Sequence

PEP ID

PGSC0003DMP400065664
PEP Infomation

pacid=37445273 transcript=PGSC0003DMT400093989 locus=PGSC0003DMG400043560 ID=PGSC0003DMT400093989.v4.03 annot-version=v4.03
Sequence

MAETQSIARTFPVKPKLKPTSANSSTPTPESKYWKSFKTPKEIQTPQTLVSSINSIVFSP
TSPHDFAAAHSATVSIYSGKTLEPKTTISSAFRDTVTSASFRSDGRLIAAGDLSGAVQVL
DLKTRVPLRRLRGHTRPVRVVRYPRVDKLHLFSGGDDAIVKYWDITTESKIYDLLGHKDY
VRCGDASPVSDDMFVSGSYDHTVKVWDVRVMNSGSVMEFDHGKPVEDVIYLPSGGLVATA
GGNSVKIWDILGGGKLLCTMESHNKTVTSICVGKIGKESGEEAQQYRILSVALDGYMKVF
DYAKFKITHSMRFPNPLMSVGFSPDCSTRVIGASNGTLYIGRRKVKESESMELVDVGGFG
QVEEPRRRVLRPSYYRYFLRGQSEKPSEWDYLIKKPKKIKVTEHDKLLKKFMHKEALLAA
LNGKNPANVVAVMEELVARKKLMRCVSNLETEELGLLLKFLQRYSTMPRFSRFLMGLTKK
VVEMRAEDIKSSDELRGDIRNLKRDVEEEIRLQQTLLQIQGIVTPLLKIAGRR*

Transcript Sequence

Transcript ID

PGSC0003DMT400093989
Transcript Infomation

pacid=37445273 locus=PGSC0003DMG400043560 ID=PGSC0003DMT400093989.v4.03 annot-version=v4.03
Sequence

ATGGCTGAAACTCAATCGATAGCAAGAACTTTCCCAGTGAAGCCAAAATTGAAACCCACT
TCAGCAAATTCATCTACACCAACCCCTGAATCCAAGTATTGGAAATCCTTCAAAACCCCT
AAAGAAATTCAAACCCCACAAACACTTGTTTCTTCAATCAACTCCATAGTCTTCTCTCCA
ACATCTCCTCACGATTTCGCCGCCGCCCATTCCGCCACCGTTTCCATTTACTCCGGCAAA
ACTCTTGAACCCAAAACAACCATCTCCTCTGCTTTCCGTGATACTGTCACTTCCGCTTCA
TTCCGATCCGATGGTCGTCTTATCGCTGCTGGTGACCTTTCCGGCGCCGTTCAAGTTCTC
GACCTCAAGACCCGTGTCCCACTTCGTCGGCTTCGTGGCCATACCCGACCTGTTCGTGTT
GTTCGTTACCCGCGGGTTGATAAGCTTCACCTTTTCTCCGGTGGGGATGATGCTATTGTT
AAGTATTGGGATATTACTACTGAGTCAAAAATTTACGATCTTTTGGGGCATAAGGATTAT
GTGAGGTGTGGGGATGCTTCTCCTGTAAGTGATGATATGTTTGTTTCTGGGTCTTATGAT
CATACGGTGAAAGTTTGGGATGTTAGGGTGATGAATTCGGGTTCAGTGATGGAGTTTGAC
CATGGAAAGCCTGTTGAGGATGTGATTTACTTGCCATCTGGTGGGTTAGTTGCTACTGCT
GGTGGAAATTCTGTGAAGATTTGGGATATACTCGGAGGTGGAAAATTGCTATGTACAATG
GAGAGTCACAACAAGACTGTTACTTCGATTTGTGTTGGTAAAATTGGGAAGGAGAGTGGT
GAGGAGGCGCAGCAATATCGGATTTTGAGTGTGGCTTTGGATGGATATATGAAGGTGTTT
GATTATGCCAAGTTCAAAATTACTCATTCGATGAGGTTTCCGAATCCTCTAATGTCTGTT
GGGTTCTCGCCTGATTGTTCTACAAGGGTGATTGGGGCATCAAATGGGACATTGTATATA
GGCAGGAGAAAGGTGAAGGAAAGTGAAAGCATGGAACTTGTTGATGTTGGTGGCTTTGGT
CAGGTAGAAGAGCCTCGGAGGCGGGTGTTGAGGCCATCTTATTACAGATATTTTCTGCGG
GGGCAAAGTGAGAAGCCCTCTGAATGGGATTACTTGATTAAGAAGCCGAAGAAGATAAAG
GTGACGGAGCATGATAAGTTGTTGAAGAAGTTTATGCACAAGGAGGCTTTGTTAGCTGCT
TTGAATGGGAAGAACCCGGCAAATGTGGTAGCTGTTATGGAGGAATTGGTTGCTCGGAAG
AAGTTGATGAGATGTGTATCAAACTTGGAAACGGAAGAACTTGGTTTGCTTTTGAAGTTT
CTGCAGAGATATTCAACTATGCCTAGATTTTCAAGGTTTTTGATGGGCTTGACAAAGAAA
GTAGTTGAGATGCGAGCTGAAGATATCAAATCATCGGATGAACTGCGAGGTGACATTAGA
AATCTTAAACGAGATGTGGAGGAGGAAATACGATTACAGCAGACATTGCTACAGATACAG
GGCATTGTGACTCCTCTGCTCAAGATTGCTGGAAGGAGATGA