Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400093835
CDS Infomation

pacid=37459551 polypeptide=PGSC0003DMP400065510 locus=PGSC0003DMG400043406 ID=PGSC0003DMT400093835.v4.03 annot-version=v4.03
Sequence

ATGGATGATTGGTCAGATTTTAATTATGATATGTTGGTTCTCATAGCTAAGCGTTTCAAT
TTAATTGAAGATTACTTAAATTTCGCCTCTGTCTGCAAATCGTGGCGATGTGCGGCTACC
AAGGAGAATTTTAACACTAATCTGGCTAGAGTTCCGTGGCTGATGTTAGCTGAGGAAGAA
GGCAATTCAAGTCGACAGTTGGTCAGCCCTTATAATGGCATGATTATGAAGAAGAAGATT
CCAAAAGCCAGCGGAAAAAGATGTATGGAGACTATGGGATGGCTTGTTACGGTAGGAAAA
GATGAAGTTGATGGGAGTGGTCGCGTTCTAGTTTGTGATATTGAATCCAATCAGACACAA
GTAGTTGCACAACTAGCAAGGGGATATAATTATGGGAACGAGTCGTACATAGTAGAATCA
CTAGGAACATTATTTATAGTTGTGCGTGAAGGTCTTATGTTAAGATACATTACAGATGAT
ATCGAGAGGATTCCATTGACACTTACCCAAGATGATATTTTTGATGATCTTGATGGGGAG
TTAACTTATGGGACAACAAATATTGATGTTTTTGAGGTGGATTTAGTTAGTGGCAAATTG
ACGCAAACTAAAGAATTAGGGGACACAGCTTTTTTTATTGGTCATAATGCTTCTCGCTCT
GTTCAACCTTGTCAATTTCCTGGAATCAAGCCAAATCATATTTATTTTACCGATGATTAT
TGGGAATCATACCTTGTATTTGAAGAAGGCGGAGGCTTGGACATGGGTGTTTTCAACTTA
GCTGATGGCACCATCCTCCCCTTCCCACACTACAAGGGTGTCTCTTTAAGTCTTGTTTGT
CCTCCAACTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400065510
PEP Infomation

pacid=37459551 transcript=PGSC0003DMT400093835 locus=PGSC0003DMG400043406 ID=PGSC0003DMT400093835.v4.03 annot-version=v4.03
Sequence

MDDWSDFNYDMLVLIAKRFNLIEDYLNFASVCKSWRCAATKENFNTNLARVPWLMLAEEE
GNSSRQLVSPYNGMIMKKKIPKASGKRCMETMGWLVTVGKDEVDGSGRVLVCDIESNQTQ
VVAQLARGYNYGNESYIVESLGTLFIVVREGLMLRYITDDIERIPLTLTQDDIFDDLDGE
LTYGTTNIDVFEVDLVSGKLTQTKELGDTAFFIGHNASRSVQPCQFPGIKPNHIYFTDDY
WESYLVFEEGGGLDMGVFNLADGTILPFPHYKGVSLSLVCPPT*

Transcript Sequence

Transcript ID

PGSC0003DMT400093835
Transcript Infomation

pacid=37459551 locus=PGSC0003DMG400043406 ID=PGSC0003DMT400093835.v4.03 annot-version=v4.03
Sequence

ATGGATGATTGGTCAGATTTTAATTATGATATGTTGGTTCTCATAGCTAAGCGTTTCAAT
TTAATTGAAGATTACTTAAATTTCGCCTCTGTCTGCAAATCGTGGCGATGTGCGGCTACC
AAGGAGAATTTTAACACTAATCTGGCTAGAGTTCCGTGGCTGATGTTAGCTGAGGAAGAA
GGCAATTCAAGTCGACAGTTGGTCAGCCCTTATAATGGCATGATTATGAAGAAGAAGATT
CCAAAAGCCAGCGGAAAAAGATGTATGGAGACTATGGGATGGCTTGTTACGGTAGGAAAA
GATGAAGTTGATGGGAGTGGTCGCGTTCTAGTTTGTGATATTGAATCCAATCAGACACAA
GTAGTTGCACAACTAGCAAGGGGATATAATTATGGGAACGAGTCGTACATAGTAGAATCA
CTAGGAACATTATTTATAGTTGTGCGTGAAGGTCTTATGTTAAGATACATTACAGATGAT
ATCGAGAGGATTCCATTGACACTTACCCAAGATGATATTTTTGATGATCTTGATGGGGAG
TTAACTTATGGGACAACAAATATTGATGTTTTTGAGGTGGATTTAGTTAGTGGCAAATTG
ACGCAAACTAAAGAATTAGGGGACACAGCTTTTTTTATTGGTCATAATGCTTCTCGCTCT
GTTCAACCTTGTCAATTTCCTGGAATCAAGCCAAATCATATTTATTTTACCGATGATTAT
TGGGAATCATACCTTGTATTTGAAGAAGGCGGAGGCTTGGACATGGGTGTTTTCAACTTA
GCTGATGGCACCATCCTCCCCTTCCCACACTACAAGGGTGTCTCTTTAAGTCTTGTTTGT
CCTCCAACTTGA