Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400093829
CDS Infomation

pacid=37460836 polypeptide=PGSC0003DMP400065504 locus=PGSC0003DMG400043400 ID=PGSC0003DMT400093829.v4.03 annot-version=v4.03
Sequence

ATGCAGCCATGGATGACATTAGGTGCTTCATTGGTGGCAAAAGCTGTTGACTATACGGTG
GCCCCTCTCGGCAATCAACTAAGATATCTTTATCAGTATAACAAAAATACCGACAATCTG
AGAAAGCAAGCTGAAAGGTTGCAAGAGAAGACACAAGATATCCAAGCATTGGTGAACTAT
GCCAAAAGAAATGACAGAGAAATCAAAAGCACAGTTAAAAATTGGTTACAAGAGGTAGAT
GCAATCACTGCTGAGATCAAATCATGGGATGATAAAACTCAAAACTTGAGCAAAATGTGC
CTCCCTCATCTGGTCTCACGGTATAAGCAGAGCAAGATGGCAACTAAAAAAATCATGACC
ATCCAAGAACTTCTTGGTAGAACTCTCACGGAAGATGTATCCATACCGCAGGCCCCTCCT
TTGAATATACCATTCATTTCTGACCAAGAAAAACCCGAAAAGGACCAGGTTATTGAGATG
GTAGCAAGTAGTTCATCTGATGTATCCATACCGCAGGCCCTTCCTTTGAATATACCATTC
ATTTCTGACCAAGAAAAACCCGAAAAGGACCAGGTTATTGAGATGGTAGCAAGTAGTTCA
TCTGATGTATCCATACCGCAGGCCCTTCCTTTGAATATACCATTCATTTCTGACCAAGAA
AAACCCGAAGAGGACCAAGTTATTGAGATGGTGGCAAGTAGTTCATCCGTTGTTGGTCAA
AACGTCAGTAGAGCAAATGGTGCTCTGCTAAGTGCGGATGATGTTTCTATCAAGCGAAGA
CTAACCATGGATCCAATTATTGCTTATCAGCTAAGAAAAAATGTGGCAAACATTATTCAC
CTGCAAAGAGAAGCAGTGAATCAGATCATTGAGGAACTAAAGGATGACCACTATAAGGGG
ATAGGGATTTATGGCATGGGGGGCATCGGTAAGACCACTCTTGCCGTAGAAGTAGGGAAA
TTGGCTAGAGACTGTGGAATTGTTAAGGAAGTTATAATGGTGGTTGTTTCCCAAACGCCA
AACATAAGAAAGATCCAGGGTCAAATTGCGGATATGTTAAATCACAGACTTGAGGAGGAA
AGCACATTAGGAAGAGCAGGTAGACTTTATACGCGACTGTCCAATGAGAGCGTACTTCTC
ATACTGGACGATGTTTGGTCATACATTGACTTAGCAGAGATAGGGATCCCTCATGGTGAT
GAGCACAAGGCCTGTAGGATTATGCTTACCACGCGACAAAAAGATCTATGTACAGCTATA
GGGACCAAAGGAATACCATTGAAACTTTTATCAGAAGAAGAATCGTCGCATTTATTGAGG
AAATATGCTTGCACGAGCACTTCTGACCTTTGTCCGGAGTTGGATAGCATGGTCATGAAT
TTTGTCAAAGAATGTCAAGGCCTGCCATTGGCACTTGTGACTGTTGGAAGTGCATTACGA
GGAAAAGAACAAGTGGAGTGGGAAGCAGCACTACAGCTCCTTAAGAAGTCCCAACCCTTT
AGCCCCACTTATGCAAGCAAGACCATTTTCTCCTGCCTGGATTTGAGCTACAATTTTTTG
GAAAATGAGGAAATCAGGTTGTGCTTTCTGATGTGTTGTTTGTACCCAGAAGATCGTGAA
ATAAGTATTGAAGACTTGACTAGAGACTGGACAGGAAAAGGGCTGTTCTCAGATGTGGAC
ACTATTGAAGAAGCTAGAGCCAGAGTGTGCTTAAGAGTTGGCCAACTTAAATCATCTTGC
CTGTTGCTTGATGTTGGGAAGGAGGGTTTCGTTAAAATGCATGATGTTGTTCGTGACTTT
GCTATATATATAGCATCTGAAGAGAAGCATGGATTCATGGTAAGAGCTGGTCACAATCTG
AACAAGTGGCCACCAAGGGAGTCATTCAGCCAAAAAACAGCTATTTCCTTCATGAACAAT
AATATCCATGTGCTTCCAAGTGATGTACATTGCCCCAATCTTCAAATTTTACATCTTGGA
GAAAATGAAGGTCTTGAACAGATACCAGTGGACTTTTTTATACAGATGAAAATGCTCCAG
GTTTTGGATTTAAGTGAAAGGGTTGGTATCCATTCACTAAATCCTCTCTATCAGTTAGTC
CCGAATGCCACAAGAAAAAATACATTTCCCCTCAGTTTTCCATCATCCGTTGAAGTTCTC
ACAAACCTGCGAACTTTACGTTTAGACCACTGCAAGTTAGCTGATGTATCTATTCTTGGA
AAATTAAAGGGCCTGGAAATTTTAAGTTTATACGGGTCCTCTATCACACAACTTCCAAAT
GAATTTGGGGACTTGGTTAATTTGAGACTATTGGATTTGTCATTCTGTGTGTACCTTCAG
AAAATCCCGGAGAACTTGATATCGCGCCTTGTTCAATTAGAAGAACTTTATATGGGTTGG
AGTTTTCGATTGTGGCAGCTAGCTGATGGATCTGCTGAAGGGAGTGGCCAAGCAAGCTTG
TCTGAGCTAATGTCGCTGCCCCAATTAAATATTTTGTGTGTGGAAGTCTCCACCCTTCTA
GCTTTCCCTGAGAACTTTGATCTTCCTAGCATACACAAGTTTGAGATAACAGTAGGTTAC
CACTCAGCTATATGTTATCCAAACTCTAGGAGGTTCTATCTTAGAGAAATAAAGACTGGT
ATACCAAATGGGATGAAGCATATGCTTCAATTCTCAAAGGAATTGACAATGTTCTGTGCA
TCCAAGGTAATACTGAAAAGTATCTTTGATGTCGAAGGGGGCTTAAATCACTTGAAAACT
CTTGAAATAACTGCCAATGATGAAATTACCTATTTCATTGATGAGGTTCTTCATAGCGAT
GCACCTTTAGTTTTAGGATCTTTGGAGAAATTACATCTTCGGACGTTCAAGAAGCTATTT
TCACTTTCTGTCCGCCCAATCAAACCAGGTTCCTTCCAGAATTTGCGGATTCTAAGGGTT
GAAAATTGTCATAATTTATTTTTTCTAATTCAAACTTCCTTGCTCCAGAGGCTATCAAGT
ATTGAAGAAGTTCATGTGTATTCATGTAACAAGTTACTCGATATATTTCAACTTAACGAG
GCAGCTTTTGATGAAGAACAGAAGCTCCTCTCAACGCTCAAAAAGATCTGGTTAGCTAGA
TTGCCTACGCTGTTCGAAATCTGGAGAGTACCTAAGCAGTTACTCCTGAATGCAACCCTT
CAAAATAAACAATGCTTCAGTAACATAACTGATGTGTTGATTAGGTATTGTGATAACTTG
GAATATGTATTCCCATCTGTAGCTGCTCAAAATCTATGTCAACTGGATAATCTCCAAATT
GTGGAGTGCCACAGATTGACAAGAATCATAGGAGAAGAACCAGAAGGTGTCTCAGCAAAT
GTTCAAAATGGACATGTTTTATTTCCCAACCTCAGAGCTGTTCATATAGGAAGCTGCAGA
AACCTGAGAAATCTATTTTCGATTATGACAGCTCGAAGTCTTGGCAAACTAGAAGAGTTA
AAGGTAAATGACATGCCAAATCTGGTAGAACTCATAAGCAATGAAGAAAGTGAAAGGGAA
AGGGAAGAGGAAAACGATAAAATAATCGTGCTGCCAGAGTTGAAAGTCCTGAGAATTACA
AAATCTGGAAACGTGGAACGGCTTTGTACAGAGGCTTTCTTTATGGATCTACCATCGTTA
GAAGAATTTGTTCTTCTGGAGTGTCCTAAAATGGCTGACACTGTTAAACGTGGACTGGGT
AGCGCATCAAATCTTCTTAAAGCACAGATTGAGGAACAATCATTCTTTGGCACAATGGCA
CGAGAGGTTTTCAGTAGAAAGGTGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400065504
PEP Infomation

pacid=37460836 transcript=PGSC0003DMT400093829 locus=PGSC0003DMG400043400 ID=PGSC0003DMT400093829.v4.03 annot-version=v4.03
Sequence

MQPWMTLGASLVAKAVDYTVAPLGNQLRYLYQYNKNTDNLRKQAERLQEKTQDIQALVNY
AKRNDREIKSTVKNWLQEVDAITAEIKSWDDKTQNLSKMCLPHLVSRYKQSKMATKKIMT
IQELLGRTLTEDVSIPQAPPLNIPFISDQEKPEKDQVIEMVASSSSDVSIPQALPLNIPF
ISDQEKPEKDQVIEMVASSSSDVSIPQALPLNIPFISDQEKPEEDQVIEMVASSSSVVGQ
NVSRANGALLSADDVSIKRRLTMDPIIAYQLRKNVANIIHLQREAVNQIIEELKDDHYKG
IGIYGMGGIGKTTLAVEVGKLARDCGIVKEVIMVVVSQTPNIRKIQGQIADMLNHRLEEE
STLGRAGRLYTRLSNESVLLILDDVWSYIDLAEIGIPHGDEHKACRIMLTTRQKDLCTAI
GTKGIPLKLLSEEESSHLLRKYACTSTSDLCPELDSMVMNFVKECQGLPLALVTVGSALR
GKEQVEWEAALQLLKKSQPFSPTYASKTIFSCLDLSYNFLENEEIRLCFLMCCLYPEDRE
ISIEDLTRDWTGKGLFSDVDTIEEARARVCLRVGQLKSSCLLLDVGKEGFVKMHDVVRDF
AIYIASEEKHGFMVRAGHNLNKWPPRESFSQKTAISFMNNNIHVLPSDVHCPNLQILHLG
ENEGLEQIPVDFFIQMKMLQVLDLSERVGIHSLNPLYQLVPNATRKNTFPLSFPSSVEVL
TNLRTLRLDHCKLADVSILGKLKGLEILSLYGSSITQLPNEFGDLVNLRLLDLSFCVYLQ
KIPENLISRLVQLEELYMGWSFRLWQLADGSAEGSGQASLSELMSLPQLNILCVEVSTLL
AFPENFDLPSIHKFEITVGYHSAICYPNSRRFYLREIKTGIPNGMKHMLQFSKELTMFCA
SKVILKSIFDVEGGLNHLKTLEITANDEITYFIDEVLHSDAPLVLGSLEKLHLRTFKKLF
SLSVRPIKPGSFQNLRILRVENCHNLFFLIQTSLLQRLSSIEEVHVYSCNKLLDIFQLNE
AAFDEEQKLLSTLKKIWLARLPTLFEIWRVPKQLLLNATLQNKQCFSNITDVLIRYCDNL
EYVFPSVAAQNLCQLDNLQIVECHRLTRIIGEEPEGVSANVQNGHVLFPNLRAVHIGSCR
NLRNLFSIMTARSLGKLEELKVNDMPNLVELISNEESEREREEENDKIIVLPELKVLRIT
KSGNVERLCTEAFFMDLPSLEEFVLLECPKMADTVKRGLGSASNLLKAQIEEQSFFGTMA
REVFSRKV*

Transcript Sequence

Transcript ID

PGSC0003DMT400093829
Transcript Infomation

pacid=37460836 locus=PGSC0003DMG400043400 ID=PGSC0003DMT400093829.v4.03 annot-version=v4.03
Sequence

ATGCAGCCATGGATGACATTAGGTGCTTCATTGGTGGCAAAAGCTGTTGACTATACGGTG
GCCCCTCTCGGCAATCAACTAAGATATCTTTATCAGTATAACAAAAATACCGACAATCTG
AGAAAGCAAGCTGAAAGGTTGCAAGAGAAGACACAAGATATCCAAGCATTGGTGAACTAT
GCCAAAAGAAATGACAGAGAAATCAAAAGCACAGTTAAAAATTGGTTACAAGAGGTAGAT
GCAATCACTGCTGAGATCAAATCATGGGATGATAAAACTCAAAACTTGAGCAAAATGTGC
CTCCCTCATCTGGTCTCACGGTATAAGCAGAGCAAGATGGCAACTAAAAAAATCATGACC
ATCCAAGAACTTCTTGGTAGAACTCTCACGGAAGATGTATCCATACCGCAGGCCCCTCCT
TTGAATATACCATTCATTTCTGACCAAGAAAAACCCGAAAAGGACCAGGTTATTGAGATG
GTAGCAAGTAGTTCATCTGATGTATCCATACCGCAGGCCCTTCCTTTGAATATACCATTC
ATTTCTGACCAAGAAAAACCCGAAAAGGACCAGGTTATTGAGATGGTAGCAAGTAGTTCA
TCTGATGTATCCATACCGCAGGCCCTTCCTTTGAATATACCATTCATTTCTGACCAAGAA
AAACCCGAAGAGGACCAAGTTATTGAGATGGTGGCAAGTAGTTCATCCGTTGTTGGTCAA
AACGTCAGTAGAGCAAATGGTGCTCTGCTAAGTGCGGATGATGTTTCTATCAAGCGAAGA
CTAACCATGGATCCAATTATTGCTTATCAGCTAAGAAAAAATGTGGCAAACATTATTCAC
CTGCAAAGAGAAGCAGTGAATCAGATCATTGAGGAACTAAAGGATGACCACTATAAGGGG
ATAGGGATTTATGGCATGGGGGGCATCGGTAAGACCACTCTTGCCGTAGAAGTAGGGAAA
TTGGCTAGAGACTGTGGAATTGTTAAGGAAGTTATAATGGTGGTTGTTTCCCAAACGCCA
AACATAAGAAAGATCCAGGGTCAAATTGCGGATATGTTAAATCACAGACTTGAGGAGGAA
AGCACATTAGGAAGAGCAGGTAGACTTTATACGCGACTGTCCAATGAGAGCGTACTTCTC
ATACTGGACGATGTTTGGTCATACATTGACTTAGCAGAGATAGGGATCCCTCATGGTGAT
GAGCACAAGGCCTGTAGGATTATGCTTACCACGCGACAAAAAGATCTATGTACAGCTATA
GGGACCAAAGGAATACCATTGAAACTTTTATCAGAAGAAGAATCGTCGCATTTATTGAGG
AAATATGCTTGCACGAGCACTTCTGACCTTTGTCCGGAGTTGGATAGCATGGTCATGAAT
TTTGTCAAAGAATGTCAAGGCCTGCCATTGGCACTTGTGACTGTTGGAAGTGCATTACGA
GGAAAAGAACAAGTGGAGTGGGAAGCAGCACTACAGCTCCTTAAGAAGTCCCAACCCTTT
AGCCCCACTTATGCAAGCAAGACCATTTTCTCCTGCCTGGATTTGAGCTACAATTTTTTG
GAAAATGAGGAAATCAGGTTGTGCTTTCTGATGTGTTGTTTGTACCCAGAAGATCGTGAA
ATAAGTATTGAAGACTTGACTAGAGACTGGACAGGAAAAGGGCTGTTCTCAGATGTGGAC
ACTATTGAAGAAGCTAGAGCCAGAGTGTGCTTAAGAGTTGGCCAACTTAAATCATCTTGC
CTGTTGCTTGATGTTGGGAAGGAGGGTTTCGTTAAAATGCATGATGTTGTTCGTGACTTT
GCTATATATATAGCATCTGAAGAGAAGCATGGATTCATGGTAAGAGCTGGTCACAATCTG
AACAAGTGGCCACCAAGGGAGTCATTCAGCCAAAAAACAGCTATTTCCTTCATGAACAAT
AATATCCATGTGCTTCCAAGTGATGTACATTGCCCCAATCTTCAAATTTTACATCTTGGA
GAAAATGAAGGTCTTGAACAGATACCAGTGGACTTTTTTATACAGATGAAAATGCTCCAG
GTTTTGGATTTAAGTGAAAGGGTTGGTATCCATTCACTAAATCCTCTCTATCAGTTAGTC
CCGAATGCCACAAGAAAAAATACATTTCCCCTCAGTTTTCCATCATCCGTTGAAGTTCTC
ACAAACCTGCGAACTTTACGTTTAGACCACTGCAAGTTAGCTGATGTATCTATTCTTGGA
AAATTAAAGGGCCTGGAAATTTTAAGTTTATACGGGTCCTCTATCACACAACTTCCAAAT
GAATTTGGGGACTTGGTTAATTTGAGACTATTGGATTTGTCATTCTGTGTGTACCTTCAG
AAAATCCCGGAGAACTTGATATCGCGCCTTGTTCAATTAGAAGAACTTTATATGGGTTGG
AGTTTTCGATTGTGGCAGCTAGCTGATGGATCTGCTGAAGGGAGTGGCCAAGCAAGCTTG
TCTGAGCTAATGTCGCTGCCCCAATTAAATATTTTGTGTGTGGAAGTCTCCACCCTTCTA
GCTTTCCCTGAGAACTTTGATCTTCCTAGCATACACAAGTTTGAGATAACAGTAGGTTAC
CACTCAGCTATATGTTATCCAAACTCTAGGAGGTTCTATCTTAGAGAAATAAAGACTGGT
ATACCAAATGGGATGAAGCATATGCTTCAATTCTCAAAGGAATTGACAATGTTCTGTGCA
TCCAAGGTAATACTGAAAAGTATCTTTGATGTCGAAGGGGGCTTAAATCACTTGAAAACT
CTTGAAATAACTGCCAATGATGAAATTACCTATTTCATTGATGAGGTTCTTCATAGCGAT
GCACCTTTAGTTTTAGGATCTTTGGAGAAATTACATCTTCGGACGTTCAAGAAGCTATTT
TCACTTTCTGTCCGCCCAATCAAACCAGGTTCCTTCCAGAATTTGCGGATTCTAAGGGTT
GAAAATTGTCATAATTTATTTTTTCTAATTCAAACTTCCTTGCTCCAGAGGCTATCAAGT
ATTGAAGAAGTTCATGTGTATTCATGTAACAAGTTACTCGATATATTTCAACTTAACGAG
GCAGCTTTTGATGAAGAACAGAAGCTCCTCTCAACGCTCAAAAAGATCTGGTTAGCTAGA
TTGCCTACGCTGTTCGAAATCTGGAGAGTACCTAAGCAGTTACTCCTGAATGCAACCCTT
CAAAATAAACAATGCTTCAGTAACATAACTGATGTGTTGATTAGGTATTGTGATAACTTG
GAATATGTATTCCCATCTGTAGCTGCTCAAAATCTATGTCAACTGGATAATCTCCAAATT
GTGGAGTGCCACAGATTGACAAGAATCATAGGAGAAGAACCAGAAGGTGTCTCAGCAAAT
GTTCAAAATGGACATGTTTTATTTCCCAACCTCAGAGCTGTTCATATAGGAAGCTGCAGA
AACCTGAGAAATCTATTTTCGATTATGACAGCTCGAAGTCTTGGCAAACTAGAAGAGTTA
AAGGTAAATGACATGCCAAATCTGGTAGAACTCATAAGCAATGAAGAAAGTGAAAGGGAA
AGGGAAGAGGAAAACGATAAAATAATCGTGCTGCCAGAGTTGAAAGTCCTGAGAATTACA
AAATCTGGAAACGTGGAACGGCTTTGTACAGAGGCTTTCTTTATGGATCTACCATCGTTA
GAAGAATTTGTTCTTCTGGAGTGTCCTAAAATGGCTGACACTGTTAAACGTGGACTGGGT
AGCGCATCAAATCTTCTTAAAGCACAGATTGAGGAACAATCATTCTTTGGCACAATGGCA
CGAGAGGTTTTCAGTAGAAAGGTGTGA