Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400093802
CDS Infomation

pacid=37448929 polypeptide=PGSC0003DMP400065477 locus=PGSC0003DMG400043373 ID=PGSC0003DMT400093802.v4.03 annot-version=v4.03
Sequence

ATGGAAGGCGCAGCAACAGCTCAAGCTTTATCTCGTATTGGGTTAGCTGGTCTTGCTGTT
ATGGGTCAGAATTTAGCCTTAAACATAGCTGAAAAAGGATTTCCTATATCTGTTTACAAT
AGAACCACTTCGAAAGTAGATGAAACCCTAGATCGTGCTCAGAATGAAGGACAACTTCCG
TTGATTGGACAGTACAATCCTCGTGATTTTGTGCTGTCAATTCAACGACCCAGATCTGTT
ATCATTCTTGTTAAAGCTGGGTCACCTGTTGATCAAACGATTGCTGCGCTTTCTGAGTAT
ATGGAGCCTGGGGATACGATTATTGATGGAGGGAACGAGTGGTATGAGAATACTGAAAGG
AGGATTGATGAGGCGTCGTCGAAGGGGCTTTTGTATTTGGGTATGGGTGTTTCTGGTGGA
GAAGAAGGGGCGAGGAATGGGCCTTCGCTTATGCCTGGTGGGTCTTATGGGGCTTATACG
AATATTAGAGATATTCTTGAGAAGGTTGCAGCTCAAGTTGAGGATGGGCCTTGTGTTACT
TATATTGGTGAAGGTGGGTCGGGGAATTTTGTGAAAATGGTGCATAATGGAATTGAATAT
GGTGATATGCAGTTGATTTCAGAAGCTTATGATGTGTTGAAGAATGCAGGTGGGTTGAGT
AATTCTGAATTGGCTGATATTTTTGCTGAATGGAACCGTGGGGAATTGGAGAGTTTTTTG
GTTGAAATTACAGCGGATATATTCAATGTGAAGGATGAATTAACTGGAAATGGGGAGTTA
GTGGATAAGATTTTGGATAAAACAGGAATGAAGGGAACGGGGAAATGGACTGTGCAGCAG
GCGGCAGAGCTGTCTATTGCAGCTCCGACGATTGCTGCTTCGTTAGACAGTAGGTACATG
AGTGGATTGAAGGATGAGAGGGAAGAAGCCTCAGAGATTTTCAGGAAGGAAGGGTTAAAG
GAGGAAATAAGTTCTGATATTAATGGTAGCAGTCTTGATAAGAAGAGATTGATTGATGAT
GTGAGGCAGGCATTGTATGCGTCGAAAATCTGTAGTTATGCTCAGGGGATGAATTTGCTA
AGGGCAAAGAGCTCTGAGAAAGGGTGGAATTTGAATTTGGGAGAGATGGCAAGGATTTGG
AAAGGTGGTTGTATTATCAGGGCAGTGTTTTTGGATCGTATTAAGAAGGCGTATCAGAGG
AATCCTAATTTGGCTAACTTGATGGTTGACCCGGAGTTTGCAAGGGAGATGGTGCAGAGG
CAAGCAGCTTGGAGGAGAGTGGTGGGACTTGCTGTCCAGAAGGGAATTAGTGTTCCTGGA
ATGTCTGCTAGTCTTCAGTATTTCGACACCTACAGGCGTTCTAGGCTTCCTGCGAACCTT
GTGCAGGCTCAGAGGGACTATTTCGGGGCACATACTTATGAGAGAGTTGACAAGTCAGGA
GCATACCATACCGAGTGGGCAAAACTTGCTAGGAAAGCCCGAGTGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400065477
PEP Infomation

pacid=37448929 transcript=PGSC0003DMT400093802 locus=PGSC0003DMG400043373 ID=PGSC0003DMT400093802.v4.03 annot-version=v4.03
Sequence

MEGAATAQALSRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETLDRAQNEGQLP
LIGQYNPRDFVLSIQRPRSVIILVKAGSPVDQTIAALSEYMEPGDTIIDGGNEWYENTER
RIDEASSKGLLYLGMGVSGGEEGARNGPSLMPGGSYGAYTNIRDILEKVAAQVEDGPCVT
YIGEGGSGNFVKMVHNGIEYGDMQLISEAYDVLKNAGGLSNSELADIFAEWNRGELESFL
VEITADIFNVKDELTGNGELVDKILDKTGMKGTGKWTVQQAAELSIAAPTIAASLDSRYM
SGLKDEREEASEIFRKEGLKEEISSDINGSSLDKKRLIDDVRQALYASKICSYAQGMNLL
RAKSSEKGWNLNLGEMARIWKGGCIIRAVFLDRIKKAYQRNPNLANLMVDPEFAREMVQR
QAAWRRVVGLAVQKGISVPGMSASLQYFDTYRRSRLPANLVQAQRDYFGAHTYERVDKSG
AYHTEWAKLARKARV*

Transcript Sequence

Transcript ID

PGSC0003DMT400093802
Transcript Infomation

pacid=37448929 locus=PGSC0003DMG400043373 ID=PGSC0003DMT400093802.v4.03 annot-version=v4.03
Sequence

ATGGAAGGCGCAGCAACAGCTCAAGCTTTATCTCGTATTGGGTTAGCTGGTCTTGCTGTT
ATGGGTCAGAATTTAGCCTTAAACATAGCTGAAAAAGGATTTCCTATATCTGTTTACAAT
AGAACCACTTCGAAAGTAGATGAAACCCTAGATCGTGCTCAGAATGAAGGACAACTTCCG
TTGATTGGACAGTACAATCCTCGTGATTTTGTGCTGTCAATTCAACGACCCAGATCTGTT
ATCATTCTTGTTAAAGCTGGGTCACCTGTTGATCAAACGATTGCTGCGCTTTCTGAGTAT
ATGGAGCCTGGGGATACGATTATTGATGGAGGGAACGAGTGGTATGAGAATACTGAAAGG
AGGATTGATGAGGCGTCGTCGAAGGGGCTTTTGTATTTGGGTATGGGTGTTTCTGGTGGA
GAAGAAGGGGCGAGGAATGGGCCTTCGCTTATGCCTGGTGGGTCTTATGGGGCTTATACG
AATATTAGAGATATTCTTGAGAAGGTTGCAGCTCAAGTTGAGGATGGGCCTTGTGTTACT
TATATTGGTGAAGGTGGGTCGGGGAATTTTGTGAAAATGGTGCATAATGGAATTGAATAT
GGTGATATGCAGTTGATTTCAGAAGCTTATGATGTGTTGAAGAATGCAGGTGGGTTGAGT
AATTCTGAATTGGCTGATATTTTTGCTGAATGGAACCGTGGGGAATTGGAGAGTTTTTTG
GTTGAAATTACAGCGGATATATTCAATGTGAAGGATGAATTAACTGGAAATGGGGAGTTA
GTGGATAAGATTTTGGATAAAACAGGAATGAAGGGAACGGGGAAATGGACTGTGCAGCAG
GCGGCAGAGCTGTCTATTGCAGCTCCGACGATTGCTGCTTCGTTAGACAGTAGGTACATG
AGTGGATTGAAGGATGAGAGGGAAGAAGCCTCAGAGATTTTCAGGAAGGAAGGGTTAAAG
GAGGAAATAAGTTCTGATATTAATGGTAGCAGTCTTGATAAGAAGAGATTGATTGATGAT
GTGAGGCAGGCATTGTATGCGTCGAAAATCTGTAGTTATGCTCAGGGGATGAATTTGCTA
AGGGCAAAGAGCTCTGAGAAAGGGTGGAATTTGAATTTGGGAGAGATGGCAAGGATTTGG
AAAGGTGGTTGTATTATCAGGGCAGTGTTTTTGGATCGTATTAAGAAGGCGTATCAGAGG
AATCCTAATTTGGCTAACTTGATGGTTGACCCGGAGTTTGCAAGGGAGATGGTGCAGAGG
CAAGCAGCTTGGAGGAGAGTGGTGGGACTTGCTGTCCAGAAGGGAATTAGTGTTCCTGGA
ATGTCTGCTAGTCTTCAGTATTTCGACACCTACAGGCGTTCTAGGCTTCCTGCGAACCTT
GTGCAGGCTCAGAGGGACTATTTCGGGGCACATACTTATGAGAGAGTTGACAAGTCAGGA
GCATACCATACCGAGTGGGCAAAACTTGCTAGGAAAGCCCGAGTGTAA