Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400093776
CDS Infomation

pacid=37450696 polypeptide=PGSC0003DMP400065451 locus=PGSC0003DMG400043347 ID=PGSC0003DMT400093776.v4.03 annot-version=v4.03
Sequence

ATGGCGAACTTGTCAGAATTGCCATCCGACCTCATTAGTACAGTTGCCGAGCGTGTCAAA
GTGATTGAAGATTTTATTGCTTTTGGTGCTGTTTGTATCTCATGGCGAACTGCTGCCACA
AGAGATAATTTTGATGTATCCTCCCAACAAATTCCATTGCTTATGCTAGCAGATAAAGAT
GATGATTATCGAGAATTTTACTCTCTTTCAAAACACAAAGTTTCACGCATATTTCTCCCA
GAAATTAGAGGGCGAAGATGTTTTCCATCAGAGGGAGGTTGGATGTTCACAGACTCATGT
ACAGGAGAATTTAACTTGTTTCATCCTTTCTCCCGTACCCAAATTCAACTTCCTCCACAA
AATGCCCTAAAGGAGGCTTTACAGAAAGACGCAGAAATAACTCATTACACTATTGACAAA
GCTGTCTTATCTGCCAATCCTTCTCTTACATCAGATTATGTTTTGGTGATTTCCGATCTT
ACATATGGTAGAGGTGATCTCGCCTTTTGGCGACCGGGAGACGTCAACTGGACTAAAATT
GTCATGAGAAGAAAGGCTAGATTCAACAGTCTCTTTCACCATAAGGGGAAATTTTATGCT
TTTAATTATCATGGCGAGTTATGGGTTTTTGATGTTCCCGGCTGTAGCATTCCTGAACCA
ATTGTAGAGCCGCGCCGGCTTACTCGTCTGATAGATCCTATATTACATCAACCAGATACT
CAATACTACTTTGTTGAGATATCGGGTGCACTGTTATTTCTTATTCGATTTTTGAATAAC
ACATATACTAGTGATTATGAAACCATTAAGTTTAAGGTATTTGAAATAGATGTAATCAAA
GATCAATTGAATGAGATTAATACTTTGGGAGATTCAACAATTTTTTTGGGACGTAATGGA
GCAACTGCTATGGTTACAGGGCTGAAACCTAATCACATTTACTTTACAGATGATGTGTTT
GAGAGCTATTTCGCCTTAGAAGCAGGTGGTGGAAAAGATATGGGGGTTTACAATTTTGAA
AATGGAAAGGTTGAATCTTTTTATTCTGGGGTGTCACTAAGTCCTGTTTGCCCGCCAACA
TGGGTTAACCCATCATTCGGATCATAA

Peptide Sequence

PEP ID

PGSC0003DMP400065451
PEP Infomation

pacid=37450696 transcript=PGSC0003DMT400093776 locus=PGSC0003DMG400043347 ID=PGSC0003DMT400093776.v4.03 annot-version=v4.03
Sequence

MANLSELPSDLISTVAERVKVIEDFIAFGAVCISWRTAATRDNFDVSSQQIPLLMLADKD
DDYREFYSLSKHKVSRIFLPEIRGRRCFPSEGGWMFTDSCTGEFNLFHPFSRTQIQLPPQ
NALKEALQKDAEITHYTIDKAVLSANPSLTSDYVLVISDLTYGRGDLAFWRPGDVNWTKI
VMRRKARFNSLFHHKGKFYAFNYHGELWVFDVPGCSIPEPIVEPRRLTRLIDPILHQPDT
QYYFVEISGALLFLIRFLNNTYTSDYETIKFKVFEIDVIKDQLNEINTLGDSTIFLGRNG
ATAMVTGLKPNHIYFTDDVFESYFALEAGGGKDMGVYNFENGKVESFYSGVSLSPVCPPT
WVNPSFGS*

Transcript Sequence

Transcript ID

PGSC0003DMT400093776
Transcript Infomation

pacid=37450696 locus=PGSC0003DMG400043347 ID=PGSC0003DMT400093776.v4.03 annot-version=v4.03
Sequence

ATGGCGAACTTGTCAGAATTGCCATCCGACCTCATTAGTACAGTTGCCGAGCGTGTCAAA
GTGATTGAAGATTTTATTGCTTTTGGTGCTGTTTGTATCTCATGGCGAACTGCTGCCACA
AGAGATAATTTTGATGTATCCTCCCAACAAATTCCATTGCTTATGCTAGCAGATAAAGAT
GATGATTATCGAGAATTTTACTCTCTTTCAAAACACAAAGTTTCACGCATATTTCTCCCA
GAAATTAGAGGGCGAAGATGTTTTCCATCAGAGGGAGGTTGGATGTTCACAGACTCATGT
ACAGGAGAATTTAACTTGTTTCATCCTTTCTCCCGTACCCAAATTCAACTTCCTCCACAA
AATGCCCTAAAGGAGGCTTTACAGAAAGACGCAGAAATAACTCATTACACTATTGACAAA
GCTGTCTTATCTGCCAATCCTTCTCTTACATCAGATTATGTTTTGGTGATTTCCGATCTT
ACATATGGTAGAGGTGATCTCGCCTTTTGGCGACCGGGAGACGTCAACTGGACTAAAATT
GTCATGAGAAGAAAGGCTAGATTCAACAGTCTCTTTCACCATAAGGGGAAATTTTATGCT
TTTAATTATCATGGCGAGTTATGGGTTTTTGATGTTCCCGGCTGTAGCATTCCTGAACCA
ATTGTAGAGCCGCGCCGGCTTACTCGTCTGATAGATCCTATATTACATCAACCAGATACT
CAATACTACTTTGTTGAGATATCGGGTGCACTGTTATTTCTTATTCGATTTTTGAATAAC
ACATATACTAGTGATTATGAAACCATTAAGTTTAAGGTATTTGAAATAGATGTAATCAAA
GATCAATTGAATGAGATTAATACTTTGGGAGATTCAACAATTTTTTTGGGACGTAATGGA
GCAACTGCTATGGTTACAGGGCTGAAACCTAATCACATTTACTTTACAGATGATGTGTTT
GAGAGCTATTTCGCCTTAGAAGCAGGTGGTGGAAAAGATATGGGGGTTTACAATTTTGAA
AATGGAAAGGTTGAATCTTTTTATTCTGGGGTGTCACTAAGTCCTGTTTGCCCGCCAACA
TGGGTTAACCCATCATTCGGATCATAA