Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400093622
CDS Infomation

pacid=37433127 polypeptide=PGSC0003DMP400065297 locus=PGSC0003DMG400043193 ID=PGSC0003DMT400093622.v4.03 annot-version=v4.03
Sequence

ATGAATCAGCAATTATCCCTTCTTCAACCACCTCCACCCCCATTTTCTACTCATGATTCT
AGTGGTGGTGGTGGTCTTTTCAATTTGAATAACAAGGTTAGTCCAAGTATACTTCTAGTA
ATCATTATTCTTGCTATTATCTTTTTTATATCTGGTTTGCTTCACTTAGCTGTTAGATGT
CTATTAAGGCCATCAAATAGAGATCCAGATGATTTAGATAATGTGACAGCCTTACAAGGT
CAATTGCAACAGCTTTTTAACCTTCATGATGCTGGTGTGGATCAATCTTTCATTGACACA
CTTCCTGTCTTTAATTACAAGTCCATTATTGGTGTCAAAGATCCCTTTGATTGTGCTGTT
TGTTTGTGTGAATTTGAGTCTGATGACAAACTTAGATGGTTACCAAAATGTAGTCATGCT
TTTCATATGGAGTGTATTGATACTTGGCTTTTGTCACATTCAACTTGCCCTCTGTGTAGA
GCTAGTTTATTGCCTGATTTCTCTTCACCATCACATAACAACCATACTTGTTCCCCTGTT
GTATTTGTTCTCGAGTCTGATAGTGGAAGTTCAAGAGAAAACAGCAGCACTATTGTTCCT
AATAGTCATGAATTGGTTGGGTCATTGAGGAGGAACAATTCAATTTCAAGATTGAGTTTG
AGTAGTTCACTTTTTGATGACAACATTAGTGTTTCTGATATTGTTGTTGTCGCGAAATCT
TGTGATGAAATCCAACCAAAAGAAGGGGAGATTGTTGAAAAAGTTGTACAAGTCAAGCTC
GGGAAATTCAAGAATGTGGATCCACAAGAACAACATCATGTAGGTAGTGGTGATGATCAA
GAAGGAAGTAGCAATAATATTGATATAAGAAGGTGTCTTTCAATGGGATCATTTGCTTAT
GTATTAGATGAGACCACAGCTTTACATGTCCCTATAAGGAACACACCATCAAAAAAGCAA
GCAATCAAGAAGCTAAATCATAGACAAGCAATGTCTGAATGTGGTGGATGTGATTCAAGA
AGGGAATTCAATGGATTTGAGGGATTCAAATTTGCTGAAAAACCAGTGAATAGCAACAAT
GAAAACAAGATTCTTGAACAAAGGAAATGCAAAAGAGAGAGCTTTTCAATATCCAAGATT
TGGTTAAGGGGGGGAAAAGATGAGAGTACTAATCCAAGAAGGGCATTTTCATTCCGGTTT
CCAGCCAACCAGAACATTCCAGTCGTGGCAGAGCCATCTGGCTCTGCCTCTGCCGCGACC
AAGAATGGTGGTAGGAGGACAGTCTCAGAGATTGATCTTGGTACATGGGAAAACAATGAA
GGATGTGATGAAGAAAATCAATGTTCCAATAGATTGGAATTTCAACCAAAGACACCATCT
TTTGCAAGAAGAACACTTTTTTGGCTTATGGGAAGACAAAACAAAGTTGTGCACTCTTCT
TATTCATCAAATCTCTAG

Peptide Sequence

PEP ID

PGSC0003DMP400065297
PEP Infomation

pacid=37433127 transcript=PGSC0003DMT400093622 locus=PGSC0003DMG400043193 ID=PGSC0003DMT400093622.v4.03 annot-version=v4.03
Sequence

MNQQLSLLQPPPPPFSTHDSSGGGGLFNLNNKVSPSILLVIIILAIIFFISGLLHLAVRC
LLRPSNRDPDDLDNVTALQGQLQQLFNLHDAGVDQSFIDTLPVFNYKSIIGVKDPFDCAV
CLCEFESDDKLRWLPKCSHAFHMECIDTWLLSHSTCPLCRASLLPDFSSPSHNNHTCSPV
VFVLESDSGSSRENSSTIVPNSHELVGSLRRNNSISRLSLSSSLFDDNISVSDIVVVAKS
CDEIQPKEGEIVEKVVQVKLGKFKNVDPQEQHHVGSGDDQEGSSNNIDIRRCLSMGSFAY
VLDETTALHVPIRNTPSKKQAIKKLNHRQAMSECGGCDSRREFNGFEGFKFAEKPVNSNN
ENKILEQRKCKRESFSISKIWLRGGKDESTNPRRAFSFRFPANQNIPVVAEPSGSASAAT
KNGGRRTVSEIDLGTWENNEGCDEENQCSNRLEFQPKTPSFARRTLFWLMGRQNKVVHSS
YSSNL*

Transcript Sequence

Transcript ID

PGSC0003DMT400093622
Transcript Infomation

pacid=37433127 locus=PGSC0003DMG400043193 ID=PGSC0003DMT400093622.v4.03 annot-version=v4.03
Sequence

ATGAATCAGCAATTATCCCTTCTTCAACCACCTCCACCCCCATTTTCTACTCATGATTCT
AGTGGTGGTGGTGGTCTTTTCAATTTGAATAACAAGGTTAGTCCAAGTATACTTCTAGTA
ATCATTATTCTTGCTATTATCTTTTTTATATCTGGTTTGCTTCACTTAGCTGTTAGATGT
CTATTAAGGCCATCAAATAGAGATCCAGATGATTTAGATAATGTGACAGCCTTACAAGGT
CAATTGCAACAGCTTTTTAACCTTCATGATGCTGGTGTGGATCAATCTTTCATTGACACA
CTTCCTGTCTTTAATTACAAGTCCATTATTGGTGTCAAAGATCCCTTTGATTGTGCTGTT
TGTTTGTGTGAATTTGAGTCTGATGACAAACTTAGATGGTTACCAAAATGTAGTCATGCT
TTTCATATGGAGTGTATTGATACTTGGCTTTTGTCACATTCAACTTGCCCTCTGTGTAGA
GCTAGTTTATTGCCTGATTTCTCTTCACCATCACATAACAACCATACTTGTTCCCCTGTT
GTATTTGTTCTCGAGTCTGATAGTGGAAGTTCAAGAGAAAACAGCAGCACTATTGTTCCT
AATAGTCATGAATTGGTTGGGTCATTGAGGAGGAACAATTCAATTTCAAGATTGAGTTTG
AGTAGTTCACTTTTTGATGACAACATTAGTGTTTCTGATATTGTTGTTGTCGCGAAATCT
TGTGATGAAATCCAACCAAAAGAAGGGGAGATTGTTGAAAAAGTTGTACAAGTCAAGCTC
GGGAAATTCAAGAATGTGGATCCACAAGAACAACATCATGTAGGTAGTGGTGATGATCAA
GAAGGAAGTAGCAATAATATTGATATAAGAAGGTGTCTTTCAATGGGATCATTTGCTTAT
GTATTAGATGAGACCACAGCTTTACATGTCCCTATAAGGAACACACCATCAAAAAAGCAA
GCAATCAAGAAGCTAAATCATAGACAAGCAATGTCTGAATGTGGTGGATGTGATTCAAGA
AGGGAATTCAATGGATTTGAGGGATTCAAATTTGCTGAAAAACCAGTGAATAGCAACAAT
GAAAACAAGATTCTTGAACAAAGGAAATGCAAAAGAGAGAGCTTTTCAATATCCAAGATT
TGGTTAAGGGGGGGAAAAGATGAGAGTACTAATCCAAGAAGGGCATTTTCATTCCGGTTT
CCAGCCAACCAGAACATTCCAGTCGTGGCAGAGCCATCTGGCTCTGCCTCTGCCGCGACC
AAGAATGGTGGTAGGAGGACAGTCTCAGAGATTGATCTTGGTACATGGGAAAACAATGAA
GGATGTGATGAAGAAAATCAATGTTCCAATAGATTGGAATTTCAACCAAAGACACCATCT
TTTGCAAGAAGAACACTTTTTTGGCTTATGGGAAGACAAAACAAAGTTGTGCACTCTTCT
TATTCATCAAATCTCTAG