Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400093243
CDS Infomation

pacid=37432405 polypeptide=PGSC0003DMP400064918 locus=PGSC0003DMG400042814 ID=PGSC0003DMT400093243.v4.03 annot-version=v4.03
Sequence

ATGGAGATCAAAAACAATTATTTTCTCCTCTTTTCTTTGATGTACCTATGCTTCTCTCTC
AAAACCCATCTCTCCATTGAAGCTGCTGACACCATTTCTGCAAATCAATCCCTTTCTGGA
GACCAAACAATTATCTCTTCAGGTGGAAAATTTAAACTTGGTTTCTTCCAACCAGGTAAT
TCTTCCAACTACTACATAGGCATGTGGTACGATAAAGTGGTTGAACAAACTGCTGTTTGG
GTTGCAAACAGGGAAAAACCAGTTCTTGATAAGAGCACTGCAGAGTTAAAGATCTTAGAT
GGTAATTTAGTACTGGTGGATGAATCTCAAACTCCAATTTGGTCCACAAATATCAGTTCC
AGCAACTCGAGTTCTGTTGTAGCAGTCCTCCGAGATGATGGTAATTTGATCTTGACAGAT
GGGTCTAATTCAACACCACCACTTTGGCAAAGTTTTAATAACCCCACCAATACTTGGTTG
CCTGGTTCTAAACTTTCTTACAACAAAGCCACCAGAACAAAGCAACTTCTTACTTCATGG
AAGAGTGCAGACGATCCTACACCTGGGCTGTATTCACTTGAACTCGACCCAAATGAGAAG
CAGTATATTATAAGGTTCAATAGAAGTGAGCAATATTGGAATACTGGACCATGGAATAAT
CGAATTTTCAGAGATGTGCCTGAGATGAGGACTAACTATATTTACAATTTTAGCTATGAG
GACAATCAGAATGAAAGCTATTTTACATATTCCCTTTATGATGATTCTATCATATCAAGA
TTCATTATGGATGGCTCTGGACAGATTAAGCAACTCACATGGTTGAATACTTCGAATCAG
TGGAATCTGTTCTGGTCTCAGCCAAGACAACAATGTGAAGTTTATGCATTTTGCGGGCCA
TTTGCTACCTGTCAGGAAACCAATCCCTTCTGTAATTGTTTGGATGGTTTCAAGCATAGT
TCAGAGACTGATTGGAATCAAAATGATTTTTCTGGAGGATGTGAGAGGCAAACGAAGTCG
CAATGTGGCAATGGTAAGGGGGAGAAAGATGACTTTTGGATGCATCCCCAGATGAAAGTA
CCTGAAAATGCTCAAAATATTTCTGCTGGAAGTGCTGAAGAATGCAGATCTACCTGTTTG
AATAATTGCACTTGCACTGCTTATACTTATGAAAGTTCATGCTCAATTTGGAATGGTGAA
CTCTTGAATATGCAGCAACTCCCACAAAATGATGGCAGGGGTGAGTTGATCTATGTCAGG
GTAGCTGCATCTGACATCCCAAAATCAAAGAGTAAAAAGGGAATTCCAATTGGTGTTTCT
GTGGGGTCTGCTGCTGCCGTACTGATCCTTCTGGGCATTCTTTTTGTTGTATTCCGGAGA
AGGCGTAGGCATATTGGAAGTGGGAAAATAGTGGAGGGTTCATTGGTTGCATTTGATTAC
AAAGACTTGCAACATGCGACTAAAAATTTCTCAGAGAAGTTGGGTGGTGGAGGCTTTGGT
TCTGTTTTCAAAGGGAAACTATCTGATTCATCTGTTATTGCTGTTAAAAGGCTCGATAGC
ATCAGCCAGGGAGAGAAGCAATTTCGATCAGAAGTCAGCACAATCGGGACAATCCAACAT
GTTAATCTTGTACGCCTTCGTGGATTTTGCTCTGAAGGTAACAAGAAACTGCTGGTTTAT
GATTACATGGAAAATGGATCCTTGGATTCACATATTTTTACCGAAAAGCAGTCAGATGTT
ATGGATTGGAAAACGAGGTACCAGGTGGCACTAGGGACAGCTAGAGGCTTGACTTATCTC
CATGAGAAGTGCAGGGACTGCATCATACATTGTGACATAAAGCCTGAAAACATCCTTCTT
GATGCACAATTATGCCCCAAAGTAGCAGATTTTGGCCTGGCAAAGCTTGTTGGGCGCGAT
TTTAGCAGAGTGCTTACTACTATGAGAGGAACAAGAGGTTATCTTGCACCAGAATGGATA
TCAGGGGTGGCCATTACAGCCAAAGCCGATGTTTATAGCTACGGCATGATGCTTTTGGAA
ATTGTATCAGGGAAGCGAAACTCGGAATACTCTCACGATGGGAAAGTGAAATTCTTTCCT
AGTTGGGCTGCACGTGTAGTAGTTGATGAAGGCGATATCCTTAGCCTATTGGACAATAGG
CTGGACAGAGCTGCTGATGCTGAGGAGGTGTCAAAAATATGTAAAGTTGCATATTGGTGC
ATCCAAGATGATGAATTCCAAAGACCCTCAATGGGCCAGGTTGTTCAGATTCTTGAAGGA
GTTTTGGATGTGAATTTGCCTCCTCTCCCACGCTCTCTTCAAGTTTATGCAGACAATGAG
GAGCACATCGTTTTCTTCACCGAGTCATCCTCGAGCCAGACTAGTTCACAAGCTCAGAGC
AAGACTTCAAGTACAACATCTCAATCTAAAAGCATCACAGAGTCTACGAATTCCAGGTCT
TGA

Peptide Sequence

PEP ID

PGSC0003DMP400064918
PEP Infomation

pacid=37432405 transcript=PGSC0003DMT400093243 locus=PGSC0003DMG400042814 ID=PGSC0003DMT400093243.v4.03 annot-version=v4.03
Sequence

MEIKNNYFLLFSLMYLCFSLKTHLSIEAADTISANQSLSGDQTIISSGGKFKLGFFQPGN
SSNYYIGMWYDKVVEQTAVWVANREKPVLDKSTAELKILDGNLVLVDESQTPIWSTNISS
SNSSSVVAVLRDDGNLILTDGSNSTPPLWQSFNNPTNTWLPGSKLSYNKATRTKQLLTSW
KSADDPTPGLYSLELDPNEKQYIIRFNRSEQYWNTGPWNNRIFRDVPEMRTNYIYNFSYE
DNQNESYFTYSLYDDSIISRFIMDGSGQIKQLTWLNTSNQWNLFWSQPRQQCEVYAFCGP
FATCQETNPFCNCLDGFKHSSETDWNQNDFSGGCERQTKSQCGNGKGEKDDFWMHPQMKV
PENAQNISAGSAEECRSTCLNNCTCTAYTYESSCSIWNGELLNMQQLPQNDGRGELIYVR
VAASDIPKSKSKKGIPIGVSVGSAAAVLILLGILFVVFRRRRRHIGSGKIVEGSLVAFDY
KDLQHATKNFSEKLGGGGFGSVFKGKLSDSSVIAVKRLDSISQGEKQFRSEVSTIGTIQH
VNLVRLRGFCSEGNKKLLVYDYMENGSLDSHIFTEKQSDVMDWKTRYQVALGTARGLTYL
HEKCRDCIIHCDIKPENILLDAQLCPKVADFGLAKLVGRDFSRVLTTMRGTRGYLAPEWI
SGVAITAKADVYSYGMMLLEIVSGKRNSEYSHDGKVKFFPSWAARVVVDEGDILSLLDNR
LDRAADAEEVSKICKVAYWCIQDDEFQRPSMGQVVQILEGVLDVNLPPLPRSLQVYADNE
EHIVFFTESSSSQTSSQAQSKTSSTTSQSKSITESTNSRS*

Transcript Sequence

Transcript ID

PGSC0003DMT400093243
Transcript Infomation

pacid=37432405 locus=PGSC0003DMG400042814 ID=PGSC0003DMT400093243.v4.03 annot-version=v4.03
Sequence

ATGGAGATCAAAAACAATTATTTTCTCCTCTTTTCTTTGATGTACCTATGCTTCTCTCTC
AAAACCCATCTCTCCATTGAAGCTGCTGACACCATTTCTGCAAATCAATCCCTTTCTGGA
GACCAAACAATTATCTCTTCAGGTGGAAAATTTAAACTTGGTTTCTTCCAACCAGGTAAT
TCTTCCAACTACTACATAGGCATGTGGTACGATAAAGTGGTTGAACAAACTGCTGTTTGG
GTTGCAAACAGGGAAAAACCAGTTCTTGATAAGAGCACTGCAGAGTTAAAGATCTTAGAT
GGTAATTTAGTACTGGTGGATGAATCTCAAACTCCAATTTGGTCCACAAATATCAGTTCC
AGCAACTCGAGTTCTGTTGTAGCAGTCCTCCGAGATGATGGTAATTTGATCTTGACAGAT
GGGTCTAATTCAACACCACCACTTTGGCAAAGTTTTAATAACCCCACCAATACTTGGTTG
CCTGGTTCTAAACTTTCTTACAACAAAGCCACCAGAACAAAGCAACTTCTTACTTCATGG
AAGAGTGCAGACGATCCTACACCTGGGCTGTATTCACTTGAACTCGACCCAAATGAGAAG
CAGTATATTATAAGGTTCAATAGAAGTGAGCAATATTGGAATACTGGACCATGGAATAAT
CGAATTTTCAGAGATGTGCCTGAGATGAGGACTAACTATATTTACAATTTTAGCTATGAG
GACAATCAGAATGAAAGCTATTTTACATATTCCCTTTATGATGATTCTATCATATCAAGA
TTCATTATGGATGGCTCTGGACAGATTAAGCAACTCACATGGTTGAATACTTCGAATCAG
TGGAATCTGTTCTGGTCTCAGCCAAGACAACAATGTGAAGTTTATGCATTTTGCGGGCCA
TTTGCTACCTGTCAGGAAACCAATCCCTTCTGTAATTGTTTGGATGGTTTCAAGCATAGT
TCAGAGACTGATTGGAATCAAAATGATTTTTCTGGAGGATGTGAGAGGCAAACGAAGTCG
CAATGTGGCAATGGTAAGGGGGAGAAAGATGACTTTTGGATGCATCCCCAGATGAAAGTA
CCTGAAAATGCTCAAAATATTTCTGCTGGAAGTGCTGAAGAATGCAGATCTACCTGTTTG
AATAATTGCACTTGCACTGCTTATACTTATGAAAGTTCATGCTCAATTTGGAATGGTGAA
CTCTTGAATATGCAGCAACTCCCACAAAATGATGGCAGGGGTGAGTTGATCTATGTCAGG
GTAGCTGCATCTGACATCCCAAAATCAAAGAGTAAAAAGGGAATTCCAATTGGTGTTTCT
GTGGGGTCTGCTGCTGCCGTACTGATCCTTCTGGGCATTCTTTTTGTTGTATTCCGGAGA
AGGCGTAGGCATATTGGAAGTGGGAAAATAGTGGAGGGTTCATTGGTTGCATTTGATTAC
AAAGACTTGCAACATGCGACTAAAAATTTCTCAGAGAAGTTGGGTGGTGGAGGCTTTGGT
TCTGTTTTCAAAGGGAAACTATCTGATTCATCTGTTATTGCTGTTAAAAGGCTCGATAGC
ATCAGCCAGGGAGAGAAGCAATTTCGATCAGAAGTCAGCACAATCGGGACAATCCAACAT
GTTAATCTTGTACGCCTTCGTGGATTTTGCTCTGAAGGTAACAAGAAACTGCTGGTTTAT
GATTACATGGAAAATGGATCCTTGGATTCACATATTTTTACCGAAAAGCAGTCAGATGTT
ATGGATTGGAAAACGAGGTACCAGGTGGCACTAGGGACAGCTAGAGGCTTGACTTATCTC
CATGAGAAGTGCAGGGACTGCATCATACATTGTGACATAAAGCCTGAAAACATCCTTCTT
GATGCACAATTATGCCCCAAAGTAGCAGATTTTGGCCTGGCAAAGCTTGTTGGGCGCGAT
TTTAGCAGAGTGCTTACTACTATGAGAGGAACAAGAGGTTATCTTGCACCAGAATGGATA
TCAGGGGTGGCCATTACAGCCAAAGCCGATGTTTATAGCTACGGCATGATGCTTTTGGAA
ATTGTATCAGGGAAGCGAAACTCGGAATACTCTCACGATGGGAAAGTGAAATTCTTTCCT
AGTTGGGCTGCACGTGTAGTAGTTGATGAAGGCGATATCCTTAGCCTATTGGACAATAGG
CTGGACAGAGCTGCTGATGCTGAGGAGGTGTCAAAAATATGTAAAGTTGCATATTGGTGC
ATCCAAGATGATGAATTCCAAAGACCCTCAATGGGCCAGGTTGTTCAGATTCTTGAAGGA
GTTTTGGATGTGAATTTGCCTCCTCTCCCACGCTCTCTTCAAGTTTATGCAGACAATGAG
GAGCACATCGTTTTCTTCACCGAGTCATCCTCGAGCCAGACTAGTTCACAAGCTCAGAGC
AAGACTTCAAGTACAACATCTCAATCTAAAAGCATCACAGAGTCTACGAATTCCAGGTCT
TGA