Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400092403
CDS Infomation

pacid=37461689 polypeptide=PGSC0003DMP400064078 locus=PGSC0003DMG400041974 ID=PGSC0003DMT400092403.v4.03 annot-version=v4.03
Sequence

ATGCCTTCCGATGTATGTTGCATAGCTCTCTTCATTGCCTTCTTTCTGATTCCATTTGTG
AATTCAGTGTCCTTTCAAATATCTCGATTTGGACCGGACGTGACTGACATACTCTATGAA
GGAGATGCAGTCGCGTCTGTAGGAGAGATCGAGTTTAACAAAGCGAACTATCTATGTCGC
GTTGCTCATGCCATCTATAGAGAGAAAGTTCCACTTTGGGATCCTGATCATGACTCCACA
AAGCTAGCTGATTTCTCCACACGTTTTTCGTTCACTATAGATACTCAAAATCGTTCCTCA
TATGGTCATGGTATCGCGTTTTTCCTAGCTCCAGTTGGTTTTCGAATTCCACCTAACTCA
GATGGTGGTTTTCTTGGACTGTTCAATACAAGCACTAGTGATTCAGCTCAAAGCCAAATT
GTTTCTGTTGAGTTTGACTCATTTTCCAACGTCGAATGGGATCCTCCATTCGAGCACGTT
GGTATCAATAACAATTCAATTGCTTCATCTGTGACAACTCCTTGGAATGTTAGTTTACAT
AGTGGTGATCCTATTGAGACATGGATTACTTACAATGCTACAACAAATAATCTTAGTGTC
ATTTGGAACTATGGAACAGGCCCGAATTCGAGCATGTTTTACATAATAAACCTCAGAGAT
GTTCTGCCTCCATGGGTCACAATCGGATTCTCTGCTGCAACAGGACAAAATGTCGAGAGA
CATACACTTGAATCATGGGAATTCAGCTCGAGTCTTGATATAACAGAGTTAGGTGGAAAT
GACCGTGAAAAGATTGGACTGATTGCAGGGCTAACAACATTAGGTGGGATTTTGTTTGTG
AGCGCGATTTTGGCTTTGGTAGTTTTGAGAAAATGTAGACGAAAGGTGAAGGGAAATCCA
GAGACAATAAGCTTAACATCATTCAATGATGATCTTGAAAAGGGGGCAGGGCCAAGAAAG
TTTTCGTATAAAGAGTTAGATACTTCAACTAATCATTTCTCAGAGGAACGAAAATTAGGC
GAAGGGGGATTTGGAGAAGTTTACAAAGGGTACCTTATCGATCTTGACATAGCGGTTGCT
GTAAAGAAGATCTCGAGAGGGTCTAAGCAGGGGAAAAAGGAATACATAACCGAGGTGAAG
GTTATTAGTCGATTAAGGCATAGAAATCTTGTGCAACTAATCGGTTGGTGTCATGATCAA
GGTGAGTTCTTACTTGTTTACGAATTCATGCCAAATGGTAGCTTAGATTTTCATTTGTTT
GGTAAGAAGAATCCTCTTAGTTGGACTATGAGGTACAAGATTTCACTTGGTTTAGCATCC
GCGTTGCTCTATCTACACGAAGAATGGGAACAATGTGTGATCCACAGAGACATAAAATCG
AGCAACATAATGCTAGATTCAAGTTTTAATGTCAAGCTTGGTGATTTTGGCCTAGCTAGA
CTAATGGACCATGAATTAGGTCCTCAGACTACAGGGCTAGCCGGAACTTTAGGTTATTTG
GCTCCGGAATACATAAAAACAGGACGAGCAAGCAAAGAGTCGGATGTATACAGCTTCGGA
ATAGTTGCATTAGAAATTGCAACAGGAAGAAAATCAGTTGATCCAGGGACAGGGAAATGT
GATGCAGGATTAGTAGAGTATGTTTGGGATTTTTATGAAAAAGGGAAACTTCTTTCTGTT
GTTGATGAGAAATTAAACATGGATTTCGAACAAGAACAAGTAGAACGATTGATGATTATC
GCGTTGTGGTGTGCTCATCCAGAGAGCAATCTAAGGCCATCGATAAAACAAGCAATTCAT
GTTCTGAATTTCGAGGCATCGTTGCCTAATCTTCCAATGAAGATGCCTGTTCCTGTGTAC
TATTCACCTAGACCATGTGGCGAACCAACAGTTAGCTCGGGGGAGCCTACGATGACTTAC
ACAAGCATCGATGTGGGTCGATAA

Peptide Sequence

PEP ID

PGSC0003DMP400064078
PEP Infomation

pacid=37461689 transcript=PGSC0003DMT400092403 locus=PGSC0003DMG400041974 ID=PGSC0003DMT400092403.v4.03 annot-version=v4.03
Sequence

MPSDVCCIALFIAFFLIPFVNSVSFQISRFGPDVTDILYEGDAVASVGEIEFNKANYLCR
VAHAIYREKVPLWDPDHDSTKLADFSTRFSFTIDTQNRSSYGHGIAFFLAPVGFRIPPNS
DGGFLGLFNTSTSDSAQSQIVSVEFDSFSNVEWDPPFEHVGINNNSIASSVTTPWNVSLH
SGDPIETWITYNATTNNLSVIWNYGTGPNSSMFYIINLRDVLPPWVTIGFSAATGQNVER
HTLESWEFSSSLDITELGGNDREKIGLIAGLTTLGGILFVSAILALVVLRKCRRKVKGNP
ETISLTSFNDDLEKGAGPRKFSYKELDTSTNHFSEERKLGEGGFGEVYKGYLIDLDIAVA
VKKISRGSKQGKKEYITEVKVISRLRHRNLVQLIGWCHDQGEFLLVYEFMPNGSLDFHLF
GKKNPLSWTMRYKISLGLASALLYLHEEWEQCVIHRDIKSSNIMLDSSFNVKLGDFGLAR
LMDHELGPQTTGLAGTLGYLAPEYIKTGRASKESDVYSFGIVALEIATGRKSVDPGTGKC
DAGLVEYVWDFYEKGKLLSVVDEKLNMDFEQEQVERLMIIALWCAHPESNLRPSIKQAIH
VLNFEASLPNLPMKMPVPVYYSPRPCGEPTVSSGEPTMTYTSIDVGR*

Transcript Sequence

Transcript ID

PGSC0003DMT400092403
Transcript Infomation

pacid=37461689 locus=PGSC0003DMG400041974 ID=PGSC0003DMT400092403.v4.03 annot-version=v4.03
Sequence

ATGCCTTCCGATGTATGTTGCATAGCTCTCTTCATTGCCTTCTTTCTGATTCCATTTGTG
AATTCAGTGTCCTTTCAAATATCTCGATTTGGACCGGACGTGACTGACATACTCTATGAA
GGAGATGCAGTCGCGTCTGTAGGAGAGATCGAGTTTAACAAAGCGAACTATCTATGTCGC
GTTGCTCATGCCATCTATAGAGAGAAAGTTCCACTTTGGGATCCTGATCATGACTCCACA
AAGCTAGCTGATTTCTCCACACGTTTTTCGTTCACTATAGATACTCAAAATCGTTCCTCA
TATGGTCATGGTATCGCGTTTTTCCTAGCTCCAGTTGGTTTTCGAATTCCACCTAACTCA
GATGGTGGTTTTCTTGGACTGTTCAATACAAGCACTAGTGATTCAGCTCAAAGCCAAATT
GTTTCTGTTGAGTTTGACTCATTTTCCAACGTCGAATGGGATCCTCCATTCGAGCACGTT
GGTATCAATAACAATTCAATTGCTTCATCTGTGACAACTCCTTGGAATGTTAGTTTACAT
AGTGGTGATCCTATTGAGACATGGATTACTTACAATGCTACAACAAATAATCTTAGTGTC
ATTTGGAACTATGGAACAGGCCCGAATTCGAGCATGTTTTACATAATAAACCTCAGAGAT
GTTCTGCCTCCATGGGTCACAATCGGATTCTCTGCTGCAACAGGACAAAATGTCGAGAGA
CATACACTTGAATCATGGGAATTCAGCTCGAGTCTTGATATAACAGAGTTAGGTGGAAAT
GACCGTGAAAAGATTGGACTGATTGCAGGGCTAACAACATTAGGTGGGATTTTGTTTGTG
AGCGCGATTTTGGCTTTGGTAGTTTTGAGAAAATGTAGACGAAAGGTGAAGGGAAATCCA
GAGACAATAAGCTTAACATCATTCAATGATGATCTTGAAAAGGGGGCAGGGCCAAGAAAG
TTTTCGTATAAAGAGTTAGATACTTCAACTAATCATTTCTCAGAGGAACGAAAATTAGGC
GAAGGGGGATTTGGAGAAGTTTACAAAGGGTACCTTATCGATCTTGACATAGCGGTTGCT
GTAAAGAAGATCTCGAGAGGGTCTAAGCAGGGGAAAAAGGAATACATAACCGAGGTGAAG
GTTATTAGTCGATTAAGGCATAGAAATCTTGTGCAACTAATCGGTTGGTGTCATGATCAA
GGTGAGTTCTTACTTGTTTACGAATTCATGCCAAATGGTAGCTTAGATTTTCATTTGTTT
GGTAAGAAGAATCCTCTTAGTTGGACTATGAGGTACAAGATTTCACTTGGTTTAGCATCC
GCGTTGCTCTATCTACACGAAGAATGGGAACAATGTGTGATCCACAGAGACATAAAATCG
AGCAACATAATGCTAGATTCAAGTTTTAATGTCAAGCTTGGTGATTTTGGCCTAGCTAGA
CTAATGGACCATGAATTAGGTCCTCAGACTACAGGGCTAGCCGGAACTTTAGGTTATTTG
GCTCCGGAATACATAAAAACAGGACGAGCAAGCAAAGAGTCGGATGTATACAGCTTCGGA
ATAGTTGCATTAGAAATTGCAACAGGAAGAAAATCAGTTGATCCAGGGACAGGGAAATGT
GATGCAGGATTAGTAGAGTATGTTTGGGATTTTTATGAAAAAGGGAAACTTCTTTCTGTT
GTTGATGAGAAATTAAACATGGATTTCGAACAAGAACAAGTAGAACGATTGATGATTATC
GCGTTGTGGTGTGCTCATCCAGAGAGCAATCTAAGGCCATCGATAAAACAAGCAATTCAT
GTTCTGAATTTCGAGGCATCGTTGCCTAATCTTCCAATGAAGATGCCTGTTCCTGTGTAC
TATTCACCTAGACCATGTGGCGAACCAACAGTTAGCTCGGGGGAGCCTACGATGACTTAC
ACAAGCATCGATGTGGGTCGATAA