Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400092251
CDS Infomation

pacid=37465900 polypeptide=PGSC0003DMP400063926 locus=PGSC0003DMG400041822 ID=PGSC0003DMT400092251.v4.03 annot-version=v4.03
Sequence

ATGGAGAATCAGCGATTCAAAGCAAAGGACACCCATAATTCGAAATTCAAAACTTATCTC
ACTGCCTCTGAATACTTTCTTCATCAAAGAAACTTCGAAGATTGTCGTAATTACGCCTTA
AAAGCCATTGAAATCGACTCAAATCAAATTTCCCCTTCACAAATCCTCGCTATAGCGAAT
GTATTACTTCTCTCAACCACCATTAACGAACACACAAATTACTATTCTATCCTTAACCTT
CCTCTCTACACTCAAAACCCACAACTCATCAAAACCCATTTCACTAACGTTACGAATCTG
TTAAACCCTAACAAGAATCGGTACCCATTTGCTTCTGAAGCTTTTGGGGTTGTACTCAAA
GCTTGGTCTGTGCTTTCGAACCAGACCCAGAAAACCCGCTTTGATAACGAGTTGAAAAAC
AGGGGAGAAGATAGGGGTAGTTTTTGGACTGTCTGTCCTTACTGTTACTATGTGTATGAG
TTTTTGAAAGATTATGAAGATTGTTGTTTGAGATGTCAGAATGAGAAATGTAGAAGAGTG
TTTCATGGGGTGCCTATTGTGGGCCCATCTCCGCCACCTGAGGTGGCGGAGAAGGGTGAG
TATCATTGCTTCGGGTTCACCGTTTTGGGCAATGGTACTCACCCTTTGTGGTCCCCTTTT
GTGGGCACTAAGACTAATGAGAATAACGTTGAGTCTGAAATCGCGGGAGAAAAGACTAAC
GAGAAGAATAATGTGGATGAGTTCATTGAAATTTCCGATGATGAGGATGAAAATGGGGGA
AATGAGAAATCTTTAGGGGTCAAAGAGGTATTTGTGGAAACTAATGGTGTGGAAGTGGAT
ACGAGAGGTGATTTCAAGGAGAAAAGGGTAAAAATGGTGGGGAAGAGTTTAAATAAGGTG
TTGGGAAAAGGTAACAAAGTTAACATGAATGAGATTGTTTATAATGAGGGAAATGATGAT
TTCGAGACTAATGAGAATACTGTTGAGTTTGGTAACGAAGGAGATAATAATGTTGAGTTT
TTTATGGGAGATGATATCTATGTGAGGATGCAAGAAGAATTTGATATTGGGACATTGTTT
TTATGA

Peptide Sequence

PEP ID

PGSC0003DMP400063926
PEP Infomation

pacid=37465900 transcript=PGSC0003DMT400092251 locus=PGSC0003DMG400041822 ID=PGSC0003DMT400092251.v4.03 annot-version=v4.03
Sequence

MENQRFKAKDTHNSKFKTYLTASEYFLHQRNFEDCRNYALKAIEIDSNQISPSQILAIAN
VLLLSTTINEHTNYYSILNLPLYTQNPQLIKTHFTNVTNLLNPNKNRYPFASEAFGVVLK
AWSVLSNQTQKTRFDNELKNRGEDRGSFWTVCPYCYYVYEFLKDYEDCCLRCQNEKCRRV
FHGVPIVGPSPPPEVAEKGEYHCFGFTVLGNGTHPLWSPFVGTKTNENNVESEIAGEKTN
EKNNVDEFIEISDDEDENGGNEKSLGVKEVFVETNGVEVDTRGDFKEKRVKMVGKSLNKV
LGKGNKVNMNEIVYNEGNDDFETNENTVEFGNEGDNNVEFFMGDDIYVRMQEEFDIGTLF
L*

Transcript Sequence

Transcript ID

PGSC0003DMT400092251
Transcript Infomation

pacid=37465900 locus=PGSC0003DMG400041822 ID=PGSC0003DMT400092251.v4.03 annot-version=v4.03
Sequence

ATGGAGAATCAGCGATTCAAAGCAAAGGACACCCATAATTCGAAATTCAAAACTTATCTC
ACTGCCTCTGAATACTTTCTTCATCAAAGAAACTTCGAAGATTGTCGTAATTACGCCTTA
AAAGCCATTGAAATCGACTCAAATCAAATTTCCCCTTCACAAATCCTCGCTATAGCGAAT
GTATTACTTCTCTCAACCACCATTAACGAACACACAAATTACTATTCTATCCTTAACCTT
CCTCTCTACACTCAAAACCCACAACTCATCAAAACCCATTTCACTAACGTTACGAATCTG
TTAAACCCTAACAAGAATCGGTACCCATTTGCTTCTGAAGCTTTTGGGGTTGTACTCAAA
GCTTGGTCTGTGCTTTCGAACCAGACCCAGAAAACCCGCTTTGATAACGAGTTGAAAAAC
AGGGGAGAAGATAGGGGTAGTTTTTGGACTGTCTGTCCTTACTGTTACTATGTGTATGAG
TTTTTGAAAGATTATGAAGATTGTTGTTTGAGATGTCAGAATGAGAAATGTAGAAGAGTG
TTTCATGGGGTGCCTATTGTGGGCCCATCTCCGCCACCTGAGGTGGCGGAGAAGGGTGAG
TATCATTGCTTCGGGTTCACCGTTTTGGGCAATGGTACTCACCCTTTGTGGTCCCCTTTT
GTGGGCACTAAGACTAATGAGAATAACGTTGAGTCTGAAATCGCGGGAGAAAAGACTAAC
GAGAAGAATAATGTGGATGAGTTCATTGAAATTTCCGATGATGAGGATGAAAATGGGGGA
AATGAGAAATCTTTAGGGGTCAAAGAGGTATTTGTGGAAACTAATGGTGTGGAAGTGGAT
ACGAGAGGTGATTTCAAGGAGAAAAGGGTAAAAATGGTGGGGAAGAGTTTAAATAAGGTG
TTGGGAAAAGGTAACAAAGTTAACATGAATGAGATTGTTTATAATGAGGGAAATGATGAT
TTCGAGACTAATGAGAATACTGTTGAGTTTGGTAACGAAGGAGATAATAATGTTGAGTTT
TTTATGGGAGATGATATCTATGTGAGGATGCAAGAAGAATTTGATATTGGGACATTGTTT
TTATGA