Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400092196
CDS Infomation

pacid=37450793 polypeptide=PGSC0003DMP400063871 locus=PGSC0003DMG400041767 ID=PGSC0003DMT400092196.v4.03 annot-version=v4.03
Sequence

ATGGCTTCAATTTCAGCAGCTTCTGCAACTGCTGCTGCTGCTTCTACAAAGATTAATACC
AGTGGTGGTAGTGTTCTTCCTTCTAAATCCTCTAAGCTTATCCTTTCATCTTCTTTTACA
CCAACCCCATCAACCCTTTTTCTCCATTCACCAGCCACTACTACACCTTCTTCTTCTACC
CGCCACCGCCGGTTTACTGTCCGAGCTGCGCGTGGTAAATTCGAAAGGAAGAAACCCCAT
GTCAATATTGGTACAATTGGCCATGTTGACCATGGGAAAACCACACTTACAGCTGCTTTG
ACCATGGCGCTTGCTTCTCTGGGTAACTCCACCCCCAAGAAGTATGATGAAATTGATGCT
GCCCCTGAAGAAAGGGCTCGTGGTATTACGATTAATACTGCCACAGTGGAGTATGAAACT
GAAAATCGGCATTACGCTCATGTGGATTGCCCTGGTCACGCTGATTATGTGAAGAATATG
ATTACTGGTGCTGCTCAAATGGATGGAGCTATACTTGTTGTTTCAGGTGCTGATGGTCCA
ATGCCGCAGACTAAGGAACATATTTTGCTTGCTAAGCAAGTGGGTGTCCCTAATATGGTT
GTTTTCTTGAACAAAGAGGACCAAGTTGATGATGAGGAGTTGCTTGAGCTTGTTGAGTTG
GAGGTAAGAGAGTTATTGTCAAGTTATGAGTTTCCTGGTGATGATATTCCTATTCATTGT
GGGTCTGCCCTTTTGGCGTTGGAGGCTTTAATGGCTAATCCTAGTATTAAAAGGGGTGAT
GATCAATGGGTTGATAAGATTTATAAATTGATGGACTCTGTTGATGAATATATTCCTATT
CCACAAAGACAAACTGAATTGCCTTTCTTGATGGCTATTGAAGATGTGTTTTCTATTACT
GGTAGAGGTACAGTGGCTACAGGGAGAGTGGAGAGAGGGACTGTTAAGACAGGGGAAATT
GTTGATATAGTTGGATTGAAGGACACTAGGAACACTACAGTAACAGGAGTTGAGATGTTT
CAGAAGATATTGGATGAAGCAATGGCAGGAGATAATGTGGGGTTGTTGTTGAGAGGTATT
CAAAAGATCGATATTCAAAGAGGAATGGTGTTGGCAAAACCTGGATCAATTACTCCACAC
ACCAAGTTTGAAGCTTTGGTGTATGTGTTGAAAAAGGAAGAAGGTGGCAGGCATTCCCCT
TTCTTTGCTGGTTATAGGCCACAGTTTTACATGAGAACAACTGATGTGACTGGAAAGGTT
ACTGCTATTATGACTGACAAGGGAGAGGAATCTAAGATGGTCATGCCTGGTGATCGCGTA
AACATGGTGGTCGAGCTCATTATGCCAGTTGCTTGTGAGCAGGGAATGAGGTTCGCTATT
AGGGAAGGAGGAAAGACTGTCGGAGCTGGTGTTATTCAGAAAATCTTAGAATGA

Peptide Sequence

PEP ID

PGSC0003DMP400063871
PEP Infomation

pacid=37450793 transcript=PGSC0003DMT400092196 locus=PGSC0003DMG400041767 ID=PGSC0003DMT400092196.v4.03 annot-version=v4.03
Sequence

MASISAASATAAAASTKINTSGGSVLPSKSSKLILSSSFTPTPSTLFLHSPATTTPSSST
RHRRFTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALASLGNSTPKKYDEIDA
APEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGP
MPQTKEHILLAKQVGVPNMVVFLNKEDQVDDEELLELVELEVRELLSSYEFPGDDIPIHC
GSALLALEALMANPSIKRGDDQWVDKIYKLMDSVDEYIPIPQRQTELPFLMAIEDVFSIT
GRGTVATGRVERGTVKTGEIVDIVGLKDTRNTTVTGVEMFQKILDEAMAGDNVGLLLRGI
QKIDIQRGMVLAKPGSITPHTKFEALVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKV
TAIMTDKGEESKMVMPGDRVNMVVELIMPVACEQGMRFAIREGGKTVGAGVIQKILE*

Transcript Sequence

Transcript ID

PGSC0003DMT400092196
Transcript Infomation

pacid=37450793 locus=PGSC0003DMG400041767 ID=PGSC0003DMT400092196.v4.03 annot-version=v4.03
Sequence

ATGGCTTCAATTTCAGCAGCTTCTGCAACTGCTGCTGCTGCTTCTACAAAGATTAATACC
AGTGGTGGTAGTGTTCTTCCTTCTAAATCCTCTAAGCTTATCCTTTCATCTTCTTTTACA
CCAACCCCATCAACCCTTTTTCTCCATTCACCAGCCACTACTACACCTTCTTCTTCTACC
CGCCACCGCCGGTTTACTGTCCGAGCTGCGCGTGGTAAATTCGAAAGGAAGAAACCCCAT
GTCAATATTGGTACAATTGGCCATGTTGACCATGGGAAAACCACACTTACAGCTGCTTTG
ACCATGGCGCTTGCTTCTCTGGGTAACTCCACCCCCAAGAAGTATGATGAAATTGATGCT
GCCCCTGAAGAAAGGGCTCGTGGTATTACGATTAATACTGCCACAGTGGAGTATGAAACT
GAAAATCGGCATTACGCTCATGTGGATTGCCCTGGTCACGCTGATTATGTGAAGAATATG
ATTACTGGTGCTGCTCAAATGGATGGAGCTATACTTGTTGTTTCAGGTGCTGATGGTCCA
ATGCCGCAGACTAAGGAACATATTTTGCTTGCTAAGCAAGTGGGTGTCCCTAATATGGTT
GTTTTCTTGAACAAAGAGGACCAAGTTGATGATGAGGAGTTGCTTGAGCTTGTTGAGTTG
GAGGTAAGAGAGTTATTGTCAAGTTATGAGTTTCCTGGTGATGATATTCCTATTCATTGT
GGGTCTGCCCTTTTGGCGTTGGAGGCTTTAATGGCTAATCCTAGTATTAAAAGGGGTGAT
GATCAATGGGTTGATAAGATTTATAAATTGATGGACTCTGTTGATGAATATATTCCTATT
CCACAAAGACAAACTGAATTGCCTTTCTTGATGGCTATTGAAGATGTGTTTTCTATTACT
GGTAGAGGTACAGTGGCTACAGGGAGAGTGGAGAGAGGGACTGTTAAGACAGGGGAAATT
GTTGATATAGTTGGATTGAAGGACACTAGGAACACTACAGTAACAGGAGTTGAGATGTTT
CAGAAGATATTGGATGAAGCAATGGCAGGAGATAATGTGGGGTTGTTGTTGAGAGGTATT
CAAAAGATCGATATTCAAAGAGGAATGGTGTTGGCAAAACCTGGATCAATTACTCCACAC
ACCAAGTTTGAAGCTTTGGTGTATGTGTTGAAAAAGGAAGAAGGTGGCAGGCATTCCCCT
TTCTTTGCTGGTTATAGGCCACAGTTTTACATGAGAACAACTGATGTGACTGGAAAGGTT
ACTGCTATTATGACTGACAAGGGAGAGGAATCTAAGATGGTCATGCCTGGTGATCGCGTA
AACATGGTGGTCGAGCTCATTATGCCAGTTGCTTGTGAGCAGGGAATGAGGTTCGCTATT
AGGGAAGGAGGAAAGACTGTCGGAGCTGGTGTTATTCAGAAAATCTTAGAATGA