Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400092187
CDS Infomation

pacid=37432022 polypeptide=PGSC0003DMP400063862 locus=PGSC0003DMG400041758 ID=PGSC0003DMT400092187.v4.03 annot-version=v4.03
Sequence

ATGCCTAATGATATCACCTTTAACATTCTTCTAAAACTTAATGTCAAATCGCTTTTACGA
TTCAAATGCGTTTGCAAATCATGGTGCTCTTTAATTGAAGATCCCCAATTCATCAAGCAG
CACTACGATATGTCTAAAAAGGATGTGAATCGTCATAAATTCTTCTTGACTGGTGGTGAA
TGGGAAAACAAGGACGACTATTTCTTCTCTATAGACACTCCACTTCAACATGATTCTGCT
GCCTCTCTTATCGAGTCTCTGATTCCAGGAATCAATCATTTGAGTAGCGTAAGTTTTGTT
AGTTCTTCTAATAATGGTATAATTCTTATGGTTTTCCCTTATGATTTTATCATTTTGTGG
AACCCGGCCATCAGGGAATTAAGAAAAATTCCAAGCTCAATCCCTAAAATTAAAAAGTCA
GGTAGAAAGCGGTTTCCTGCTATTTATGGTTTGGGCTATGTTTCGTCTATTGATGATTAT
AAAATAGTTAGAGTAGGGGGAAAAGATAACTCAAATGGTCATTTTGAGATCGATCTCTTT
TCGACGAGAGATAACTCGTGGAAATTGATTGGCAAGTTTCCTCCGTATAACTTTTTCCGT
GAAGGAGATATTGTTAGCATAGATGGTATCGTTTATATGATAGTGATGACAAATTTATCT
GAAAGTGTGAATGAATCTACTATATTAAGTTTTTGCTTGGAGAAGGAACAATTTGAAGAA
GTATTATTTCCAGATCGGATTCTAAGGTTCCAAAATCCAATTTTGCATGTTTTAGAAGAA
AATCTTTGTTTGACTAGAATGCATGATTTAGCAAGTCGTGATTTTGAAGTTTGGCATATG
AAAAAAGATGGATCAATGAGCACCACATGGAGTAAGATCTTGACGATTCCATCGATGTAT
TTATGGACGTTGCTTGAGGCGCGTGAAATTAATGAAAATTAA

Peptide Sequence

PEP ID

PGSC0003DMP400063862
PEP Infomation

pacid=37432022 transcript=PGSC0003DMT400092187 locus=PGSC0003DMG400041758 ID=PGSC0003DMT400092187.v4.03 annot-version=v4.03
Sequence

MPNDITFNILLKLNVKSLLRFKCVCKSWCSLIEDPQFIKQHYDMSKKDVNRHKFFLTGGE
WENKDDYFFSIDTPLQHDSAASLIESLIPGINHLSSVSFVSSSNNGIILMVFPYDFIILW
NPAIRELRKIPSSIPKIKKSGRKRFPAIYGLGYVSSIDDYKIVRVGGKDNSNGHFEIDLF
STRDNSWKLIGKFPPYNFFREGDIVSIDGIVYMIVMTNLSESVNESTILSFCLEKEQFEE
VLFPDRILRFQNPILHVLEENLCLTRMHDLASRDFEVWHMKKDGSMSTTWSKILTIPSMY
LWTLLEAREINEN*

Transcript Sequence

Transcript ID

PGSC0003DMT400092187
Transcript Infomation

pacid=37432022 locus=PGSC0003DMG400041758 ID=PGSC0003DMT400092187.v4.03 annot-version=v4.03
Sequence

ATGCCTAATGATATCACCTTTAACATTCTTCTAAAACTTAATGTCAAATCGCTTTTACGA
TTCAAATGCGTTTGCAAATCATGGTGCTCTTTAATTGAAGATCCCCAATTCATCAAGCAG
CACTACGATATGTCTAAAAAGGATGTGAATCGTCATAAATTCTTCTTGACTGGTGGTGAA
TGGGAAAACAAGGACGACTATTTCTTCTCTATAGACACTCCACTTCAACATGATTCTGCT
GCCTCTCTTATCGAGTCTCTGATTCCAGGAATCAATCATTTGAGTAGCGTAAGTTTTGTT
AGTTCTTCTAATAATGGTATAATTCTTATGGTTTTCCCTTATGATTTTATCATTTTGTGG
AACCCGGCCATCAGGGAATTAAGAAAAATTCCAAGCTCAATCCCTAAAATTAAAAAGTCA
GGTAGAAAGCGGTTTCCTGCTATTTATGGTTTGGGCTATGTTTCGTCTATTGATGATTAT
AAAATAGTTAGAGTAGGGGGAAAAGATAACTCAAATGGTCATTTTGAGATCGATCTCTTT
TCGACGAGAGATAACTCGTGGAAATTGATTGGCAAGTTTCCTCCGTATAACTTTTTCCGT
GAAGGAGATATTGTTAGCATAGATGGTATCGTTTATATGATAGTGATGACAAATTTATCT
GAAAGTGTGAATGAATCTACTATATTAAGTTTTTGCTTGGAGAAGGAACAATTTGAAGAA
GTATTATTTCCAGATCGGATTCTAAGGTTCCAAAATCCAATTTTGCATGTTTTAGAAGAA
AATCTTTGTTTGACTAGAATGCATGATTTAGCAAGTCGTGATTTTGAAGTTTGGCATATG
AAAAAAGATGGATCAATGAGCACCACATGGAGTAAGATCTTGACGATTCCATCGATGTAT
TTATGGACGTTGCTTGAGGCGCGTGAAATTAATGAAAATTAA