Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400092162
CDS Infomation

pacid=37425727 polypeptide=PGSC0003DMP400063837 locus=PGSC0003DMG400041733 ID=PGSC0003DMT400092162.v4.03 annot-version=v4.03
Sequence

ATGAACATTAAGGAGGTAAAACATTATCGAAAAGAGGATTGCCCATCAAAAGTTGGCAGC
AGATCTCAACAGCATACTCAGTTAAAGCAGACGCATCAAAGCATTGATAGATCATCATCT
GAAAAAAGATATTGCTTGAAGAAGTCTAAAGAGAGACTTTCTTCCAAATCTTTGGCTATA
TGGAAATGCCCTCCCAAGTTCCATTTGAACGAGAAATGGCTAGTGGTTGCTGGTGAAGAA
AGTAAAGAAACCAGTAAGCAGGAGGATAGGAAAAGGAGGGTGATTGAGGCGGTTTTCCCT
AATCGGTCTGCAATTCCTCCAAATACATCATCTGTCAAGATAGTTACTTCTCAAAAGCTA
CCTGATAATGGAAAATCGCTTCCAAAGTCTTTGTCAACCTTTCCAAATCCCAGAAAACCT
CCGAGAAACTCTTTTTTTTCTAAAAAGACCCCTTTTAATGTGCAATCTACTCCACTATAT
CATTCAAGATATCAAAATCTAACGGGATCTGAGCAAAGCCAAGTTTCTCCTAAACTACCT
GTTAGTTACAACTCTGTTCCCCAGTATAGGCCTACATTTAAAAATATCGGCACTCAGACT
GAAACTTTTCCAGACCAACCAGCTAATGAAAACCATGAGCCCAAGTATCGAACAACATAT
GAAAACCAGAATATTCCCCAGCTCAAGTCTCAAGTTTCTGGAATGGCACTTGCTAAGCAC
AACCCTATCACCGAATCTCCATCCACGCGTGATTTGACAGTTGACGTAGCCACAGCTGTA
GCTGCTCTTGCAAAAAGTCAAGAGCAGGGTAGTCGGATCGATACCAACTTATTGGTTAGG
CTTCTCCTCAACCCAGAAGAAATACCAAAGTTGATGAATGAACGTGGCATGAATACCAAT
GTTGCAACTGCTGCTGCAGTAGCTGTTTCTCTCAATACTGCCATGTCTAGGCCAGTGGAT
CTACTGGTTCCCTTGACCAGGACAAAACCGGACAAGGTAATTAACAAGCCCATTAATGAA
TGCCAAGCTCCCCATGCAGGATCTGGACAAAGTTTTGGGCCAAAGCCAATGGCAAAATCT
GTGCCTTTGATAATGACTAAGCCTGAAACATCTGTGAAAAGTGATTTGGTTAATGAACAA
GGGACCCCTCCTCAGGTAGAAACTGCAAACATTAGAGAGAGTAAGTCACTAACCTACTTC
TCTTCAGACCTTGATCTGGAAAATATTAAGAAACTGATTAGCAAATATGGAGTACCTGAC
AATGCAGGAGGAAAGCCATTAGTTAATTTTGAGTTGGTTTCTAGATATGGTCCTACCAGC
TTGCAGCCTAATCTGTCTCTTTCACCAAATGTTGGCCATACATCCCCTTCCTCCTCGATG
ACTAGTCATAGCCCTCTTCACAAGGATATCATCAATTACTACAAGTCCCTGATCAAGCAA
CGTGGAGAAAAAAGTGAGCCTATGGTTGATGAAAGCTTACAAAATACGAATCCTCATGGT
ACTACACGGGGGACAGATTTGTTAAAAAACCAAAAACCAATTCCGCACAGCTTGACACCC
TGTGTTTTCTTTAATAAACCTAAGGGATGCCATAATGGTTCCTATTATCGCTTCTTGCAT
GATATATCTGGTAAAAAGAGGTCTGGGGGGAGATCGAAAGGTCGGGATTCGAAGAGAATG
AAGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400063837
PEP Infomation

pacid=37425727 transcript=PGSC0003DMT400092162 locus=PGSC0003DMG400041733 ID=PGSC0003DMT400092162.v4.03 annot-version=v4.03
Sequence

MNIKEVKHYRKEDCPSKVGSRSQQHTQLKQTHQSIDRSSSEKRYCLKKSKERLSSKSLAI
WKCPPKFHLNEKWLVVAGEESKETSKQEDRKRRVIEAVFPNRSAIPPNTSSVKIVTSQKL
PDNGKSLPKSLSTFPNPRKPPRNSFFSKKTPFNVQSTPLYHSRYQNLTGSEQSQVSPKLP
VSYNSVPQYRPTFKNIGTQTETFPDQPANENHEPKYRTTYENQNIPQLKSQVSGMALAKH
NPITESPSTRDLTVDVATAVAALAKSQEQGSRIDTNLLVRLLLNPEEIPKLMNERGMNTN
VATAAAVAVSLNTAMSRPVDLLVPLTRTKPDKVINKPINECQAPHAGSGQSFGPKPMAKS
VPLIMTKPETSVKSDLVNEQGTPPQVETANIRESKSLTYFSSDLDLENIKKLISKYGVPD
NAGGKPLVNFELVSRYGPTSLQPNLSLSPNVGHTSPSSSMTSHSPLHKDIINYYKSLIKQ
RGEKSEPMVDESLQNTNPHGTTRGTDLLKNQKPIPHSLTPCVFFNKPKGCHNGSYYRFLH
DISGKKRSGGRSKGRDSKRMK*

Transcript Sequence

Transcript ID

PGSC0003DMT400092162
Transcript Infomation

pacid=37425727 locus=PGSC0003DMG400041733 ID=PGSC0003DMT400092162.v4.03 annot-version=v4.03
Sequence

ATGAACATTAAGGAGGTAAAACATTATCGAAAAGAGGATTGCCCATCAAAAGTTGGCAGC
AGATCTCAACAGCATACTCAGTTAAAGCAGACGCATCAAAGCATTGATAGATCATCATCT
GAAAAAAGATATTGCTTGAAGAAGTCTAAAGAGAGACTTTCTTCCAAATCTTTGGCTATA
TGGAAATGCCCTCCCAAGTTCCATTTGAACGAGAAATGGCTAGTGGTTGCTGGTGAAGAA
AGTAAAGAAACCAGTAAGCAGGAGGATAGGAAAAGGAGGGTGATTGAGGCGGTTTTCCCT
AATCGGTCTGCAATTCCTCCAAATACATCATCTGTCAAGATAGTTACTTCTCAAAAGCTA
CCTGATAATGGAAAATCGCTTCCAAAGTCTTTGTCAACCTTTCCAAATCCCAGAAAACCT
CCGAGAAACTCTTTTTTTTCTAAAAAGACCCCTTTTAATGTGCAATCTACTCCACTATAT
CATTCAAGATATCAAAATCTAACGGGATCTGAGCAAAGCCAAGTTTCTCCTAAACTACCT
GTTAGTTACAACTCTGTTCCCCAGTATAGGCCTACATTTAAAAATATCGGCACTCAGACT
GAAACTTTTCCAGACCAACCAGCTAATGAAAACCATGAGCCCAAGTATCGAACAACATAT
GAAAACCAGAATATTCCCCAGCTCAAGTCTCAAGTTTCTGGAATGGCACTTGCTAAGCAC
AACCCTATCACCGAATCTCCATCCACGCGTGATTTGACAGTTGACGTAGCCACAGCTGTA
GCTGCTCTTGCAAAAAGTCAAGAGCAGGGTAGTCGGATCGATACCAACTTATTGGTTAGG
CTTCTCCTCAACCCAGAAGAAATACCAAAGTTGATGAATGAACGTGGCATGAATACCAAT
GTTGCAACTGCTGCTGCAGTAGCTGTTTCTCTCAATACTGCCATGTCTAGGCCAGTGGAT
CTACTGGTTCCCTTGACCAGGACAAAACCGGACAAGGTAATTAACAAGCCCATTAATGAA
TGCCAAGCTCCCCATGCAGGATCTGGACAAAGTTTTGGGCCAAAGCCAATGGCAAAATCT
GTGCCTTTGATAATGACTAAGCCTGAAACATCTGTGAAAAGTGATTTGGTTAATGAACAA
GGGACCCCTCCTCAGGTAGAAACTGCAAACATTAGAGAGAGTAAGTCACTAACCTACTTC
TCTTCAGACCTTGATCTGGAAAATATTAAGAAACTGATTAGCAAATATGGAGTACCTGAC
AATGCAGGAGGAAAGCCATTAGTTAATTTTGAGTTGGTTTCTAGATATGGTCCTACCAGC
TTGCAGCCTAATCTGTCTCTTTCACCAAATGTTGGCCATACATCCCCTTCCTCCTCGATG
ACTAGTCATAGCCCTCTTCACAAGGATATCATCAATTACTACAAGTCCCTGATCAAGCAA
CGTGGAGAAAAAAGTGAGCCTATGGTTGATGAAAGCTTACAAAATACGAATCCTCATGGT
ACTACACGGGGGACAGATTTGTTAAAAAACCAAAAACCAATTCCGCACAGCTTGACACCC
TGTGTTTTCTTTAATAAACCTAAGGGATGCCATAATGGTTCCTATTATCGCTTCTTGCAT
GATATATCTGGTAAAAAGAGGTCTGGGGGGAGATCGAAAGGTCGGGATTCGAAGAGAATG
AAGTAA