Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400091842
CDS Infomation

pacid=37470725 polypeptide=PGSC0003DMP400063517 locus=PGSC0003DMG400041413 ID=PGSC0003DMT400091842.v4.03 annot-version=v4.03
Sequence

ATGGCAGGTTGGGCAGAACTCCCCAACGGTCTTATTGTTAACATTGCAAATCGTGTTAAA
GTGATTGAAGATTTCATTGCTTTTCGTGCTGTTTGCTCCTCGTGGCGAATTTCCACTATA
AAGGAAGATTTTGATGTGCTTTTGCCCCAAGTTCCGTTGCTAATGCTGGGTGCCAAATAT
GAAGATTATCGAGAATTTTATTCTCTTACCAAGAAGAAAGTTTCGCGCATATTCCTCCCA
GAAGCTAGAGGGTCAGAGTGTTTACCATCCGAGGGATGGCTCTGCACTGTGCTAAATGAT
ACGGGAGAGATGAATTTGTTGCACCCTTTCTCTCGCGAAAAAATACACCTTCCCTCTCGA
AAAGCCTTATTGACTTTTCATGATCTCCCTGCTTTAGACGGAGATTGTTGGAGCTGCGTA
GAGAGAGCTGACTTGTCTGCAAATCCTTCTCTTACGTCAGATTATGTACTCATGGTGCAT
CATTGTTCGCCTAGCTCTTGTTTGGCGTTTTGGAGACCTGGAGACCTCGATTGGACTCAT
ATTGATGTTGTTAATTACTCTGGGATTGCGGCTTTAATTTATCACAAGGGCCAATTTTAT
TCCATGAGTTATTTTGGAGAAGTTAGGGCTTATCGGGTTGCAGGGCGTAACACTACTGAT
CAACCAATGGTACAAATACGAATTCTAGCTGAGATGCACTACATTCAGGGTAACTTGCCT
GATGTTCAGTATTACTTTGTTGAGTTATCCGGTGCGCTATTACTTGTCTCCCGATTTGGC
AACATTACATTTGACGACGATGGAAACAGCATTTTCTACACCTTCAAATTTGAAGTCTCT
GAACTAGACGTAATCAGAGGTAAATTGAAGAAGGAGATGAAAACCTTGGGAGATTCATCA
ATCTTCTTGGGTCGCAATTGGGCAACTTGCATTGACTCTTGTAAATTTAATGGAATCAAG
CCTAATCACATATATTTTACCGATGATGGGTTTGAATACGACAGAGATGTAGAAGGAGGA
GGAGTCGGAAGAGATATGGGTGCTTATAATTTGGAAGATGAAGAAATTGAATCTTTTTAT
TCTGGACAATCAACAAGTTTAATCTGTCCACCAGCTTGGGTTATACCATCACTAATAATG
TGA

Peptide Sequence

PEP ID

PGSC0003DMP400063517
PEP Infomation

pacid=37470725 transcript=PGSC0003DMT400091842 locus=PGSC0003DMG400041413 ID=PGSC0003DMT400091842.v4.03 annot-version=v4.03
Sequence

MAGWAELPNGLIVNIANRVKVIEDFIAFRAVCSSWRISTIKEDFDVLLPQVPLLMLGAKY
EDYREFYSLTKKKVSRIFLPEARGSECLPSEGWLCTVLNDTGEMNLLHPFSREKIHLPSR
KALLTFHDLPALDGDCWSCVERADLSANPSLTSDYVLMVHHCSPSSCLAFWRPGDLDWTH
IDVVNYSGIAALIYHKGQFYSMSYFGEVRAYRVAGRNTTDQPMVQIRILAEMHYIQGNLP
DVQYYFVELSGALLLVSRFGNITFDDDGNSIFYTFKFEVSELDVIRGKLKKEMKTLGDSS
IFLGRNWATCIDSCKFNGIKPNHIYFTDDGFEYDRDVEGGGVGRDMGAYNLEDEEIESFY
SGQSTSLICPPAWVIPSLIM*

Transcript Sequence

Transcript ID

PGSC0003DMT400091842
Transcript Infomation

pacid=37470725 locus=PGSC0003DMG400041413 ID=PGSC0003DMT400091842.v4.03 annot-version=v4.03
Sequence

ATGGCAGGTTGGGCAGAACTCCCCAACGGTCTTATTGTTAACATTGCAAATCGTGTTAAA
GTGATTGAAGATTTCATTGCTTTTCGTGCTGTTTGCTCCTCGTGGCGAATTTCCACTATA
AAGGAAGATTTTGATGTGCTTTTGCCCCAAGTTCCGTTGCTAATGCTGGGTGCCAAATAT
GAAGATTATCGAGAATTTTATTCTCTTACCAAGAAGAAAGTTTCGCGCATATTCCTCCCA
GAAGCTAGAGGGTCAGAGTGTTTACCATCCGAGGGATGGCTCTGCACTGTGCTAAATGAT
ACGGGAGAGATGAATTTGTTGCACCCTTTCTCTCGCGAAAAAATACACCTTCCCTCTCGA
AAAGCCTTATTGACTTTTCATGATCTCCCTGCTTTAGACGGAGATTGTTGGAGCTGCGTA
GAGAGAGCTGACTTGTCTGCAAATCCTTCTCTTACGTCAGATTATGTACTCATGGTGCAT
CATTGTTCGCCTAGCTCTTGTTTGGCGTTTTGGAGACCTGGAGACCTCGATTGGACTCAT
ATTGATGTTGTTAATTACTCTGGGATTGCGGCTTTAATTTATCACAAGGGCCAATTTTAT
TCCATGAGTTATTTTGGAGAAGTTAGGGCTTATCGGGTTGCAGGGCGTAACACTACTGAT
CAACCAATGGTACAAATACGAATTCTAGCTGAGATGCACTACATTCAGGGTAACTTGCCT
GATGTTCAGTATTACTTTGTTGAGTTATCCGGTGCGCTATTACTTGTCTCCCGATTTGGC
AACATTACATTTGACGACGATGGAAACAGCATTTTCTACACCTTCAAATTTGAAGTCTCT
GAACTAGACGTAATCAGAGGTAAATTGAAGAAGGAGATGAAAACCTTGGGAGATTCATCA
ATCTTCTTGGGTCGCAATTGGGCAACTTGCATTGACTCTTGTAAATTTAATGGAATCAAG
CCTAATCACATATATTTTACCGATGATGGGTTTGAATACGACAGAGATGTAGAAGGAGGA
GGAGTCGGAAGAGATATGGGTGCTTATAATTTGGAAGATGAAGAAATTGAATCTTTTTAT
TCTGGACAATCAACAAGTTTAATCTGTCCACCAGCTTGGGTTATACCATCACTAATAATG
TGA