Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400091505
CDS Infomation

pacid=37471866 polypeptide=PGSC0003DMP400063180 locus=PGSC0003DMG400041076 ID=PGSC0003DMT400091505.v4.03 annot-version=v4.03
Sequence

ATGGATGCTTCAATGGAGATCAATCAAAAGTCGATTCGCGTTCTTATGTTTCCGTGGTTA
GGACATGGACACATCTCTCCTTTCTTTGAGCTAGCTAAAAAGCTCGTTAAGAGAAACTTC
ACTATTTTCTTATGCTCAACACCCGCGAACTTCATATCTATTAAACAAAAGCTCATCAAT
GAAGACTTAACCGAAAAAATCCACCTTGTTGATCTTCGACTTCCATCTCTTCCTGACCTA
CCTCCTCATTACCATACCACCAATGGTCTTCCTTCCCACCTCATGTCCACTCTCAAGAAG
GCCTTCGCGAAGGCTCGTCCAATTTTCACTCAAATTATCAATTCTATCGAGCCTGACTTA
CTTATTTATGATTTACTTCAACCATGGGCACCTAAGGTAGCCGCGGAGAAAAACATTCCA
TCTGTTGTTTTTGTTACTAGTAGCGCGACTATGTTCTCCTACATGTTTCATACTTTTAGG
TACCCTAACTCAGAGTTTCCTTTCTCTTCTATTTATTATCGCGATTATGAGCTAGCACGT
ATGGTTAAAAATCAAGAGTTGGAGCCAATTGAGCAACAACAAAAGGATAACACTAGTGTT
AAGTTGTGTTTCAAGAGGTCTTCTAACATTGTTTTGATCAAAGGTTTTAAGGAAATTGAT
GGTCAATATTGTGACTATATATCTAGTTTGACTAAAAAGAGAGTTGTTCTTGTTGGTCCA
CTTGTTCAAGAACCAACAAGTGAAGATGGTAATTCACAAATTTTAACATGGTTGAATCAA
AAGTCAAAAGGGTCAACTATTTTTGTGTCATTTGGGAGTGAATATTTTTTGTCACAAGAG
GATAGGGAAGAGATTGCTCATGGGTTGGAGAAAAGTAGGGTTAACTTCATTTGGGTTGTG
AGGTTTCCGAAAGGTGAGAAACTCAAACTTGAACAAGCGTTGCCACGAGGCTTTTTCAAG
AAAGTAGGTGAAAGAGGGATGGTAGTTGAAGATTGGGCCCCACAAGCAAAAATATTAGGA
AACCCTAATATTGGTGGATTTGTCAGTCACTGTGGATGGAATTCTGTCATGGAAAGCATG
AAAATTGGTGTGCCAATAATTGCTATGCCAATGCATCTTGATCAACCATTGAATGCTAGG
CTTGTGGAAGAAGTAGGTATTGGATTGGAAGTTGTTAGGGACAAAGATGGAAAACTTGAT
GGAGAACAAATTAGTGAAATTATCAATAAGGTTGTTTTGGAGAAAGAAGGAGAATCCATA
AGGGAAAAAGCTAAGATAATGAGTGAGACAATAAGAGTCAAAGGTGATGAAGAGATTGAT
GATGTTGTTCAAGAATTGTTCAACCTTTGCAAGACTAGATCAAATGTTGTCTAG

Peptide Sequence

PEP ID

PGSC0003DMP400063180
PEP Infomation

pacid=37471866 transcript=PGSC0003DMT400091505 locus=PGSC0003DMG400041076 ID=PGSC0003DMT400091505.v4.03 annot-version=v4.03
Sequence

MDASMEINQKSIRVLMFPWLGHGHISPFFELAKKLVKRNFTIFLCSTPANFISIKQKLIN
EDLTEKIHLVDLRLPSLPDLPPHYHTTNGLPSHLMSTLKKAFAKARPIFTQIINSIEPDL
LIYDLLQPWAPKVAAEKNIPSVVFVTSSATMFSYMFHTFRYPNSEFPFSSIYYRDYELAR
MVKNQELEPIEQQQKDNTSVKLCFKRSSNIVLIKGFKEIDGQYCDYISSLTKKRVVLVGP
LVQEPTSEDGNSQILTWLNQKSKGSTIFVSFGSEYFLSQEDREEIAHGLEKSRVNFIWVV
RFPKGEKLKLEQALPRGFFKKVGERGMVVEDWAPQAKILGNPNIGGFVSHCGWNSVMESM
KIGVPIIAMPMHLDQPLNARLVEEVGIGLEVVRDKDGKLDGEQISEIINKVVLEKEGESI
REKAKIMSETIRVKGDEEIDDVVQELFNLCKTRSNVV*

Transcript Sequence

Transcript ID

PGSC0003DMT400091505
Transcript Infomation

pacid=37471866 locus=PGSC0003DMG400041076 ID=PGSC0003DMT400091505.v4.03 annot-version=v4.03
Sequence

ATGGATGCTTCAATGGAGATCAATCAAAAGTCGATTCGCGTTCTTATGTTTCCGTGGTTA
GGACATGGACACATCTCTCCTTTCTTTGAGCTAGCTAAAAAGCTCGTTAAGAGAAACTTC
ACTATTTTCTTATGCTCAACACCCGCGAACTTCATATCTATTAAACAAAAGCTCATCAAT
GAAGACTTAACCGAAAAAATCCACCTTGTTGATCTTCGACTTCCATCTCTTCCTGACCTA
CCTCCTCATTACCATACCACCAATGGTCTTCCTTCCCACCTCATGTCCACTCTCAAGAAG
GCCTTCGCGAAGGCTCGTCCAATTTTCACTCAAATTATCAATTCTATCGAGCCTGACTTA
CTTATTTATGATTTACTTCAACCATGGGCACCTAAGGTAGCCGCGGAGAAAAACATTCCA
TCTGTTGTTTTTGTTACTAGTAGCGCGACTATGTTCTCCTACATGTTTCATACTTTTAGG
TACCCTAACTCAGAGTTTCCTTTCTCTTCTATTTATTATCGCGATTATGAGCTAGCACGT
ATGGTTAAAAATCAAGAGTTGGAGCCAATTGAGCAACAACAAAAGGATAACACTAGTGTT
AAGTTGTGTTTCAAGAGGTCTTCTAACATTGTTTTGATCAAAGGTTTTAAGGAAATTGAT
GGTCAATATTGTGACTATATATCTAGTTTGACTAAAAAGAGAGTTGTTCTTGTTGGTCCA
CTTGTTCAAGAACCAACAAGTGAAGATGGTAATTCACAAATTTTAACATGGTTGAATCAA
AAGTCAAAAGGGTCAACTATTTTTGTGTCATTTGGGAGTGAATATTTTTTGTCACAAGAG
GATAGGGAAGAGATTGCTCATGGGTTGGAGAAAAGTAGGGTTAACTTCATTTGGGTTGTG
AGGTTTCCGAAAGGTGAGAAACTCAAACTTGAACAAGCGTTGCCACGAGGCTTTTTCAAG
AAAGTAGGTGAAAGAGGGATGGTAGTTGAAGATTGGGCCCCACAAGCAAAAATATTAGGA
AACCCTAATATTGGTGGATTTGTCAGTCACTGTGGATGGAATTCTGTCATGGAAAGCATG
AAAATTGGTGTGCCAATAATTGCTATGCCAATGCATCTTGATCAACCATTGAATGCTAGG
CTTGTGGAAGAAGTAGGTATTGGATTGGAAGTTGTTAGGGACAAAGATGGAAAACTTGAT
GGAGAACAAATTAGTGAAATTATCAATAAGGTTGTTTTGGAGAAAGAAGGAGAATCCATA
AGGGAAAAAGCTAAGATAATGAGTGAGACAATAAGAGTCAAAGGTGATGAAGAGATTGAT
GATGTTGTTCAAGAATTGTTCAACCTTTGCAAGACTAGATCAAATGTTGTCTAG