Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400091049
CDS Infomation

pacid=37465466 polypeptide=PGSC0003DMP400062724 locus=PGSC0003DMG400040620 ID=PGSC0003DMT400091049.v4.03 annot-version=v4.03
Sequence

ATGAGATATGGTGACTTTGAGAAATTGACACCACTCTACAAATTGGAGCAGCTGAGGACA
TTGCTTCCGACATGTATTGATCTCGATAATTGTTACCCTCTAAGCAAGAGGGTGCAACAT
AACATACTTCCAAGTCTAAGATCCTTGAGGATACTGTCATTGTCTCATTACCAGATTGTT
GAGTTGTCAAATGACTTGTTTATCGAATTAAAGCTCCTCAGATTTTTGGACCTTTCTCAG
ACGGATATAAAAAAGTTGCCAGACTCCATTTGTGTGTTGTATAACTTAGAGACACTTCTC
CTGTTACATTGTAGTATTCTTGAGGATTTACCGCTGCAGATGGAAAAGCTAATCAACTTA
CATCATTTTGACATAAGCAACACTTATCGGTTGAAGATGCCGCTACATCTGAGCAAGTTG
AAAAGCCTCCAAGTGCTAGTGGGAGTCAAGTTTCTTCTAGGTGGTGGTGGTGGTTCGAGA
ATGGAAGATTTGGGTGAAGTACATAACTTGTATGGATCTCTATCAATTCTAGAGTTGCAA
AATGTGGTTGATAGAAGGGAAGATCGGAAGGCAAAGATGAGCATTCTGCCAAGTACCTTG
AAGACAGTACGGATATCTCGTTGCCAGAAATTGAAATTAGAGCAGCCAGTTTGTGATTCT
ATAGATGATATATCACCTGAGTTGCTCCGGAGAGCACGCAAATTGAGGGTACTACATTGC
CCCAACCTTACTAGCTTTTTGATTCCTACTGCCACTGAAAGTCTCCATATTTGGAATTGT
GAGAATCTTGAAATAACTTCGGTGGCATGTTCGGGGACACAGATGGCGTATTTGTGTATT
TTCAACTGTAAGAAGCTGAAGTGGCTGCCAGAACGTATGCAGCAACTCCTTCCATCTCTT
AAAACATTGAATCTGTGGCATTGTCCAGAAATACTGTCATTTCCTGAAGGAGAATTGCCC
TTCAATTTACAAGTACTTGAGATCTGTAATTGCACGAAACTAGTGAACGGTCGAAAGGTG
TGGTGTTTACAGAAACTCCCCTGTCTCAGAGAGTTAGTGATCGCACATGATGGCAGTGAT
GAAGAAATGGAGCATTCGGAGTTGCCTTCCTCTATTCAAAGACTTACCATACGCAATCTG
AAAACATTAAGCAGCCAAGTTTTCGAAAGCCTCACCTCTCTTGAATATCTATATATGGCT
GATTTACCTCAAATTCAGTCAATGCTGGAACAAGGGCGGCTTCCCTCATCTCTTTATGAG
CTACATTTATCTCGCCATCATGTGCTCCGATCACTTCCTGAATCAGCACTGTCCTCCTCC
CTCTCTGAGCTGATCATCGAGGATTGCCTAATTCTCCAATTCCTTCCGGTAAAAGAGATG
CCCTCTTCCCTATCTAAGCTGACCATCAGGGATTGCCCTTATCTCAAATCCCTTCCGGTA
AAAGGGATGCCCCCTTCCCTCTCTGAACTATATGTTCCCGACTTCCCATTGCTCAAACCA
CTACTAGAATTTGACAAGGGGGAATATTGGCCAGAAATCGCTCATATCTCGAACATAGAG
ATCGATTGGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400062724
PEP Infomation

pacid=37465466 transcript=PGSC0003DMT400091049 locus=PGSC0003DMG400040620 ID=PGSC0003DMT400091049.v4.03 annot-version=v4.03
Sequence

MRYGDFEKLTPLYKLEQLRTLLPTCIDLDNCYPLSKRVQHNILPSLRSLRILSLSHYQIV
ELSNDLFIELKLLRFLDLSQTDIKKLPDSICVLYNLETLLLLHCSILEDLPLQMEKLINL
HHFDISNTYRLKMPLHLSKLKSLQVLVGVKFLLGGGGGSRMEDLGEVHNLYGSLSILELQ
NVVDRREDRKAKMSILPSTLKTVRISRCQKLKLEQPVCDSIDDISPELLRRARKLRVLHC
PNLTSFLIPTATESLHIWNCENLEITSVACSGTQMAYLCIFNCKKLKWLPERMQQLLPSL
KTLNLWHCPEILSFPEGELPFNLQVLEICNCTKLVNGRKVWCLQKLPCLRELVIAHDGSD
EEMEHSELPSSIQRLTIRNLKTLSSQVFESLTSLEYLYMADLPQIQSMLEQGRLPSSLYE
LHLSRHHVLRSLPESALSSSLSELIIEDCLILQFLPVKEMPSSLSKLTIRDCPYLKSLPV
KGMPPSLSELYVPDFPLLKPLLEFDKGEYWPEIAHISNIEIDW*

Transcript Sequence

Transcript ID

PGSC0003DMT400091049
Transcript Infomation

pacid=37465466 locus=PGSC0003DMG400040620 ID=PGSC0003DMT400091049.v4.03 annot-version=v4.03
Sequence

ATGAGATATGGTGACTTTGAGAAATTGACACCACTCTACAAATTGGAGCAGCTGAGGACA
TTGCTTCCGACATGTATTGATCTCGATAATTGTTACCCTCTAAGCAAGAGGGTGCAACAT
AACATACTTCCAAGTCTAAGATCCTTGAGGATACTGTCATTGTCTCATTACCAGATTGTT
GAGTTGTCAAATGACTTGTTTATCGAATTAAAGCTCCTCAGATTTTTGGACCTTTCTCAG
ACGGATATAAAAAAGTTGCCAGACTCCATTTGTGTGTTGTATAACTTAGAGACACTTCTC
CTGTTACATTGTAGTATTCTTGAGGATTTACCGCTGCAGATGGAAAAGCTAATCAACTTA
CATCATTTTGACATAAGCAACACTTATCGGTTGAAGATGCCGCTACATCTGAGCAAGTTG
AAAAGCCTCCAAGTGCTAGTGGGAGTCAAGTTTCTTCTAGGTGGTGGTGGTGGTTCGAGA
ATGGAAGATTTGGGTGAAGTACATAACTTGTATGGATCTCTATCAATTCTAGAGTTGCAA
AATGTGGTTGATAGAAGGGAAGATCGGAAGGCAAAGATGAGCATTCTGCCAAGTACCTTG
AAGACAGTACGGATATCTCGTTGCCAGAAATTGAAATTAGAGCAGCCAGTTTGTGATTCT
ATAGATGATATATCACCTGAGTTGCTCCGGAGAGCACGCAAATTGAGGGTACTACATTGC
CCCAACCTTACTAGCTTTTTGATTCCTACTGCCACTGAAAGTCTCCATATTTGGAATTGT
GAGAATCTTGAAATAACTTCGGTGGCATGTTCGGGGACACAGATGGCGTATTTGTGTATT
TTCAACTGTAAGAAGCTGAAGTGGCTGCCAGAACGTATGCAGCAACTCCTTCCATCTCTT
AAAACATTGAATCTGTGGCATTGTCCAGAAATACTGTCATTTCCTGAAGGAGAATTGCCC
TTCAATTTACAAGTACTTGAGATCTGTAATTGCACGAAACTAGTGAACGGTCGAAAGGTG
TGGTGTTTACAGAAACTCCCCTGTCTCAGAGAGTTAGTGATCGCACATGATGGCAGTGAT
GAAGAAATGGAGCATTCGGAGTTGCCTTCCTCTATTCAAAGACTTACCATACGCAATCTG
AAAACATTAAGCAGCCAAGTTTTCGAAAGCCTCACCTCTCTTGAATATCTATATATGGCT
GATTTACCTCAAATTCAGTCAATGCTGGAACAAGGGCGGCTTCCCTCATCTCTTTATGAG
CTACATTTATCTCGCCATCATGTGCTCCGATCACTTCCTGAATCAGCACTGTCCTCCTCC
CTCTCTGAGCTGATCATCGAGGATTGCCTAATTCTCCAATTCCTTCCGGTAAAAGAGATG
CCCTCTTCCCTATCTAAGCTGACCATCAGGGATTGCCCTTATCTCAAATCCCTTCCGGTA
AAAGGGATGCCCCCTTCCCTCTCTGAACTATATGTTCCCGACTTCCCATTGCTCAAACCA
CTACTAGAATTTGACAAGGGGGAATATTGGCCAGAAATCGCTCATATCTCGAACATAGAG
ATCGATTGGTAA