Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400091014
CDS Infomation

pacid=37478729 polypeptide=PGSC0003DMP400062689 locus=PGSC0003DMG400040585 ID=PGSC0003DMT400091014.v4.03 annot-version=v4.03
Sequence

ATGTCGGGTCGTAAAAAAAAGAGTGTTTATGCAGTGGGTTCTAGCTCTTTAGCTGATGAG
ATGAAAAATTCTTTGAAGTTTGAGGAAGATGATGAGTTAAGGCGTAATTCGGGAAAATTT
ACATCGGTATCTTCTCAGAATGTTCATTCAGTCAATTTTGCAATGTCGGGTCGTAAAAAA
AAGAGTGTTTATGCAGTGGGTTCTAGCTCTTTAGCTGATGAGATGAAAAATTCTTTGAAG
TTTGAGGAAGATGATGAGTTAAGGCGTAATTCGGGAAAATTTACATCGGTATCTTCTCAG
AATGTTCATTCAGTCAATTTTGCAATATCGGGTTCTAAAAAAAAGAAGTTTAATGAAGTG
GGTTCTAAAAAAAAGACGGTTAATGAGGGAAAATCTGCATCAGTTGAAGAAGCGATGACT
CCGGCAGAGTTGAATATAAAAGGGTGTGAGTATTATGAAAAGGGTGATTATGAACAAGCC
TTGACTTTTTTTGATAAAGCTATAGCAAGTAGTCCGGACAATGGTCCATTACATTGTAAT
AGAGCTGGCCCGTTGATTGGTCTCATGCGATATTCTGAAGCAATAAAGGAATGCGAAGAA
GCCATTAGATTGGCTCCAACATATTTTCGAGCACACGAGCGTTTAGGAACTTTTCTACTT
TGTTTAGGACAGGTAGAAAATGCAAGGAAGCACTTATGTTTCCAGGGTCATAAACCAGAT
GAAGCCACTTCGCTGAAATTGCAAGAAGTGTCGAAACATATCAAGAAATGCACTAACGCC
CGGAAACTTGAAGATTGGCCGACTATGTTAAAAGAAGCCAAGGCAGCAATTAATTCTGGA
GCTGAGTTGTCTTCTCAGCTATTTGCATGTCAAGCGGAAGCTCATTTGAAACTACACCAA
TTAGACGAGGCTCGAGCGTGCATGCATACAGCTATGTTGTGTGATCCATCTGCCCCAGCA
TACAAGTCAAAACATTTTGGAATTCTTACTGAAGCATACATATACTTTGTCCTATCTCAG
ATTCACACAGCTTTTGGAAGGTTTGATAAAGCGTGTACTGCCATTGAAAGAGCTGCACGA
GTTGATCCTCAAAACGCTGAAGTGATTCGTTTACTCAAAAAGATGAAGCTGGTGGGGAAA
GGTCCTTTCCGTGGCAACGATTTATTTCACGCTGGAAGATATACAGAAGCTTGTAGTGCT
TATGATGAAGAGCTCACGCTTGATTCATCAAATTCAATTCTCTACTGCGATAGAGCAGCT
TGCTGGTCTAAACTTGGAGAGTGGGAAAAATCTCTGGCTGATAGTAACCAGGCTCTCTTT
ATTCAGCCAGATTATACTAAAGCTCTTTCTCGAAGAGCTATCTCAAATTTAAAGCTGGAA
AGATGGGCTGATGCTGTGAGAGATTATAAGAGTCTGCGGCAGGAACATCCAGATGACAGA
GATATTGCTGATTTTTTATCCCATGCTCGAGCTGAATTAAAGAAGTCACGCAGAGAAGGC
AAGATGGAGTTGGTTTCAGATCTTGAGAAGTTCCAGGCTGCAATTGCATCTGGTGTATCT
GTGGTGCTTTTTAAAGAAATATCCAACCTACAATGCAGTGAGATGTCCTCAGTCGTGGAT
GCCTTGAGCACAAAATATTATAGTTCAGTAAGGTTTCTCAAGGTGGACGTGGAACTGAGC
CCAGCAATCGCCGCATCAGTGAACATTACAACAGTACCTAGAGTTACGATTCACAAGAAG
GGCAGCCGTATGTCGCAGTTGACTATCCCACGTACAGATTTGTTGGAGTCCATGATTAAG
AAAGTCATCTTCGCTCCGAACTAG

Peptide Sequence

PEP ID

PGSC0003DMP400062689
PEP Infomation

pacid=37478729 transcript=PGSC0003DMT400091014 locus=PGSC0003DMG400040585 ID=PGSC0003DMT400091014.v4.03 annot-version=v4.03
Sequence

MSGRKKKSVYAVGSSSLADEMKNSLKFEEDDELRRNSGKFTSVSSQNVHSVNFAMSGRKK
KSVYAVGSSSLADEMKNSLKFEEDDELRRNSGKFTSVSSQNVHSVNFAISGSKKKKFNEV
GSKKKTVNEGKSASVEEAMTPAELNIKGCEYYEKGDYEQALTFFDKAIASSPDNGPLHCN
RAGPLIGLMRYSEAIKECEEAIRLAPTYFRAHERLGTFLLCLGQVENARKHLCFQGHKPD
EATSLKLQEVSKHIKKCTNARKLEDWPTMLKEAKAAINSGAELSSQLFACQAEAHLKLHQ
LDEARACMHTAMLCDPSAPAYKSKHFGILTEAYIYFVLSQIHTAFGRFDKACTAIERAAR
VDPQNAEVIRLLKKMKLVGKGPFRGNDLFHAGRYTEACSAYDEELTLDSSNSILYCDRAA
CWSKLGEWEKSLADSNQALFIQPDYTKALSRRAISNLKLERWADAVRDYKSLRQEHPDDR
DIADFLSHARAELKKSRREGKMELVSDLEKFQAAIASGVSVVLFKEISNLQCSEMSSVVD
ALSTKYYSSVRFLKVDVELSPAIAASVNITTVPRVTIHKKGSRMSQLTIPRTDLLESMIK
KVIFAPN*

Transcript Sequence

Transcript ID

PGSC0003DMT400091014
Transcript Infomation

pacid=37478729 locus=PGSC0003DMG400040585 ID=PGSC0003DMT400091014.v4.03 annot-version=v4.03
Sequence

ATGTCGGGTCGTAAAAAAAAGAGTGTTTATGCAGTGGGTTCTAGCTCTTTAGCTGATGAG
ATGAAAAATTCTTTGAAGTTTGAGGAAGATGATGAGTTAAGGCGTAATTCGGGAAAATTT
ACATCGGTATCTTCTCAGAATGTTCATTCAGTCAATTTTGCAATGTCGGGTCGTAAAAAA
AAGAGTGTTTATGCAGTGGGTTCTAGCTCTTTAGCTGATGAGATGAAAAATTCTTTGAAG
TTTGAGGAAGATGATGAGTTAAGGCGTAATTCGGGAAAATTTACATCGGTATCTTCTCAG
AATGTTCATTCAGTCAATTTTGCAATATCGGGTTCTAAAAAAAAGAAGTTTAATGAAGTG
GGTTCTAAAAAAAAGACGGTTAATGAGGGAAAATCTGCATCAGTTGAAGAAGCGATGACT
CCGGCAGAGTTGAATATAAAAGGGTGTGAGTATTATGAAAAGGGTGATTATGAACAAGCC
TTGACTTTTTTTGATAAAGCTATAGCAAGTAGTCCGGACAATGGTCCATTACATTGTAAT
AGAGCTGGCCCGTTGATTGGTCTCATGCGATATTCTGAAGCAATAAAGGAATGCGAAGAA
GCCATTAGATTGGCTCCAACATATTTTCGAGCACACGAGCGTTTAGGAACTTTTCTACTT
TGTTTAGGACAGGTAGAAAATGCAAGGAAGCACTTATGTTTCCAGGGTCATAAACCAGAT
GAAGCCACTTCGCTGAAATTGCAAGAAGTGTCGAAACATATCAAGAAATGCACTAACGCC
CGGAAACTTGAAGATTGGCCGACTATGTTAAAAGAAGCCAAGGCAGCAATTAATTCTGGA
GCTGAGTTGTCTTCTCAGCTATTTGCATGTCAAGCGGAAGCTCATTTGAAACTACACCAA
TTAGACGAGGCTCGAGCGTGCATGCATACAGCTATGTTGTGTGATCCATCTGCCCCAGCA
TACAAGTCAAAACATTTTGGAATTCTTACTGAAGCATACATATACTTTGTCCTATCTCAG
ATTCACACAGCTTTTGGAAGGTTTGATAAAGCGTGTACTGCCATTGAAAGAGCTGCACGA
GTTGATCCTCAAAACGCTGAAGTGATTCGTTTACTCAAAAAGATGAAGCTGGTGGGGAAA
GGTCCTTTCCGTGGCAACGATTTATTTCACGCTGGAAGATATACAGAAGCTTGTAGTGCT
TATGATGAAGAGCTCACGCTTGATTCATCAAATTCAATTCTCTACTGCGATAGAGCAGCT
TGCTGGTCTAAACTTGGAGAGTGGGAAAAATCTCTGGCTGATAGTAACCAGGCTCTCTTT
ATTCAGCCAGATTATACTAAAGCTCTTTCTCGAAGAGCTATCTCAAATTTAAAGCTGGAA
AGATGGGCTGATGCTGTGAGAGATTATAAGAGTCTGCGGCAGGAACATCCAGATGACAGA
GATATTGCTGATTTTTTATCCCATGCTCGAGCTGAATTAAAGAAGTCACGCAGAGAAGGC
AAGATGGAGTTGGTTTCAGATCTTGAGAAGTTCCAGGCTGCAATTGCATCTGGTGTATCT
GTGGTGCTTTTTAAAGAAATATCCAACCTACAATGCAGTGAGATGTCCTCAGTCGTGGAT
GCCTTGAGCACAAAATATTATAGTTCAGTAAGGTTTCTCAAGGTGGACGTGGAACTGAGC
CCAGCAATCGCCGCATCAGTGAACATTACAACAGTACCTAGAGTTACGATTCACAAGAAG
GGCAGCCGTATGTCGCAGTTGACTATCCCACGTACAGATTTGTTGGAGTCCATGATTAAG
AAAGTCATCTTCGCTCCGAACTAG