Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400090746
CDS Infomation

pacid=37429777 polypeptide=PGSC0003DMP400062421 locus=PGSC0003DMG400040317 ID=PGSC0003DMT400090746.v4.03 annot-version=v4.03
Sequence

ATGAGGCCTTCTAAATTCACTACTTTTTCTTTACTATTTTCTCTCCTTTTGCTGACTGCT
GCCTCGGCGCAGAATTGTGGTTCACAGGCCGGAGGCGCACTTTGTGCCTCGGGACTCTGT
TGCAGCAAATTCGGCTGGTGTGGTAACACTAATGACCATTGTGGTTCTGGCAATTGTCAA
AGCCAGTGTCCTGGTGGCGGCCCTGGTCCTGGTCCTGTTACTGGTGGGGACCTTGGAAGC
GTCATCTCAAATTCCATGTTTGATCAGATGCTTAAGCTTCGCAACGAAAATTCTTGTCAA
GGAAAGAATAATGTCTACACTTACAATGCCTTTATCACTGCTGCTAGGTCTTTTCCTGGC
TTTGGTACAACTGGTGATTCCAATACCCGTAAAAGGGAAATTGCTGCTTTCTTTGCCCAA
ACCTCCCAAAACACTACTGTGTCTAATTACGTGTATTTTGACATTAATAAACACAGTGCT
GGGCCATGTACAAGAGCCATCGGAGCGGACCTTTTAAACAATCCAGATTTAGTAGCCACA
GACCCAGTAATCTCATTCAAGACATCTCTCTTATTCTGGATGACCACTCAATCACCAAAA
CCTTCTTGCCACGATGTCATCATTGGAAGATGGAACCCATCCGCCGGTGACCGAGCAGCC
AATCGTCTTCCTGGATTTGGTGTCATCGCAAACATCATCAATGGTGGCTTAGAATGTGGT
CGTGGTAATGACAACATGGTACAAGATCGAATTGGGTTTTACAGGAGGTATTGCGAAATT
CTTGGAGTTAGTCCGGGTGACAATCTTGATTGCGGCAACCAGAGGCCTTTTGGCAGCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400062421
PEP Infomation

pacid=37429777 transcript=PGSC0003DMT400090746 locus=PGSC0003DMG400040317 ID=PGSC0003DMT400090746.v4.03 annot-version=v4.03
Sequence

MRPSKFTTFSLLFSLLLLTAASAQNCGSQAGGALCASGLCCSKFGWCGNTNDHCGSGNCQ
SQCPGGGPGPGPVTGGDLGSVISNSMFDQMLKLRNENSCQGKNNVYTYNAFITAARSFPG
FGTTGDSNTRKREIAAFFAQTSQNTTVSNYVYFDINKHSAGPCTRAIGADLLNNPDLVAT
DPVISFKTSLLFWMTTQSPKPSCHDVIIGRWNPSAGDRAANRLPGFGVIANIINGGLECG
RGNDNMVQDRIGFYRRYCEILGVSPGDNLDCGNQRPFGS*

Transcript Sequence

Transcript ID

PGSC0003DMT400090746
Transcript Infomation

pacid=37429777 locus=PGSC0003DMG400040317 ID=PGSC0003DMT400090746.v4.03 annot-version=v4.03
Sequence

ATGAGGCCTTCTAAATTCACTACTTTTTCTTTACTATTTTCTCTCCTTTTGCTGACTGCT
GCCTCGGCGCAGAATTGTGGTTCACAGGCCGGAGGCGCACTTTGTGCCTCGGGACTCTGT
TGCAGCAAATTCGGCTGGTGTGGTAACACTAATGACCATTGTGGTTCTGGCAATTGTCAA
AGCCAGTGTCCTGGTGGCGGCCCTGGTCCTGGTCCTGTTACTGGTGGGGACCTTGGAAGC
GTCATCTCAAATTCCATGTTTGATCAGATGCTTAAGCTTCGCAACGAAAATTCTTGTCAA
GGAAAGAATAATGTCTACACTTACAATGCCTTTATCACTGCTGCTAGGTCTTTTCCTGGC
TTTGGTACAACTGGTGATTCCAATACCCGTAAAAGGGAAATTGCTGCTTTCTTTGCCCAA
ACCTCCCAAAACACTACTGTGTCTAATTACGTGTATTTTGACATTAATAAACACAGTGCT
GGGCCATGTACAAGAGCCATCGGAGCGGACCTTTTAAACAATCCAGATTTAGTAGCCACA
GACCCAGTAATCTCATTCAAGACATCTCTCTTATTCTGGATGACCACTCAATCACCAAAA
CCTTCTTGCCACGATGTCATCATTGGAAGATGGAACCCATCCGCCGGTGACCGAGCAGCC
AATCGTCTTCCTGGATTTGGTGTCATCGCAAACATCATCAATGGTGGCTTAGAATGTGGT
CGTGGTAATGACAACATGGTACAAGATCGAATTGGGTTTTACAGGAGGTATTGCGAAATT
CTTGGAGTTAGTCCGGGTGACAATCTTGATTGCGGCAACCAGAGGCCTTTTGGCAGCTGA