Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400090623
CDS Infomation

pacid=37480237 polypeptide=PGSC0003DMP400062298 locus=PGSC0003DMG400040194 ID=PGSC0003DMT400090623.v4.03 annot-version=v4.03
Sequence

ATGGGTTCCTCCGGCAACCGTAGCAATAAAGGAAAGACGGCGTCCAAGTCCGGCAGACGT
CGCCGCCGATCTTCCGACGACACTGCATCAGACTCCGATTCAATGTCTCACACCGAGTCC
GAATCCGATTCGGCTCCGCCGAGTAGCAGCCGCCGCCGTTCAAGCAGTAGCAGAAGCAAA
AGTCGAGGTCATAGCAGCAGATCGAGAAATCATGATTATGCAGACGAAGAGAGTAGTGAC
GACGAGCGAAAGAAGAAAAAGAAGAAAATTACTGAAGAAGAAATTGCTTTGTATATGGCT
AAAAAAGCACAGAAGAAGGCAGCGAAAGTAGCGAAGAAGTTGAAAACGCAGAATGTTTCT
GGTTATTCAAACGATTCAAATCCATTTGGAGATTCGAATCTGAACGAAAATTTTGTCTGG
CGGAAAAAAATTGAACGAGATGTTACTCGAGGTGTACCGCTCGATTCCTTCTCGATGAAG
GCAGAGAAGCAGAGGCAGAAAGAAAGAATGGCTGAAATTGAAAAGGTGAAGAAAAGGAGA
GAAGAAAGAGCAATTGAAAAAGCTCAACGAGAAGAAGAATTACAGATGCTAGCTAGAGAA
CGGGCCCGGGCTGAGTTCCAGGATTGGGAGAAGAAGGAAGAAGAGTTTCATTTCGATCAG
AGCAAAGTCCGGACTGAAATTCGTCTTCGTCAAGGTCGTGTTAAGCCTATTGATGTTCTT
ATCAAGCAATTAGAACCTTCTGGAGATTTCGATGTGGAAATAGATGAGCCTTATGTGGTG
TTCAAGGGTTTGGCTATTAAAGAGATGGAAGAACTTCAAGAGGATATAAAATTGCATATT
GATTTGGATAGGGAAACACCACTGCATATACAGTATTGGGAATCCCTTTTGGTGGTTTGT
AACTGGGAATTGGCTGAAGCTAGGAGAAGGGAAGCAATGGACAAAGCACGAGTACGCGGA
GAGGAGTTACCACCTGAATTGCTTGCAGAAGAGAGGGGTTTGCATTCCAGCATTGAAACA
GATGTGAAGTCTTTGTTACAAGGTAAAGGGTATGGTGAATTAGAAGCATTGCAGTCACAA
ATTGAATCACAAATGCGATCTGGTACTGCTAAAGTAGTGGAGTATTGGGAAGCTGTTCTT
AAACGGCTTCAGATTTACAAGGCTAAGGCTTGTTTGAGGGAAATTCAAGCGAAAATGCTG
CGCGAACATCTTGAGCATCTTGAGAAACCAGTGGAGAGCCGTGATGTAGAGGTGGAAGAG
ACATTGAGGACTGATGAGGAAGACACGGATCATGAACAAAATGATGTTCGAGCCATGTCT
CCAGAACCAATCTTGAATGAGGTAGTTAAGGAGAAAGAGGAGGAGGAGGAGGAGGAGGAA
GAAGAAGAAGACGATGAAGAGGCTGGTTCTTATTCGCCTGTGTTAATGCACGGGGATGAT
AAAGAAGAAGCAGTTGATCCTGAAGAGGACAGGGCAATACTCGAGAGGAAACGTATGGCT
GTTTTGGAAGAGAGACGTGCCCAAGATAAGATTTTGCCACCAACTCCTGCGGAAGACAAC
TTTGAGAAGAAGGCTTTTAAAACTATGGGAGCAATGGAGGAAGGGGATGTAGTATTTGGC
TCAAATGATGAAATTAATCTTGATTCACAGGTGTACTGGTGGCATGACAAGTATAGGCCA
AGGAAGCCCAAGTATTTCAACCGTGTTCATACTGGTTATGAATGGAACAAGTATAATCAA
ACTCATTATGATCATGACAACCCACCTCCAAAGATTGTGCAGGGATACAAATTCAATATC
TTCTATCCTGATCTTGTTGACAAAGCTAGAGCTCCAACTTATGTCATAGAGAAAGATGGA
GATAGTGCTGATACTTGCATCATAAAATTCCATGCTGGCCCTCCTTATGAGGATATAGCT
TTCCGAATTGTTAACAGAGAATGGGAGTACTCCCATAAAAAGGGGTTCAAGTGCATATTC
GACCGAGGAATTCTGCATTTGTACTTTAACTTCAAGCGTCACAGATACCGTCGTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400062298
PEP Infomation

pacid=37480237 transcript=PGSC0003DMT400090623 locus=PGSC0003DMG400040194 ID=PGSC0003DMT400090623.v4.03 annot-version=v4.03
Sequence

MGSSGNRSNKGKTASKSGRRRRRSSDDTASDSDSMSHTESESDSAPPSSSRRRSSSSRSK
SRGHSSRSRNHDYADEESSDDERKKKKKKITEEEIALYMAKKAQKKAAKVAKKLKTQNVS
GYSNDSNPFGDSNLNENFVWRKKIERDVTRGVPLDSFSMKAEKQRQKERMAEIEKVKKRR
EERAIEKAQREEELQMLARERARAEFQDWEKKEEEFHFDQSKVRTEIRLRQGRVKPIDVL
IKQLEPSGDFDVEIDEPYVVFKGLAIKEMEELQEDIKLHIDLDRETPLHIQYWESLLVVC
NWELAEARRREAMDKARVRGEELPPELLAEERGLHSSIETDVKSLLQGKGYGELEALQSQ
IESQMRSGTAKVVEYWEAVLKRLQIYKAKACLREIQAKMLREHLEHLEKPVESRDVEVEE
TLRTDEEDTDHEQNDVRAMSPEPILNEVVKEKEEEEEEEEEEEDDEEAGSYSPVLMHGDD
KEEAVDPEEDRAILERKRMAVLEERRAQDKILPPTPAEDNFEKKAFKTMGAMEEGDVVFG
SNDEINLDSQVYWWHDKYRPRKPKYFNRVHTGYEWNKYNQTHYDHDNPPPKIVQGYKFNI
FYPDLVDKARAPTYVIEKDGDSADTCIIKFHAGPPYEDIAFRIVNREWEYSHKKGFKCIF
DRGILHLYFNFKRHRYRR*

Transcript Sequence

Transcript ID

PGSC0003DMT400090623
Transcript Infomation

pacid=37480237 locus=PGSC0003DMG400040194 ID=PGSC0003DMT400090623.v4.03 annot-version=v4.03
Sequence

ATGGGTTCCTCCGGCAACCGTAGCAATAAAGGAAAGACGGCGTCCAAGTCCGGCAGACGT
CGCCGCCGATCTTCCGACGACACTGCATCAGACTCCGATTCAATGTCTCACACCGAGTCC
GAATCCGATTCGGCTCCGCCGAGTAGCAGCCGCCGCCGTTCAAGCAGTAGCAGAAGCAAA
AGTCGAGGTCATAGCAGCAGATCGAGAAATCATGATTATGCAGACGAAGAGAGTAGTGAC
GACGAGCGAAAGAAGAAAAAGAAGAAAATTACTGAAGAAGAAATTGCTTTGTATATGGCT
AAAAAAGCACAGAAGAAGGCAGCGAAAGTAGCGAAGAAGTTGAAAACGCAGAATGTTTCT
GGTTATTCAAACGATTCAAATCCATTTGGAGATTCGAATCTGAACGAAAATTTTGTCTGG
CGGAAAAAAATTGAACGAGATGTTACTCGAGGTGTACCGCTCGATTCCTTCTCGATGAAG
GCAGAGAAGCAGAGGCAGAAAGAAAGAATGGCTGAAATTGAAAAGGTGAAGAAAAGGAGA
GAAGAAAGAGCAATTGAAAAAGCTCAACGAGAAGAAGAATTACAGATGCTAGCTAGAGAA
CGGGCCCGGGCTGAGTTCCAGGATTGGGAGAAGAAGGAAGAAGAGTTTCATTTCGATCAG
AGCAAAGTCCGGACTGAAATTCGTCTTCGTCAAGGTCGTGTTAAGCCTATTGATGTTCTT
ATCAAGCAATTAGAACCTTCTGGAGATTTCGATGTGGAAATAGATGAGCCTTATGTGGTG
TTCAAGGGTTTGGCTATTAAAGAGATGGAAGAACTTCAAGAGGATATAAAATTGCATATT
GATTTGGATAGGGAAACACCACTGCATATACAGTATTGGGAATCCCTTTTGGTGGTTTGT
AACTGGGAATTGGCTGAAGCTAGGAGAAGGGAAGCAATGGACAAAGCACGAGTACGCGGA
GAGGAGTTACCACCTGAATTGCTTGCAGAAGAGAGGGGTTTGCATTCCAGCATTGAAACA
GATGTGAAGTCTTTGTTACAAGGTAAAGGGTATGGTGAATTAGAAGCATTGCAGTCACAA
ATTGAATCACAAATGCGATCTGGTACTGCTAAAGTAGTGGAGTATTGGGAAGCTGTTCTT
AAACGGCTTCAGATTTACAAGGCTAAGGCTTGTTTGAGGGAAATTCAAGCGAAAATGCTG
CGCGAACATCTTGAGCATCTTGAGAAACCAGTGGAGAGCCGTGATGTAGAGGTGGAAGAG
ACATTGAGGACTGATGAGGAAGACACGGATCATGAACAAAATGATGTTCGAGCCATGTCT
CCAGAACCAATCTTGAATGAGGTAGTTAAGGAGAAAGAGGAGGAGGAGGAGGAGGAGGAA
GAAGAAGAAGACGATGAAGAGGCTGGTTCTTATTCGCCTGTGTTAATGCACGGGGATGAT
AAAGAAGAAGCAGTTGATCCTGAAGAGGACAGGGCAATACTCGAGAGGAAACGTATGGCT
GTTTTGGAAGAGAGACGTGCCCAAGATAAGATTTTGCCACCAACTCCTGCGGAAGACAAC
TTTGAGAAGAAGGCTTTTAAAACTATGGGAGCAATGGAGGAAGGGGATGTAGTATTTGGC
TCAAATGATGAAATTAATCTTGATTCACAGGTGTACTGGTGGCATGACAAGTATAGGCCA
AGGAAGCCCAAGTATTTCAACCGTGTTCATACTGGTTATGAATGGAACAAGTATAATCAA
ACTCATTATGATCATGACAACCCACCTCCAAAGATTGTGCAGGGATACAAATTCAATATC
TTCTATCCTGATCTTGTTGACAAAGCTAGAGCTCCAACTTATGTCATAGAGAAAGATGGA
GATAGTGCTGATACTTGCATCATAAAATTCCATGCTGGCCCTCCTTATGAGGATATAGCT
TTCCGAATTGTTAACAGAGAATGGGAGTACTCCCATAAAAAGGGGTTCAAGTGCATATTC
GACCGAGGAATTCTGCATTTGTACTTTAACTTCAAGCGTCACAGATACCGTCGTTGA