Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400090387
CDS Infomation

pacid=37440129 polypeptide=PGSC0003DMP400062062 locus=PGSC0003DMG400039958 ID=PGSC0003DMT400090387.v4.03 annot-version=v4.03
Sequence

ATGGCAAACAAGGTGTTCATTGGTGGAATAGCTTCTGTTCTTGTGGTGGCTTGTGTGGTG
GCAGCCTGTGTCACCCTGACTAAACATGACTCGGATACTTCATCAAATGGAGTTGCAACT
TCAACAAAGTCAGTTGAATCTATGTGTCAACCCACACCATACAAACAAACTTGTGAAAAG
ACCCTCTCCGCGGCAAAGAATGTGTCCGATCCAAAGGACTACATCAAGGTTGCATTCGAA
GCCACTGTGGCAGACATCAAGAATGCCCTCAAGAACACTGAGCCAATTAAGAAAGCTGCC
AGTGATCCTTACACCAAAGACGCTCTCCTTGCTTGTGAAGAGTTGTTTGATCTAGCCGTT
GAGGATCTAAGGGGCTCTGTCGCAAAGATAGAGAACTTTGATTTCTCTAAGATCAAGGAT
ATAGTGGATGACCTCAAGTCATGGCTTAGCGCTGTAGTTGCTTATGAAGAGACTTGTTTA
GATGGTTTTACCAAATCAGAATACAGTGCAACCCGCAACCAAATGGTGAAGCTAATGAAC
ACCACCCGGGAGCTGAGTATCAATGCTCTTTCCATGGTCAACAGCTTCGGTGAAATGATC
ACACAAACCACAGGACTTACCCGCAAATTGTTATCAGACAGTGACTCCTTTGTCGAAGCC
AGTAACCGTAAACTTGTTCAAATTTCTGCCTCCAAGCCTAATGCTGTGGTTTCTGCCAGT
GGAGGCGGACAATACAAAACCATTCAGGAAGCAGTTAACGCTGTCCCCAAGAACAATCCA
ACTCCTTTCGTTATCCTGATCAAGGCCGGTACATACAAGGAACACATTGAAATCGATAAG
AACAAGCCAAATGTTGTGTTTATTGGTGAAGGCCCAACCAAGACCATAATCACCGGTGAC
AGGGGAGTAAAGCATGACGGTTATGCAACATGGCATACATGCGCCCTTGGTGTTGCTGGT
GAAGGTTTCGTTATCAAGGACATCGGTATTGAAAACACAGCAGGACCTGCAAAAGAACAA
GCTGTTGCATTGAGAATTAATGCTGATAAGGCTGTTGTCCACAACTGCAAAATCGATGGA
TATCAAGACACTTTATACGCTCACTCATTCAGACAATTCTATCGTGATTGTACCATTACA
GGCACCGTTGATTTCATCTTTGGTGATGCAAGTGCTGTTTTCCAAAACTGCAAATTGATT
GTGAGGAAACCAGGTAATGCACAAGCTTGCATGATCACTGCTCAAGGAAGGACAGTACCA
ACTTCGTTTGGTGGATTCGTTATCCAGAATTGTGACATCAAGGCTGATCCAGCATTCACT
AGTACCACTCCACCAATCAAAGCCTATCTTGGACGTCCATGGAAGGAGTATTCCAAGACC
ATCATAATGCAATCGAACATCGATGCATTCATCGATCCCACAGGATGGGCACCATGGAAC
TCAACTGATTTTGGACTACACACATGTTTTTATGCAGAGTATCAAAACAGAGGACCAGGT
GCTGCACTTGGCAAAAGAGTCTCAACATGGAGAGGTTACCAAAAGGGAATTTCAGGAGAC
GCTATTAACAAATACACTGCCGGTAAATTCATTAACACACAACAGCCCTGGCTACCAAAG
TTTGATATTCCCTATGACGCAGGCATGATGAAGGTGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400062062
PEP Infomation

pacid=37440129 transcript=PGSC0003DMT400090387 locus=PGSC0003DMG400039958 ID=PGSC0003DMT400090387.v4.03 annot-version=v4.03
Sequence

MANKVFIGGIASVLVVACVVAACVTLTKHDSDTSSNGVATSTKSVESMCQPTPYKQTCEK
TLSAAKNVSDPKDYIKVAFEATVADIKNALKNTEPIKKAASDPYTKDALLACEELFDLAV
EDLRGSVAKIENFDFSKIKDIVDDLKSWLSAVVAYEETCLDGFTKSEYSATRNQMVKLMN
TTRELSINALSMVNSFGEMITQTTGLTRKLLSDSDSFVEASNRKLVQISASKPNAVVSAS
GGGQYKTIQEAVNAVPKNNPTPFVILIKAGTYKEHIEIDKNKPNVVFIGEGPTKTIITGD
RGVKHDGYATWHTCALGVAGEGFVIKDIGIENTAGPAKEQAVALRINADKAVVHNCKIDG
YQDTLYAHSFRQFYRDCTITGTVDFIFGDASAVFQNCKLIVRKPGNAQACMITAQGRTVP
TSFGGFVIQNCDIKADPAFTSTTPPIKAYLGRPWKEYSKTIIMQSNIDAFIDPTGWAPWN
STDFGLHTCFYAEYQNRGPGAALGKRVSTWRGYQKGISGDAINKYTAGKFINTQQPWLPK
FDIPYDAGMMKV*

Transcript Sequence

Transcript ID

PGSC0003DMT400090387
Transcript Infomation

pacid=37440129 locus=PGSC0003DMG400039958 ID=PGSC0003DMT400090387.v4.03 annot-version=v4.03
Sequence

ATGGCAAACAAGGTGTTCATTGGTGGAATAGCTTCTGTTCTTGTGGTGGCTTGTGTGGTG
GCAGCCTGTGTCACCCTGACTAAACATGACTCGGATACTTCATCAAATGGAGTTGCAACT
TCAACAAAGTCAGTTGAATCTATGTGTCAACCCACACCATACAAACAAACTTGTGAAAAG
ACCCTCTCCGCGGCAAAGAATGTGTCCGATCCAAAGGACTACATCAAGGTTGCATTCGAA
GCCACTGTGGCAGACATCAAGAATGCCCTCAAGAACACTGAGCCAATTAAGAAAGCTGCC
AGTGATCCTTACACCAAAGACGCTCTCCTTGCTTGTGAAGAGTTGTTTGATCTAGCCGTT
GAGGATCTAAGGGGCTCTGTCGCAAAGATAGAGAACTTTGATTTCTCTAAGATCAAGGAT
ATAGTGGATGACCTCAAGTCATGGCTTAGCGCTGTAGTTGCTTATGAAGAGACTTGTTTA
GATGGTTTTACCAAATCAGAATACAGTGCAACCCGCAACCAAATGGTGAAGCTAATGAAC
ACCACCCGGGAGCTGAGTATCAATGCTCTTTCCATGGTCAACAGCTTCGGTGAAATGATC
ACACAAACCACAGGACTTACCCGCAAATTGTTATCAGACAGTGACTCCTTTGTCGAAGCC
AGTAACCGTAAACTTGTTCAAATTTCTGCCTCCAAGCCTAATGCTGTGGTTTCTGCCAGT
GGAGGCGGACAATACAAAACCATTCAGGAAGCAGTTAACGCTGTCCCCAAGAACAATCCA
ACTCCTTTCGTTATCCTGATCAAGGCCGGTACATACAAGGAACACATTGAAATCGATAAG
AACAAGCCAAATGTTGTGTTTATTGGTGAAGGCCCAACCAAGACCATAATCACCGGTGAC
AGGGGAGTAAAGCATGACGGTTATGCAACATGGCATACATGCGCCCTTGGTGTTGCTGGT
GAAGGTTTCGTTATCAAGGACATCGGTATTGAAAACACAGCAGGACCTGCAAAAGAACAA
GCTGTTGCATTGAGAATTAATGCTGATAAGGCTGTTGTCCACAACTGCAAAATCGATGGA
TATCAAGACACTTTATACGCTCACTCATTCAGACAATTCTATCGTGATTGTACCATTACA
GGCACCGTTGATTTCATCTTTGGTGATGCAAGTGCTGTTTTCCAAAACTGCAAATTGATT
GTGAGGAAACCAGGTAATGCACAAGCTTGCATGATCACTGCTCAAGGAAGGACAGTACCA
ACTTCGTTTGGTGGATTCGTTATCCAGAATTGTGACATCAAGGCTGATCCAGCATTCACT
AGTACCACTCCACCAATCAAAGCCTATCTTGGACGTCCATGGAAGGAGTATTCCAAGACC
ATCATAATGCAATCGAACATCGATGCATTCATCGATCCCACAGGATGGGCACCATGGAAC
TCAACTGATTTTGGACTACACACATGTTTTTATGCAGAGTATCAAAACAGAGGACCAGGT
GCTGCACTTGGCAAAAGAGTCTCAACATGGAGAGGTTACCAAAAGGGAATTTCAGGAGAC
GCTATTAACAAATACACTGCCGGTAAATTCATTAACACACAACAGCCCTGGCTACCAAAG
TTTGATATTCCCTATGACGCAGGCATGATGAAGGTGTAA