Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400090327
CDS Infomation

pacid=37432662 polypeptide=PGSC0003DMP400062002 locus=PGSC0003DMG400039898 ID=PGSC0003DMT400090327.v4.03 annot-version=v4.03
Sequence

ATGGAAGTGAAAAGTAAGATGAAATATTACACAAGAGAAGAAGATGAGGATGAGATGGCA
CTTCCAGGATTCAGATTTCATCCAACAGATGAAGAGCTAGTAGGGTTTTATCTAAGGAGG
AAAGTTGAGAAAAGGCCTCTTATCAATATTGAACTCATCAAACAGATTGATATCTACAAA
TATGAACCATGGGATCTTCCAAAGTCAAGCAACATGGGAGAAAAGGAATGGTACTTCTTT
TGCAAAAGAGGGAGAAAATATAGAAACAGTGTTAGACCAAATAGGGTGACTGGTTGTGGA
TTTTGGAAGGCTACTGGTATTGATAAACCTATTTATAATTCAACTCATGAATGCATTGGC
TTGAAGAAGTCATTGGTTTATTATCGAGGTAGTGCTGGAAAAGGCACAAAAACTGATTGG
ATGATGCATGAGTTTCGACTTCCTGCTGAAAATGACAAATCTACTAAACACATTGAAGCT
AAAACCATTGCTCAAGAAGCTGAAGTTTGGACTCTATGTAGAATTATTAAGCGAAATAAG
TGTACTGTAGCTGCAGAATGGAGAATAGCAGCAGCAGCAGCAAAGAGAAACCCAGTAGTT
GACTCAGAAACATGCAGTGCGGATTCTTCAGATTATATAATAAGCTTTGGTACTGCTCCA
ACTGATATTGTTCATCAAGACATGATGACATCATCAACAAATAATAGTAATAACCAACAG
CTGCTACGGAGCTCATCATCAATACTGTGTACTACTCAACAACCTTCATCAGACATGAAC
TTCGAGTTGTTGTTAAAGAATAATGTAGATTATTGGGATGAACTTACATCTATTTTAGAC
CTCGATCGTTATTGA

Peptide Sequence

PEP ID

PGSC0003DMP400062002
PEP Infomation

pacid=37432662 transcript=PGSC0003DMT400090327 locus=PGSC0003DMG400039898 ID=PGSC0003DMT400090327.v4.03 annot-version=v4.03
Sequence

MEVKSKMKYYTREEDEDEMALPGFRFHPTDEELVGFYLRRKVEKRPLINIELIKQIDIYK
YEPWDLPKSSNMGEKEWYFFCKRGRKYRNSVRPNRVTGCGFWKATGIDKPIYNSTHECIG
LKKSLVYYRGSAGKGTKTDWMMHEFRLPAENDKSTKHIEAKTIAQEAEVWTLCRIIKRNK
CTVAAEWRIAAAAAKRNPVVDSETCSADSSDYIISFGTAPTDIVHQDMMTSSTNNSNNQQ
LLRSSSSILCTTQQPSSDMNFELLLKNNVDYWDELTSILDLDRY*

Transcript Sequence

Transcript ID

PGSC0003DMT400090327
Transcript Infomation

pacid=37432662 locus=PGSC0003DMG400039898 ID=PGSC0003DMT400090327.v4.03 annot-version=v4.03
Sequence

ATGGAAGTGAAAAGTAAGATGAAATATTACACAAGAGAAGAAGATGAGGATGAGATGGCA
CTTCCAGGATTCAGATTTCATCCAACAGATGAAGAGCTAGTAGGGTTTTATCTAAGGAGG
AAAGTTGAGAAAAGGCCTCTTATCAATATTGAACTCATCAAACAGATTGATATCTACAAA
TATGAACCATGGGATCTTCCAAAGTCAAGCAACATGGGAGAAAAGGAATGGTACTTCTTT
TGCAAAAGAGGGAGAAAATATAGAAACAGTGTTAGACCAAATAGGGTGACTGGTTGTGGA
TTTTGGAAGGCTACTGGTATTGATAAACCTATTTATAATTCAACTCATGAATGCATTGGC
TTGAAGAAGTCATTGGTTTATTATCGAGGTAGTGCTGGAAAAGGCACAAAAACTGATTGG
ATGATGCATGAGTTTCGACTTCCTGCTGAAAATGACAAATCTACTAAACACATTGAAGCT
AAAACCATTGCTCAAGAAGCTGAAGTTTGGACTCTATGTAGAATTATTAAGCGAAATAAG
TGTACTGTAGCTGCAGAATGGAGAATAGCAGCAGCAGCAGCAAAGAGAAACCCAGTAGTT
GACTCAGAAACATGCAGTGCGGATTCTTCAGATTATATAATAAGCTTTGGTACTGCTCCA
ACTGATATTGTTCATCAAGACATGATGACATCATCAACAAATAATAGTAATAACCAACAG
CTGCTACGGAGCTCATCATCAATACTGTGTACTACTCAACAACCTTCATCAGACATGAAC
TTCGAGTTGTTGTTAAAGAATAATGTAGATTATTGGGATGAACTTACATCTATTTTAGAC
CTCGATCGTTATTGA