Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400090285
CDS Infomation

pacid=37427403 polypeptide=PGSC0003DMP400061960 locus=PGSC0003DMG400039856 ID=PGSC0003DMT400090285.v4.03 annot-version=v4.03
Sequence

ATGGGAGCTGGTGCTCCAAATCCTCTGTACAGTGAGTATTCTATCCTAAACAGCTTGAAA
ATGGTGCCACTTTTACTGTTTTATGCATTTTCTGTTTTGGTTCAGGGTTATAATGCTGAA
TTAACCTTGCACCCAAAAACTCAATTTCTCTTCCCTGAAGGAAAATCTTTAGTCTTGCCT
GAACCATCAGATTACTTTTCTAGCCAGCTTGTATCTACTCCTTTGCCCACTAATTCATTT
TTTCAAAATTTTGTACTCAAGAATGGTGATCAGCCTGAGTATATTCAACCTTATCTTATT
CGCTCTGCTAACTCCTCCATTTCTATTTCTTATCCATCTCAGAACATTTCCTCTGATTTC
ATTGAACAGATTTTTCGCCCTGATTTGACTATATCTGCTTCTAAGAATCCTAAGCCAAAT
CAGCGCCATGTAATCTCATCATACAGTGATCTTAGTGTTACTTTGGACTTACCATCGAGT
AACCTTAGATTCTTTCTTGTAAGAGGTAGTCCTTATTTGACTTTTGCTGTCAATGGGAAC
ACTTCAATTTCAATCTCAACGGTTGATCCAATTCTCAAGCTCTCGTGTGATAGTTCTTTT
ACTAAGTACACTATCAGACTCCGGAATCGTCAAACGTGGATCCTATATGCATCTGCTCCG
ATTCATTTGACTGATAATGTATCCACCATTAAGTCTGGTGGGTTCTCGGGTGTTATTCGG
ATTGCTCTCTTGGCTGATTCTGATTCCCAATTTGAGAAAATACTTGATAAGTGTAGCTCC
ACTTATCCTGTTTCGGGAAGTGCCATTTTGGGGTCTTTTGCTCTCAAGTATAAGTGGGAT
GTGAAGGGTGCAGGGAAGTTGCTAATGCTTGCTCACCCTCTCCATCTTCGACTTCTTTCA
AAAGCAGATGCTTCAGTAACTGTGCTGGAGGATGTCAAGTATAGTAGCATGGATGGTGAG
CTTGTTGGTGTAATTGGAGATACATGGGATCTTGAAGCAGAGTCAATCCCAGTATCATGG
CATTCGATTAAAGGTTTGAATAAAAAATCAATCCCTGAAATTATTCGTGCACTAGGTAAC
GATGTTAAGACTTTGAATGCATCAAACATATCTGCTACATCGTCTTACTTTTACGGGAAA
TTGGTTGCTAGAGCAGCAAGATTGGCATTGATTGCAGAAGAGGTTTCTTATCCTAAGATA
ACACCAGTAGTTGTTCAATTCTTGAAGGATATGATAGAGCCTTGGTTAAACGGAACATTT
GGTGCCAATGGCTTCTTCTATGACAAGAAATGGGGTGGACTTGTGACTAAACATGGGTTA
AATGACACAACAGGTGATTTTGGTTTTGGAATTTACAACGATCATCATTTTCATTTGGGA
TACTATATATATGGCATTTCAGTGCTTACAAGATTTGATCCTGCATGGGGAAAGCAGTAC
AAGAGTCAAGCCTATTCTTTAGTGGAAGACTACACGAACTTGGGACCGAAGGAGAACCAG
CATTACACGCGTCTTAGGTGTTTTGACTTATGGAAGCTACATTCTTGGGCTGCAGGGCTG
ACTGAATTTCCATTTGGGAGAAATCAAGAGAGCACAAGTGAAGCAATTAATGCATATTAT
TCAGCAGCATTGATGGGATCCGCATATGGAGATGCTGATCTTGTTTCGGTTGGCTCAACT
CTTGCAGCCTTCGAAATTCAGTCAGCACAGACTTGGTGGCATGTAAAAGGAGACAACGAA
ATATATGCACCAAGATTTGTCAAGAATAATAAGGTTGTTGGTATTTTGTGGTCTAGAAAA
AGAGACAGCATTCTCTGGTTTGCTCCAGCTGAGAGGAAAGACATTAGGCTGGGAATTCAA
GTTCTACCAATATTGCCAATCACTGAGGTTGTGTTTTCTGATGTTGATTATGTGAAGGAG
CTTGTGAAATGGGCACTCACTAGCGTACCCAAAAACAGAACTGAAGAAGGATGGAAAGGA
TTTGTTTATGCCTTGGAAGCAATTTATAAGCAGAAGCAAGCTCTAAACAAAGTGAGGGAA
CTAAGCAGTCATGATGATGGAAATTCACTCTCAAATCTTTTATGGTGGATTCATAGCAGA
AAATGA

Peptide Sequence

PEP ID

PGSC0003DMP400061960
PEP Infomation

pacid=37427403 transcript=PGSC0003DMT400090285 locus=PGSC0003DMG400039856 ID=PGSC0003DMT400090285.v4.03 annot-version=v4.03
Sequence

MGAGAPNPLYSEYSILNSLKMVPLLLFYAFSVLVQGYNAELTLHPKTQFLFPEGKSLVLP
EPSDYFSSQLVSTPLPTNSFFQNFVLKNGDQPEYIQPYLIRSANSSISISYPSQNISSDF
IEQIFRPDLTISASKNPKPNQRHVISSYSDLSVTLDLPSSNLRFFLVRGSPYLTFAVNGN
TSISISTVDPILKLSCDSSFTKYTIRLRNRQTWILYASAPIHLTDNVSTIKSGGFSGVIR
IALLADSDSQFEKILDKCSSTYPVSGSAILGSFALKYKWDVKGAGKLLMLAHPLHLRLLS
KADASVTVLEDVKYSSMDGELVGVIGDTWDLEAESIPVSWHSIKGLNKKSIPEIIRALGN
DVKTLNASNISATSSYFYGKLVARAARLALIAEEVSYPKITPVVVQFLKDMIEPWLNGTF
GANGFFYDKKWGGLVTKHGLNDTTGDFGFGIYNDHHFHLGYYIYGISVLTRFDPAWGKQY
KSQAYSLVEDYTNLGPKENQHYTRLRCFDLWKLHSWAAGLTEFPFGRNQESTSEAINAYY
SAALMGSAYGDADLVSVGSTLAAFEIQSAQTWWHVKGDNEIYAPRFVKNNKVVGILWSRK
RDSILWFAPAERKDIRLGIQVLPILPITEVVFSDVDYVKELVKWALTSVPKNRTEEGWKG
FVYALEAIYKQKQALNKVRELSSHDDGNSLSNLLWWIHSRK*

Transcript Sequence

Transcript ID

PGSC0003DMT400090285
Transcript Infomation

pacid=37427403 locus=PGSC0003DMG400039856 ID=PGSC0003DMT400090285.v4.03 annot-version=v4.03
Sequence

ATGGGAGCTGGTGCTCCAAATCCTCTGTACAGTGAGTATTCTATCCTAAACAGCTTGAAA
ATGGTGCCACTTTTACTGTTTTATGCATTTTCTGTTTTGGTTCAGGGTTATAATGCTGAA
TTAACCTTGCACCCAAAAACTCAATTTCTCTTCCCTGAAGGAAAATCTTTAGTCTTGCCT
GAACCATCAGATTACTTTTCTAGCCAGCTTGTATCTACTCCTTTGCCCACTAATTCATTT
TTTCAAAATTTTGTACTCAAGAATGGTGATCAGCCTGAGTATATTCAACCTTATCTTATT
CGCTCTGCTAACTCCTCCATTTCTATTTCTTATCCATCTCAGAACATTTCCTCTGATTTC
ATTGAACAGATTTTTCGCCCTGATTTGACTATATCTGCTTCTAAGAATCCTAAGCCAAAT
CAGCGCCATGTAATCTCATCATACAGTGATCTTAGTGTTACTTTGGACTTACCATCGAGT
AACCTTAGATTCTTTCTTGTAAGAGGTAGTCCTTATTTGACTTTTGCTGTCAATGGGAAC
ACTTCAATTTCAATCTCAACGGTTGATCCAATTCTCAAGCTCTCGTGTGATAGTTCTTTT
ACTAAGTACACTATCAGACTCCGGAATCGTCAAACGTGGATCCTATATGCATCTGCTCCG
ATTCATTTGACTGATAATGTATCCACCATTAAGTCTGGTGGGTTCTCGGGTGTTATTCGG
ATTGCTCTCTTGGCTGATTCTGATTCCCAATTTGAGAAAATACTTGATAAGTGTAGCTCC
ACTTATCCTGTTTCGGGAAGTGCCATTTTGGGGTCTTTTGCTCTCAAGTATAAGTGGGAT
GTGAAGGGTGCAGGGAAGTTGCTAATGCTTGCTCACCCTCTCCATCTTCGACTTCTTTCA
AAAGCAGATGCTTCAGTAACTGTGCTGGAGGATGTCAAGTATAGTAGCATGGATGGTGAG
CTTGTTGGTGTAATTGGAGATACATGGGATCTTGAAGCAGAGTCAATCCCAGTATCATGG
CATTCGATTAAAGGTTTGAATAAAAAATCAATCCCTGAAATTATTCGTGCACTAGGTAAC
GATGTTAAGACTTTGAATGCATCAAACATATCTGCTACATCGTCTTACTTTTACGGGAAA
TTGGTTGCTAGAGCAGCAAGATTGGCATTGATTGCAGAAGAGGTTTCTTATCCTAAGATA
ACACCAGTAGTTGTTCAATTCTTGAAGGATATGATAGAGCCTTGGTTAAACGGAACATTT
GGTGCCAATGGCTTCTTCTATGACAAGAAATGGGGTGGACTTGTGACTAAACATGGGTTA
AATGACACAACAGGTGATTTTGGTTTTGGAATTTACAACGATCATCATTTTCATTTGGGA
TACTATATATATGGCATTTCAGTGCTTACAAGATTTGATCCTGCATGGGGAAAGCAGTAC
AAGAGTCAAGCCTATTCTTTAGTGGAAGACTACACGAACTTGGGACCGAAGGAGAACCAG
CATTACACGCGTCTTAGGTGTTTTGACTTATGGAAGCTACATTCTTGGGCTGCAGGGCTG
ACTGAATTTCCATTTGGGAGAAATCAAGAGAGCACAAGTGAAGCAATTAATGCATATTAT
TCAGCAGCATTGATGGGATCCGCATATGGAGATGCTGATCTTGTTTCGGTTGGCTCAACT
CTTGCAGCCTTCGAAATTCAGTCAGCACAGACTTGGTGGCATGTAAAAGGAGACAACGAA
ATATATGCACCAAGATTTGTCAAGAATAATAAGGTTGTTGGTATTTTGTGGTCTAGAAAA
AGAGACAGCATTCTCTGGTTTGCTCCAGCTGAGAGGAAAGACATTAGGCTGGGAATTCAA
GTTCTACCAATATTGCCAATCACTGAGGTTGTGTTTTCTGATGTTGATTATGTGAAGGAG
CTTGTGAAATGGGCACTCACTAGCGTACCCAAAAACAGAACTGAAGAAGGATGGAAAGGA
TTTGTTTATGCCTTGGAAGCAATTTATAAGCAGAAGCAAGCTCTAAACAAAGTGAGGGAA
CTAAGCAGTCATGATGATGGAAATTCACTCTCAAATCTTTTATGGTGGATTCATAGCAGA
AAATGA