Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400090249
CDS Infomation

pacid=37475988 polypeptide=PGSC0003DMP400061924 locus=PGSC0003DMG400039820 ID=PGSC0003DMT400090249.v4.03 annot-version=v4.03
Sequence

ATGGCCGATCCACCGCCGGCGGAAGAAGCGAACTTCATCGGGGAATTCGACGGTCTTGCA
GTTCAACCTCTTGACCGTACTTTTTACGCCCTACACATGACCACAACATACCAAGAAAAT
GGCGAAGATTTCCCTATGGAATTTCCAAAAGTTAATTTCACAACCGATGCCATCATTCTT
GATGAATCATTCAATGATAGTTTTCCAAACCCTACCAATGATGATGCATTTCAAAACCCT
AATTGTCTGCCAGATTGTCTCGGGTCGGAGTCGGGTTTGGACTCGAGTCAGATGAACCCG
AATAGCTTTGGTCAACCTAAGAGTCAACTGATGGGGAGTTCTGATGATGCTTCTAGAAAA
TTCAATTCGACCTCAGGATATTGTCTCGGGGAAGCTCCAGTTTCGAACAAACTGGTACAT
TTTCCCCTAAATTTAGGAAATAATTCAGTAAAAGGTGGAGTTGTAGAAAAGAAACTCAAA
TTAGAGGGTGTCAATGCTAATATAAGCAACTGTAGCTATTTGTTGAAAAGGAAAAAGAGT
AGTGAAGACTCAAATGATGTAGGCAAACACCAAAAATCCACTATATTTTCCTTGTATGAC
AATGCTAACAATGATGAGGACGAAAAGAGGATGGCTAGGAAAATTAGGAATAGGGAAAGT
GCTCACTTGTCAAGGAAAAGAAAAAAACATTATGTTGAGGAATTAGAGAATAAATTTAGA
ATACTTCAATCAACAATTCAACATTTGAATACAAATTTATCCTATGCAATGGTGGAAAAT
GTAACTCTAAAGGCACAACTTGGAGGTACTAGTGTACATGCTCAAGTGCCGTCACCCCTC
GGGATTTATCCCTATCCTCCTCCATGGATTTCATATACACCATCTTATATGATGAGCCGA
CAAAGATCTCAAGTGCCATTGGTTCCCATTCCAAAGTTGAAATCACAGGCACTACCACCC
GCGCCAAAAAGTAGCAAGAAAGTGGAGAAACAGAAGAGTGAGGTGAAAACAAAGAAGGTT
GCTAGTGTTAGCTTCCTTGGTGTGTTGTTCTTCATGCTTCTCTTTGGTGGGTTGGTTCCT
TTATTGAAACTTAGATATGGAGGTATTAGGGAACCATCTATGAGTGGAGAGTCTTTTGTG
AGTGGATTTTATGTAAAATATCATGGAAGAGTTTTGACTGTTGACGGGCCTGTGAATGGG
ACTGGTTGTTCTGGGAAATACGGTGGTAAAGATCATAGCTCCCATTGTGGCCGAGGAGGT
CAGGGTGAAAGCAATCAGAAAAATACCAATAAGGCTGCAGATGAGTTTGCTCATGTGGGC
AATGGTAGTGATCCTCTGGCAGCCTCTATGTATGTCCCAAGGAATGATAAACTTGTTGAT
ATTGATGGGAACTTGATAATTCAATCCGTATTGGCAAGTGAGAAAGCCATGGCATTTCAT
GGAAGTGCTGATAAGAAAAATAGAGAGGCTGGCCTCGCAGTTCCTGGTGATTTAGCCCCT
GCTATCCCAGGAATCCATCCTCGCCTTTATCGAAGTCCTGCAATGGGACAAAACATTCTT
GGATCTGAGGAGAAAGAGAATGTAAAGTCAACTATGCAGGAGTGGTACCTTGAAGGTCTT
GCTGGACCTTTGTTGAGTTCAGGCATGTGTACAGAAGTGTTCCAGTTTGATACGTCATCT
TCTGCTAGAGATATATCTATGGAAGAAAGGCAGAATGGCACGCGCCTCCACAGAAATAGA
AGGATCCTCAATGGCCCTCCCATTTCCCTTTCTAGACCCTCTCACAGCTCTGGAGAACAA
ACTGGAACAGATGGAAAGCGGGAGAATTTCAGCAGGAACAAGTCACTTTCTTCCTTGGTA
GTATCTGTTCTGGTTGATGGTGATGGAGATGGCATCATGGGTCCGAAGTCTGTCTCTCGG
ATATTCATTGTTGTGCTTATTGATAGTGTCAAATATGTCACCTATTCTTGCATGCTTCCA
TTTATTGATAGTGTTCATGTAGCAGAAGCATCATAA

Peptide Sequence

PEP ID

PGSC0003DMP400061924
PEP Infomation

pacid=37475988 transcript=PGSC0003DMT400090249 locus=PGSC0003DMG400039820 ID=PGSC0003DMT400090249.v4.03 annot-version=v4.03
Sequence

MADPPPAEEANFIGEFDGLAVQPLDRTFYALHMTTTYQENGEDFPMEFPKVNFTTDAIIL
DESFNDSFPNPTNDDAFQNPNCLPDCLGSESGLDSSQMNPNSFGQPKSQLMGSSDDASRK
FNSTSGYCLGEAPVSNKLVHFPLNLGNNSVKGGVVEKKLKLEGVNANISNCSYLLKRKKS
SEDSNDVGKHQKSTIFSLYDNANNDEDEKRMARKIRNRESAHLSRKRKKHYVEELENKFR
ILQSTIQHLNTNLSYAMVENVTLKAQLGGTSVHAQVPSPLGIYPYPPPWISYTPSYMMSR
QRSQVPLVPIPKLKSQALPPAPKSSKKVEKQKSEVKTKKVASVSFLGVLFFMLLFGGLVP
LLKLRYGGIREPSMSGESFVSGFYVKYHGRVLTVDGPVNGTGCSGKYGGKDHSSHCGRGG
QGESNQKNTNKAADEFAHVGNGSDPLAASMYVPRNDKLVDIDGNLIIQSVLASEKAMAFH
GSADKKNREAGLAVPGDLAPAIPGIHPRLYRSPAMGQNILGSEEKENVKSTMQEWYLEGL
AGPLLSSGMCTEVFQFDTSSSARDISMEERQNGTRLHRNRRILNGPPISLSRPSHSSGEQ
TGTDGKRENFSRNKSLSSLVVSVLVDGDGDGIMGPKSVSRIFIVVLIDSVKYVTYSCMLP
FIDSVHVAEAS*

Transcript Sequence

Transcript ID

PGSC0003DMT400090249
Transcript Infomation

pacid=37475988 locus=PGSC0003DMG400039820 ID=PGSC0003DMT400090249.v4.03 annot-version=v4.03
Sequence

ATGGCCGATCCACCGCCGGCGGAAGAAGCGAACTTCATCGGGGAATTCGACGGTCTTGCA
GTTCAACCTCTTGACCGTACTTTTTACGCCCTACACATGACCACAACATACCAAGAAAAT
GGCGAAGATTTCCCTATGGAATTTCCAAAAGTTAATTTCACAACCGATGCCATCATTCTT
GATGAATCATTCAATGATAGTTTTCCAAACCCTACCAATGATGATGCATTTCAAAACCCT
AATTGTCTGCCAGATTGTCTCGGGTCGGAGTCGGGTTTGGACTCGAGTCAGATGAACCCG
AATAGCTTTGGTCAACCTAAGAGTCAACTGATGGGGAGTTCTGATGATGCTTCTAGAAAA
TTCAATTCGACCTCAGGATATTGTCTCGGGGAAGCTCCAGTTTCGAACAAACTGGTACAT
TTTCCCCTAAATTTAGGAAATAATTCAGTAAAAGGTGGAGTTGTAGAAAAGAAACTCAAA
TTAGAGGGTGTCAATGCTAATATAAGCAACTGTAGCTATTTGTTGAAAAGGAAAAAGAGT
AGTGAAGACTCAAATGATGTAGGCAAACACCAAAAATCCACTATATTTTCCTTGTATGAC
AATGCTAACAATGATGAGGACGAAAAGAGGATGGCTAGGAAAATTAGGAATAGGGAAAGT
GCTCACTTGTCAAGGAAAAGAAAAAAACATTATGTTGAGGAATTAGAGAATAAATTTAGA
ATACTTCAATCAACAATTCAACATTTGAATACAAATTTATCCTATGCAATGGTGGAAAAT
GTAACTCTAAAGGCACAACTTGGAGGTACTAGTGTACATGCTCAAGTGCCGTCACCCCTC
GGGATTTATCCCTATCCTCCTCCATGGATTTCATATACACCATCTTATATGATGAGCCGA
CAAAGATCTCAAGTGCCATTGGTTCCCATTCCAAAGTTGAAATCACAGGCACTACCACCC
GCGCCAAAAAGTAGCAAGAAAGTGGAGAAACAGAAGAGTGAGGTGAAAACAAAGAAGGTT
GCTAGTGTTAGCTTCCTTGGTGTGTTGTTCTTCATGCTTCTCTTTGGTGGGTTGGTTCCT
TTATTGAAACTTAGATATGGAGGTATTAGGGAACCATCTATGAGTGGAGAGTCTTTTGTG
AGTGGATTTTATGTAAAATATCATGGAAGAGTTTTGACTGTTGACGGGCCTGTGAATGGG
ACTGGTTGTTCTGGGAAATACGGTGGTAAAGATCATAGCTCCCATTGTGGCCGAGGAGGT
CAGGGTGAAAGCAATCAGAAAAATACCAATAAGGCTGCAGATGAGTTTGCTCATGTGGGC
AATGGTAGTGATCCTCTGGCAGCCTCTATGTATGTCCCAAGGAATGATAAACTTGTTGAT
ATTGATGGGAACTTGATAATTCAATCCGTATTGGCAAGTGAGAAAGCCATGGCATTTCAT
GGAAGTGCTGATAAGAAAAATAGAGAGGCTGGCCTCGCAGTTCCTGGTGATTTAGCCCCT
GCTATCCCAGGAATCCATCCTCGCCTTTATCGAAGTCCTGCAATGGGACAAAACATTCTT
GGATCTGAGGAGAAAGAGAATGTAAAGTCAACTATGCAGGAGTGGTACCTTGAAGGTCTT
GCTGGACCTTTGTTGAGTTCAGGCATGTGTACAGAAGTGTTCCAGTTTGATACGTCATCT
TCTGCTAGAGATATATCTATGGAAGAAAGGCAGAATGGCACGCGCCTCCACAGAAATAGA
AGGATCCTCAATGGCCCTCCCATTTCCCTTTCTAGACCCTCTCACAGCTCTGGAGAACAA
ACTGGAACAGATGGAAAGCGGGAGAATTTCAGCAGGAACAAGTCACTTTCTTCCTTGGTA
GTATCTGTTCTGGTTGATGGTGATGGAGATGGCATCATGGGTCCGAAGTCTGTCTCTCGG
ATATTCATTGTTGTGCTTATTGATAGTGTCAAATATGTCACCTATTCTTGCATGCTTCCA
TTTATTGATAGTGTTCATGTAGCAGAAGCATCATAA