Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400090181
CDS Infomation

pacid=37462189 polypeptide=PGSC0003DMP400061856 locus=PGSC0003DMG400039752 ID=PGSC0003DMT400090181.v4.03 annot-version=v4.03
Sequence

ATGGCGGCGACTATTGAAGGACAAGATAGGGTTCTTGCAGCAGCTCAACAGATCGTCAAG
AGTCTCAACACCTCTACAAATGTTGATACTGAAGATATGCTTATGATTTTATCTAATTTT
GATAATCGTTTATCTAAGCTCTCTAATATGATGACCACCACCACTTCATCTTCATCAACT
CCTACATCCGCTAGATCAGCTGCTGCTGCTGCTGCCGTAGCCGAAACCGATCATTCTTAT
ACTGATCTTGTGTTTGAAGAGGCTGCGAAGCTTGTGCTTGAATGGGACTCTCCTCCTAAC
GCCGATCCTGATTCCACCTCTGAATATCTCAACGCTGTTGACGAGATTATTAAGAAGACC
GAGGATCTGAATGTTCTGTCGTCCGATATGGACCGAGCTGAGGCTGCTCTTCAGCATGCT
ATGGCTCATTTGGAGGAGGAGTTTCGTCATGTTCTCATTGGAAATACTGTTCCTTTCGAT
GTTGGCCGTCTCCATGAGTCCTCTTTCATTCGCCGTTGTTCTATCTCTTCATCTGCTGTT
GCAATTCCTGATTTTGAAACAGGTACTTTGTCCGAGGATCAGGAGGATGTTAGCAGTGCA
AGGTACAATCACGTCAAAGGGAAGAGCCTTGGAGCGGATGATTTCTCCCTTGATTTGGTA
TATAATGATGCTATAATTGATCTGCGAGAGATTGCTAACCGTATGATTAAATCTGGATAT
GAAAAGGAATGTTGCCAGGTGTACTCTAGTGTTCGCAGAGAGGTGCTTGACGAGTGTTTA
GCAATTCTTGGCATTGAGAAACTGAGCATTGAGGAGGTCCATAGGATTGATTGGCAGTCG
CTGGATGAGAAAATGAAAAAATGGATTTATGCTGTAAAAGTTCTGGTGAGAATTCTTCTA
TCTGCTGAAAAGAGCTTATGTGACCAGGTTTTTGGAGACTCGGAGTTGATTAAAGAAGTG
TGCTTTATGGAAACTGCAAAGGGCTGTGTAATGCAGCTCTTGAATTTTGGAGAAGCTGTG
GCAATAGGGCGAAGGTCGTCGGAGAAGTTATTTAGGATTCTGGATATGTATGATGCCCTG
GCAGATGTTTTGTCTGACATAGAGCTGCTTTTTTGTGATGAAGATGGTGAATTGGTGTGT
GGTGAGTCAAAGGGGGTGTTAGATGGCCTAGGAGAAGCAGCTATTGGGACATTTGTGGAG
TTTGAAAATGCTGTTGAGCGGGAGATTTCAAAGAAACCAACACAAGGCGGTGAAATCCAT
CCATTGACTCGTTATGTTATGAATTATGTTAAATTGCTGGTTGATTATAGTGATACATTG
AATGGACTTTTAGAGAAGTTAGAGAGTTGCATGGAACATGACCCTTCCGCAACTGATAAT
GGTGATAACTTGGAGTTGGAGAATGTTGCACCACTGGCGAGGCGGTTGATGTTACTGATC
AAGTCTTTGGAAGGTAATCTGGAGGGGAAGTCGAGAATGTATGAAGATTGTGGAATGCCG
TATATATTTTTGATGAATAATGTACATTACATCGTTCAGAAAGTGAAAGATTCGGAGCTT
CAAAAACTTTTAGGTGATCAGTGGGTCAGAAAGCGGAGGGGTCAGATTCGACAACATGCT
ACAAGCTATCTTAGAGCTTCATGGAGCAAGGTTTTATCTTGTTTGAAGGACGAAGGACTT
AGCGGAAGCTCAAGCAATGCTTCAAAGGTAGCCCTCAAGGAGAGGTTTAAGAACTTCAAC
GCATGTTTTGAAGAAATTTACAGAATCCAGACTGGTTGGAAGGTCCCAGATCCTCAACTG
CGCGAAGAACTCAGGATTTCTATTTCTGAAAAGGTGCTTCCTGCATATCGCTCATTTCTA
GGAAGATTTGGGAGTCATTTAGAGAGTGGAAGAAATGCTGGGAAGTACATAAAGTATACT
CTAGAGGACTTAGAAGGTTATTTGTTGGATCTATTTGAAGGAACACCTCTTGTTTTGCAC
CATATGAGAAGAAAAGGCACGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400061856
PEP Infomation

pacid=37462189 transcript=PGSC0003DMT400090181 locus=PGSC0003DMG400039752 ID=PGSC0003DMT400090181.v4.03 annot-version=v4.03
Sequence

MAATIEGQDRVLAAAQQIVKSLNTSTNVDTEDMLMILSNFDNRLSKLSNMMTTTTSSSST
PTSARSAAAAAAVAETDHSYTDLVFEEAAKLVLEWDSPPNADPDSTSEYLNAVDEIIKKT
EDLNVLSSDMDRAEAALQHAMAHLEEEFRHVLIGNTVPFDVGRLHESSFIRRCSISSSAV
AIPDFETGTLSEDQEDVSSARYNHVKGKSLGADDFSLDLVYNDAIIDLREIANRMIKSGY
EKECCQVYSSVRREVLDECLAILGIEKLSIEEVHRIDWQSLDEKMKKWIYAVKVLVRILL
SAEKSLCDQVFGDSELIKEVCFMETAKGCVMQLLNFGEAVAIGRRSSEKLFRILDMYDAL
ADVLSDIELLFCDEDGELVCGESKGVLDGLGEAAIGTFVEFENAVEREISKKPTQGGEIH
PLTRYVMNYVKLLVDYSDTLNGLLEKLESCMEHDPSATDNGDNLELENVAPLARRLMLLI
KSLEGNLEGKSRMYEDCGMPYIFLMNNVHYIVQKVKDSELQKLLGDQWVRKRRGQIRQHA
TSYLRASWSKVLSCLKDEGLSGSSSNASKVALKERFKNFNACFEEIYRIQTGWKVPDPQL
REELRISISEKVLPAYRSFLGRFGSHLESGRNAGKYIKYTLEDLEGYLLDLFEGTPLVLH
HMRRKGT*

Transcript Sequence

Transcript ID

PGSC0003DMT400090181
Transcript Infomation

pacid=37462189 locus=PGSC0003DMG400039752 ID=PGSC0003DMT400090181.v4.03 annot-version=v4.03
Sequence

ATGGCGGCGACTATTGAAGGACAAGATAGGGTTCTTGCAGCAGCTCAACAGATCGTCAAG
AGTCTCAACACCTCTACAAATGTTGATACTGAAGATATGCTTATGATTTTATCTAATTTT
GATAATCGTTTATCTAAGCTCTCTAATATGATGACCACCACCACTTCATCTTCATCAACT
CCTACATCCGCTAGATCAGCTGCTGCTGCTGCTGCCGTAGCCGAAACCGATCATTCTTAT
ACTGATCTTGTGTTTGAAGAGGCTGCGAAGCTTGTGCTTGAATGGGACTCTCCTCCTAAC
GCCGATCCTGATTCCACCTCTGAATATCTCAACGCTGTTGACGAGATTATTAAGAAGACC
GAGGATCTGAATGTTCTGTCGTCCGATATGGACCGAGCTGAGGCTGCTCTTCAGCATGCT
ATGGCTCATTTGGAGGAGGAGTTTCGTCATGTTCTCATTGGAAATACTGTTCCTTTCGAT
GTTGGCCGTCTCCATGAGTCCTCTTTCATTCGCCGTTGTTCTATCTCTTCATCTGCTGTT
GCAATTCCTGATTTTGAAACAGGTACTTTGTCCGAGGATCAGGAGGATGTTAGCAGTGCA
AGGTACAATCACGTCAAAGGGAAGAGCCTTGGAGCGGATGATTTCTCCCTTGATTTGGTA
TATAATGATGCTATAATTGATCTGCGAGAGATTGCTAACCGTATGATTAAATCTGGATAT
GAAAAGGAATGTTGCCAGGTGTACTCTAGTGTTCGCAGAGAGGTGCTTGACGAGTGTTTA
GCAATTCTTGGCATTGAGAAACTGAGCATTGAGGAGGTCCATAGGATTGATTGGCAGTCG
CTGGATGAGAAAATGAAAAAATGGATTTATGCTGTAAAAGTTCTGGTGAGAATTCTTCTA
TCTGCTGAAAAGAGCTTATGTGACCAGGTTTTTGGAGACTCGGAGTTGATTAAAGAAGTG
TGCTTTATGGAAACTGCAAAGGGCTGTGTAATGCAGCTCTTGAATTTTGGAGAAGCTGTG
GCAATAGGGCGAAGGTCGTCGGAGAAGTTATTTAGGATTCTGGATATGTATGATGCCCTG
GCAGATGTTTTGTCTGACATAGAGCTGCTTTTTTGTGATGAAGATGGTGAATTGGTGTGT
GGTGAGTCAAAGGGGGTGTTAGATGGCCTAGGAGAAGCAGCTATTGGGACATTTGTGGAG
TTTGAAAATGCTGTTGAGCGGGAGATTTCAAAGAAACCAACACAAGGCGGTGAAATCCAT
CCATTGACTCGTTATGTTATGAATTATGTTAAATTGCTGGTTGATTATAGTGATACATTG
AATGGACTTTTAGAGAAGTTAGAGAGTTGCATGGAACATGACCCTTCCGCAACTGATAAT
GGTGATAACTTGGAGTTGGAGAATGTTGCACCACTGGCGAGGCGGTTGATGTTACTGATC
AAGTCTTTGGAAGGTAATCTGGAGGGGAAGTCGAGAATGTATGAAGATTGTGGAATGCCG
TATATATTTTTGATGAATAATGTACATTACATCGTTCAGAAAGTGAAAGATTCGGAGCTT
CAAAAACTTTTAGGTGATCAGTGGGTCAGAAAGCGGAGGGGTCAGATTCGACAACATGCT
ACAAGCTATCTTAGAGCTTCATGGAGCAAGGTTTTATCTTGTTTGAAGGACGAAGGACTT
AGCGGAAGCTCAAGCAATGCTTCAAAGGTAGCCCTCAAGGAGAGGTTTAAGAACTTCAAC
GCATGTTTTGAAGAAATTTACAGAATCCAGACTGGTTGGAAGGTCCCAGATCCTCAACTG
CGCGAAGAACTCAGGATTTCTATTTCTGAAAAGGTGCTTCCTGCATATCGCTCATTTCTA
GGAAGATTTGGGAGTCATTTAGAGAGTGGAAGAAATGCTGGGAAGTACATAAAGTATACT
CTAGAGGACTTAGAAGGTTATTTGTTGGATCTATTTGAAGGAACACCTCTTGTTTTGCAC
CATATGAGAAGAAAAGGCACGTAA