Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400089784
CDS Infomation

pacid=37475752 polypeptide=PGSC0003DMP400061459 locus=PGSC0003DMG400039355 ID=PGSC0003DMT400089784.v4.03 annot-version=v4.03
Sequence

ATGGATTGTTATTGTCCTTTACCAGAAGATCTTGTGGTTGATATTTTATTGATGTTGTCA
GTGGAACCACTCTTGCATTTCAAATGTGTGTGCAAGCACTGGTATGCTCTCATCAAAAGT
GAGAGTTTCATAGAGAAGCATTTTCATCACAAGAACAACCATACCCGTCTCCTCATTTGC
AACTTGAAATTAGAAGAGGAAGAACACACCCTCGTAAAGTCTTCTGTAGTCTCCTTGCTC
CCTGAAAAAATAGTTCCGGGTGTGACCCCTGAACAAAAAATTCTCCTTCATCTTCCAAGG
ATCGATCATTTCAACTGTGTTGCTGGCCCAGTTAATGGCTTATTCCTACTGCAAGAATTA
TTTTGTGGATACGATGTCCACTTGAGTTTGTGGAATCCTGCCACCAGAGAGTTCCGACCT
CTGCCTCCTGCGCCTTTTGCGACTGAGCACTTCTTATGTGACTATGATCATGAATTCGGA
TTGGGGTTTGACCAGTTGACTCAGGATTATAAGGCTGTTCAGATTCAAGAATCCTTTGAT
GTTCGGGGACAGGGACAGGGCTATTACCTTCATATGTCTGTCTCTGTCTATTCCTCATGC
GATAACTCATGGAAGAAGCTACAATTCCCTTCCAGTTTTACCTCAGGTTTTCCCTATTCC
GTCACATATCTCAACGGGGTTTATTATTGGATTTGTAGCAGCCTCAATAATAATATATGC
AAGATTCAGTCATTTGCCATGGGCAGCGAACAGTTTGGGGAGATGCAAGGCCCAGGTAAA
CACTGGGTGAGGCTTACATTGTGTGGCGAATCGCTTGCAATTTTAGTCAGTGATAAGTGT
ATGACATCCATATATGAAATGAAACAAGAGGGAAGTTGGTCCAAAGTGTTTACTGTTCAA
CCTCGTATAGATACTGCTCATTTGCCTAAAAATATATGGGAGAATGATAAGATTGTTTTT
GAACTGACAGAAACTTCACAGCTGGTGCTATATGACCCTACAAGAAGTCAAGTTACGGAT
CTTGGAATTCAGCTGAGGCTTATTGGCTGTCGTGTTTTCAATTATCAAGAGAGCCTAGCT
CTAATTACAAAAGGAAATGAGTCTCAAGACCAGGATAATACTGATCGAGCAAATGAAGTA
GTACAACTATTAGGTGGACGAATGATGTCAAGAATTGAAAACTGA

Peptide Sequence

PEP ID

PGSC0003DMP400061459
PEP Infomation

pacid=37475752 transcript=PGSC0003DMT400089784 locus=PGSC0003DMG400039355 ID=PGSC0003DMT400089784.v4.03 annot-version=v4.03
Sequence

MDCYCPLPEDLVVDILLMLSVEPLLHFKCVCKHWYALIKSESFIEKHFHHKNNHTRLLIC
NLKLEEEEHTLVKSSVVSLLPEKIVPGVTPEQKILLHLPRIDHFNCVAGPVNGLFLLQEL
FCGYDVHLSLWNPATREFRPLPPAPFATEHFLCDYDHEFGLGFDQLTQDYKAVQIQESFD
VRGQGQGYYLHMSVSVYSSCDNSWKKLQFPSSFTSGFPYSVTYLNGVYYWICSSLNNNIC
KIQSFAMGSEQFGEMQGPGKHWVRLTLCGESLAILVSDKCMTSIYEMKQEGSWSKVFTVQ
PRIDTAHLPKNIWENDKIVFELTETSQLVLYDPTRSQVTDLGIQLRLIGCRVFNYQESLA
LITKGNESQDQDNTDRANEVVQLLGGRMMSRIEN*

Transcript Sequence

Transcript ID

PGSC0003DMT400089784
Transcript Infomation

pacid=37475752 locus=PGSC0003DMG400039355 ID=PGSC0003DMT400089784.v4.03 annot-version=v4.03
Sequence

ATGGATTGTTATTGTCCTTTACCAGAAGATCTTGTGGTTGATATTTTATTGATGTTGTCA
GTGGAACCACTCTTGCATTTCAAATGTGTGTGCAAGCACTGGTATGCTCTCATCAAAAGT
GAGAGTTTCATAGAGAAGCATTTTCATCACAAGAACAACCATACCCGTCTCCTCATTTGC
AACTTGAAATTAGAAGAGGAAGAACACACCCTCGTAAAGTCTTCTGTAGTCTCCTTGCTC
CCTGAAAAAATAGTTCCGGGTGTGACCCCTGAACAAAAAATTCTCCTTCATCTTCCAAGG
ATCGATCATTTCAACTGTGTTGCTGGCCCAGTTAATGGCTTATTCCTACTGCAAGAATTA
TTTTGTGGATACGATGTCCACTTGAGTTTGTGGAATCCTGCCACCAGAGAGTTCCGACCT
CTGCCTCCTGCGCCTTTTGCGACTGAGCACTTCTTATGTGACTATGATCATGAATTCGGA
TTGGGGTTTGACCAGTTGACTCAGGATTATAAGGCTGTTCAGATTCAAGAATCCTTTGAT
GTTCGGGGACAGGGACAGGGCTATTACCTTCATATGTCTGTCTCTGTCTATTCCTCATGC
GATAACTCATGGAAGAAGCTACAATTCCCTTCCAGTTTTACCTCAGGTTTTCCCTATTCC
GTCACATATCTCAACGGGGTTTATTATTGGATTTGTAGCAGCCTCAATAATAATATATGC
AAGATTCAGTCATTTGCCATGGGCAGCGAACAGTTTGGGGAGATGCAAGGCCCAGGTAAA
CACTGGGTGAGGCTTACATTGTGTGGCGAATCGCTTGCAATTTTAGTCAGTGATAAGTGT
ATGACATCCATATATGAAATGAAACAAGAGGGAAGTTGGTCCAAAGTGTTTACTGTTCAA
CCTCGTATAGATACTGCTCATTTGCCTAAAAATATATGGGAGAATGATAAGATTGTTTTT
GAACTGACAGAAACTTCACAGCTGGTGCTATATGACCCTACAAGAAGTCAAGTTACGGAT
CTTGGAATTCAGCTGAGGCTTATTGGCTGTCGTGTTTTCAATTATCAAGAGAGCCTAGCT
CTAATTACAAAAGGAAATGAGTCTCAAGACCAGGATAATACTGATCGAGCAAATGAAGTA
GTACAACTATTAGGTGGACGAATGATGTCAAGAATTGAAAACTGA