Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400089227
CDS Infomation

pacid=37462148 polypeptide=PGSC0003DMP400060902 locus=PGSC0003DMG400038798 ID=PGSC0003DMT400089227.v4.03 annot-version=v4.03
Sequence

ATGAGTAGTGGCAACCGCGGCATGTTCTTTTTCAATTCTATTAGCAATGACATAATTGAA
CTCCCTAATCTACTAGAGGAGCAGGGAAATTCTTGCTCTGCTTGGACATTTTCATGTCCT
CCTGACTCCTCATCATCAGATTGTTTTGTTGTTGGTTTTGAAACCGGTGTTTATGTCCCA
GATGTATATATCATCAAAGTTGGAGATACTGAATGGACGCATCACTACTTCTTTGACGCA
GGAGATTTTGCTACATCGGATTGCAATAATCCGTTATTTTTTAAAAACAATACTATCTAC
TTACTGGGAGATAAAGGTAATTTGGGAACACTATGTATCAAGGGAAACTCAGCAACACAG
AGACCTAATTGGAAATTTTATGGGAGACATTTTCCGAGTTCAAAACAAACATCAATTCGA
AAGGCATACACAGCCGAAGACGTAGATAATGGAGGAATGTTAGTTGTGTTTTTAAGTCGT
GAAGAAGGGGATGTAGAGGTTTGGAGATACAAACTGAAAGGAAAAATGTTGGAGAGGGAA
CAACTAACAAGTTTGGACAATAATAAAACATTGTTTGTGAGCTCTGGAGGATCGTATTTG
AGAACATGTGTTGCACAGGGTCTAGGAAACAAGATATACTTCCCAATGTTTCATGACAAC
AATAAGGGCAAGGGCGTTTTTTATTGTTTGGCCAATCACAAATATTACTCTTTCGATTAC
TCTGCCATCAAAGCTTACTCAAGTTCTAATATTTTTAACTTAGTTCAACCAAGGTCCTGC
ATTTGGATCGAACAAGAGGATGATTAG

Peptide Sequence

PEP ID

PGSC0003DMP400060902
PEP Infomation

pacid=37462148 transcript=PGSC0003DMT400089227 locus=PGSC0003DMG400038798 ID=PGSC0003DMT400089227.v4.03 annot-version=v4.03
Sequence

MSSGNRGMFFFNSISNDIIELPNLLEEQGNSCSAWTFSCPPDSSSSDCFVVGFETGVYVP
DVYIIKVGDTEWTHHYFFDAGDFATSDCNNPLFFKNNTIYLLGDKGNLGTLCIKGNSATQ
RPNWKFYGRHFPSSKQTSIRKAYTAEDVDNGGMLVVFLSREEGDVEVWRYKLKGKMLERE
QLTSLDNNKTLFVSSGGSYLRTCVAQGLGNKIYFPMFHDNNKGKGVFYCLANHKYYSFDY
SAIKAYSSSNIFNLVQPRSCIWIEQEDD*

Transcript Sequence

Transcript ID

PGSC0003DMT400089227
Transcript Infomation

pacid=37462148 locus=PGSC0003DMG400038798 ID=PGSC0003DMT400089227.v4.03 annot-version=v4.03
Sequence

ATGAGTAGTGGCAACCGCGGCATGTTCTTTTTCAATTCTATTAGCAATGACATAATTGAA
CTCCCTAATCTACTAGAGGAGCAGGGAAATTCTTGCTCTGCTTGGACATTTTCATGTCCT
CCTGACTCCTCATCATCAGATTGTTTTGTTGTTGGTTTTGAAACCGGTGTTTATGTCCCA
GATGTATATATCATCAAAGTTGGAGATACTGAATGGACGCATCACTACTTCTTTGACGCA
GGAGATTTTGCTACATCGGATTGCAATAATCCGTTATTTTTTAAAAACAATACTATCTAC
TTACTGGGAGATAAAGGTAATTTGGGAACACTATGTATCAAGGGAAACTCAGCAACACAG
AGACCTAATTGGAAATTTTATGGGAGACATTTTCCGAGTTCAAAACAAACATCAATTCGA
AAGGCATACACAGCCGAAGACGTAGATAATGGAGGAATGTTAGTTGTGTTTTTAAGTCGT
GAAGAAGGGGATGTAGAGGTTTGGAGATACAAACTGAAAGGAAAAATGTTGGAGAGGGAA
CAACTAACAAGTTTGGACAATAATAAAACATTGTTTGTGAGCTCTGGAGGATCGTATTTG
AGAACATGTGTTGCACAGGGTCTAGGAAACAAGATATACTTCCCAATGTTTCATGACAAC
AATAAGGGCAAGGGCGTTTTTTATTGTTTGGCCAATCACAAATATTACTCTTTCGATTAC
TCTGCCATCAAAGCTTACTCAAGTTCTAATATTTTTAACTTAGTTCAACCAAGGTCCTGC
ATTTGGATCGAACAAGAGGATGATTAG