Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400088909
CDS Infomation

pacid=37464003 polypeptide=PGSC0003DMP400060584 locus=PGSC0003DMG400038480 ID=PGSC0003DMT400088909.v4.03 annot-version=v4.03
Sequence

ATGGATGAACAATCAACAAGAAGAACTAAAAGAGCTTCAAAACGCCATCGTTTACGCTCG
AAAAAAGAGCTTCAAAACGCCATCGTTTATGCTCGAAAAAACGAGCTAAACGATGACGAA
TTGAATGAGTTGCTAAGGAAAATGGTGAACAACTTCCAAGAATACGCGAACGGCCGTAGT
CGACTCGCGAGAGTCGACGTATCGCCGTTCTTCGCCCCCACTTGGTGCACCCCTTTGGAA
AATTCGGTCTTGTGGATAGGCGGGTGTAGGCCGTCTTCGTTTATACGGCTGATTTATGCG
CTAAGTGGAATCGAAATCGAGTCTCATATCGCAGAATATCTACAGGGTATGAAAATTGGA
GACTTTGGTCAGCTTTCTGGTAAGCAAATTGCCATGATTGATAAGTTACAAAGACAAATT
ATTTTAGAAGAGAGAAAACTTTGTTCAAGGTTAGCTAGTTTGCAAGAAGATGTTGTTGAT
CAACCGTTTGCCATGGCGGCCAGAATTTACGATGCTGAAAGAGGTGAGAATGAAATCGAG
CCCTTAAATAAACATGGTGAGGACATGTCAAATTTACTAGAAGAAGTTGATGAGTTGAGG
ATGAAGACACTAAAGGAGATATTGGGCATATTGACACCAATTCAAGGTGTGGAATACTTA
GCAGCAGCAAAGAGAATAAGGCTATGTTTGCAACAATGGGGAAAGAAGAGGGAACACGAA
CATAATAGTAATTAA

Peptide Sequence

PEP ID

PGSC0003DMP400060584
PEP Infomation

pacid=37464003 transcript=PGSC0003DMT400088909 locus=PGSC0003DMG400038480 ID=PGSC0003DMT400088909.v4.03 annot-version=v4.03
Sequence

MDEQSTRRTKRASKRHRLRSKKELQNAIVYARKNELNDDELNELLRKMVNNFQEYANGRS
RLARVDVSPFFAPTWCTPLENSVLWIGGCRPSSFIRLIYALSGIEIESHIAEYLQGMKIG
DFGQLSGKQIAMIDKLQRQIILEERKLCSRLASLQEDVVDQPFAMAARIYDAERGENEIE
PLNKHGEDMSNLLEEVDELRMKTLKEILGILTPIQGVEYLAAAKRIRLCLQQWGKKREHE
HNSN*

Transcript Sequence

Transcript ID

PGSC0003DMT400088909
Transcript Infomation

pacid=37464003 locus=PGSC0003DMG400038480 ID=PGSC0003DMT400088909.v4.03 annot-version=v4.03
Sequence

ATGGATGAACAATCAACAAGAAGAACTAAAAGAGCTTCAAAACGCCATCGTTTACGCTCG
AAAAAAGAGCTTCAAAACGCCATCGTTTATGCTCGAAAAAACGAGCTAAACGATGACGAA
TTGAATGAGTTGCTAAGGAAAATGGTGAACAACTTCCAAGAATACGCGAACGGCCGTAGT
CGACTCGCGAGAGTCGACGTATCGCCGTTCTTCGCCCCCACTTGGTGCACCCCTTTGGAA
AATTCGGTCTTGTGGATAGGCGGGTGTAGGCCGTCTTCGTTTATACGGCTGATTTATGCG
CTAAGTGGAATCGAAATCGAGTCTCATATCGCAGAATATCTACAGGGTATGAAAATTGGA
GACTTTGGTCAGCTTTCTGGTAAGCAAATTGCCATGATTGATAAGTTACAAAGACAAATT
ATTTTAGAAGAGAGAAAACTTTGTTCAAGGTTAGCTAGTTTGCAAGAAGATGTTGTTGAT
CAACCGTTTGCCATGGCGGCCAGAATTTACGATGCTGAAAGAGGTGAGAATGAAATCGAG
CCCTTAAATAAACATGGTGAGGACATGTCAAATTTACTAGAAGAAGTTGATGAGTTGAGG
ATGAAGACACTAAAGGAGATATTGGGCATATTGACACCAATTCAAGGTGTGGAATACTTA
GCAGCAGCAAAGAGAATAAGGCTATGTTTGCAACAATGGGGAAAGAAGAGGGAACACGAA
CATAATAGTAATTAA