Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400088882
CDS Infomation

pacid=37457511 polypeptide=PGSC0003DMP400060557 locus=PGSC0003DMG400038453 ID=PGSC0003DMT400088882.v4.03 annot-version=v4.03
Sequence

ATGGAAATAAAGAACAAGTATGTAACAATAAAAACCAACATAAATGCTGCACCAAAAGAG
CCACACTTTGAGATAAAAGTCGAAAACGTCTCGCTTATCGTTGAGACCGAGTCTGAGTCT
AAGGATGTTGTTGTCAAGAACCTGTTTGTGTCAATCGATCCGTATCAGATAAATCGAATG
AAGAGCCAAAGTTCATCACAAGGAGCCATAAGTTTTGCAACTGCCATTAGTCCTGGTGAC
TCCATTGACAGTTATGGTGTAGGAAGAGTTTTGTTCTCTCATCGACCTGATATCAAGAAA
GGTGATTTGGTAGCAGGGCTACTTACCTGGGGAGAGTATAGTATAGTAAAGGAAGGTTCG
TTGTTGAATAAGTTGGATCCTAACATGGGCTTTCCGTTGTCTTACCATGTCGGAGTTTTA
GGATTCAGTGGACTAACTGCCTATGGTGGATTCTTCGAAGTGTGTAAACCGAAGCCAGGG
GAGAAAGTTTTCGTGTCTGCTGGTTCAGGTTCGATAGGGCATTTAGTAGGACAGTATGCT
AAATTACTTGGATGTTATGTTGTTGGCTCTGCTGGTAGTCAAGAAAAGGTAAATTTTCTT
AAGGAGAGGCTTGGATTCGACGATGCATTCAATTATAAACAAGAAACTGACCTTAAATCA
GCTCTGAAAAGGTGTTTCCCTCAAGGGATTGATGTCTACTTCGACAACGTGGGAGGCAGG
ATGTTAGAAGCAGCAGTAGCAAACATGAACTCATTCGGCAGGGTAGCTGTCTGTGGGGTT
ATTTCTGAGTACACGAATGCTACAACACGAGCTGCTCCAGAGATGTTGGATATAATCTAC
AAAAGGATTACCATCAAAGGATTCCTAGCAGCTGATCTCATGAATGTGTATGCTGAGTTC
CTGTCGAAAACAGTTGAGTACCTCAAAAGTGGAAAACTCAAGACCATTGAAGATGTCTCA
CGAGGCGTTGAAAGCATTCCCTCTGCTTTCATTGGACTGTTCAATGGCGAAAATATAGGC
AAAAAGATTGTCAAAGTTGCAGATGAGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400060557
PEP Infomation

pacid=37457511 transcript=PGSC0003DMT400088882 locus=PGSC0003DMG400038453 ID=PGSC0003DMT400088882.v4.03 annot-version=v4.03
Sequence

MEIKNKYVTIKTNINAAPKEPHFEIKVENVSLIVETESESKDVVVKNLFVSIDPYQINRM
KSQSSSQGAISFATAISPGDSIDSYGVGRVLFSHRPDIKKGDLVAGLLTWGEYSIVKEGS
LLNKLDPNMGFPLSYHVGVLGFSGLTAYGGFFEVCKPKPGEKVFVSAGSGSIGHLVGQYA
KLLGCYVVGSAGSQEKVNFLKERLGFDDAFNYKQETDLKSALKRCFPQGIDVYFDNVGGR
MLEAAVANMNSFGRVAVCGVISEYTNATTRAAPEMLDIIYKRITIKGFLAADLMNVYAEF
LSKTVEYLKSGKLKTIEDVSRGVESIPSAFIGLFNGENIGKKIVKVADE*

Transcript Sequence

Transcript ID

PGSC0003DMT400088882
Transcript Infomation

pacid=37457511 locus=PGSC0003DMG400038453 ID=PGSC0003DMT400088882.v4.03 annot-version=v4.03
Sequence

ATGGAAATAAAGAACAAGTATGTAACAATAAAAACCAACATAAATGCTGCACCAAAAGAG
CCACACTTTGAGATAAAAGTCGAAAACGTCTCGCTTATCGTTGAGACCGAGTCTGAGTCT
AAGGATGTTGTTGTCAAGAACCTGTTTGTGTCAATCGATCCGTATCAGATAAATCGAATG
AAGAGCCAAAGTTCATCACAAGGAGCCATAAGTTTTGCAACTGCCATTAGTCCTGGTGAC
TCCATTGACAGTTATGGTGTAGGAAGAGTTTTGTTCTCTCATCGACCTGATATCAAGAAA
GGTGATTTGGTAGCAGGGCTACTTACCTGGGGAGAGTATAGTATAGTAAAGGAAGGTTCG
TTGTTGAATAAGTTGGATCCTAACATGGGCTTTCCGTTGTCTTACCATGTCGGAGTTTTA
GGATTCAGTGGACTAACTGCCTATGGTGGATTCTTCGAAGTGTGTAAACCGAAGCCAGGG
GAGAAAGTTTTCGTGTCTGCTGGTTCAGGTTCGATAGGGCATTTAGTAGGACAGTATGCT
AAATTACTTGGATGTTATGTTGTTGGCTCTGCTGGTAGTCAAGAAAAGGTAAATTTTCTT
AAGGAGAGGCTTGGATTCGACGATGCATTCAATTATAAACAAGAAACTGACCTTAAATCA
GCTCTGAAAAGGTGTTTCCCTCAAGGGATTGATGTCTACTTCGACAACGTGGGAGGCAGG
ATGTTAGAAGCAGCAGTAGCAAACATGAACTCATTCGGCAGGGTAGCTGTCTGTGGGGTT
ATTTCTGAGTACACGAATGCTACAACACGAGCTGCTCCAGAGATGTTGGATATAATCTAC
AAAAGGATTACCATCAAAGGATTCCTAGCAGCTGATCTCATGAATGTGTATGCTGAGTTC
CTGTCGAAAACAGTTGAGTACCTCAAAAGTGGAAAACTCAAGACCATTGAAGATGTCTCA
CGAGGCGTTGAAAGCATTCCCTCTGCTTTCATTGGACTGTTCAATGGCGAAAATATAGGC
AAAAAGATTGTCAAAGTTGCAGATGAGTGA