Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400088862
CDS Infomation

pacid=37438730 polypeptide=PGSC0003DMP400060537 locus=PGSC0003DMG400038433 ID=PGSC0003DMT400088862.v4.03 annot-version=v4.03
Sequence

ATGGCGGAAATAGTACATGATTTTTTCCCATTGATGAGAGTTTACAAAGATGGTCGAATC
GAGAGGCTGGCGGGCGAAGTTTTTGTCCCACCTGAATCTGATCCTGAAACCGGAGTACAA
ATCAAAGACGTTGAAATTGATCCACAAATTAACCTATCAGCAAGACTTTACCTGCCCAAA
AATGTCGACCCGGTTCAGAAAATTCCTCTTTTCGTCTACTTTCACGGCGGCGGCTTTGTA
ATCGAATCTGCTTTTTCACCTACCTATCACAAATATCTTAGCCTGGTAGCAGCTGAAGCA
AAAGTCGCCATCGTCTCTGTTAACTACAGGTTAGCTCCTGAGTACCCGTTACCAATAGCT
CATGAAGATTCATGGCTAGCTCTCAAATGGGTCACTTCACATGCCAATGGTGATGGTCGT
GAACCATGGCTGAAAGACAATGCCGATTTCAATCTTGTCTATTTGGGCGGAGATAGCGCG
GGTGGTAACATCGCACACCATATAGCAATTCGGTTCGGGTTGGAAAAGTTGGAGGGTGTG
AAAATTGATGGGATTTTCCTTGCCTGTCCATTTTTCTGGGGGAAGGATCCTATTGACGGT
GAGGGAGAAAACTTGCTTGCCAAGGATTTCGTTGAGGATCTAGTGTTGAGTGGGAATCCG
AATAGCACCGGGTTAGATAAGGATCCGATTGACGGTGAGGGAGAAAACTTAGGTGCCAAG
GATCTCTTTGAGAAGCTATGGTTGTTTGTGAATCCCAATAGCTCGGGATTAGATGACCCG
TTGATTAACCCGGAAAAGGATCCGAAATTGTCTGGCTTAGGGTGTGAGAAAGTACTTATG
TACGTCGCCGGAAAAGATCCGTTGAGATTCAGGGGATTGTACTATAAGGAGGCGTTGGAG
AAGAGCGGGTGGCTGGGAACGGTGGAGGTTGTGGAGGTTAAAGATAAGGCACATGTGTTT
CACCTGTTTGTTCCAGAAGCTGAAGAAGCCATGGCCATGCTGAAAAAATTGGCCTCTTTC
CTTAATCAGTCTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400060537
PEP Infomation

pacid=37438730 transcript=PGSC0003DMT400088862 locus=PGSC0003DMG400038433 ID=PGSC0003DMT400088862.v4.03 annot-version=v4.03
Sequence

MAEIVHDFFPLMRVYKDGRIERLAGEVFVPPESDPETGVQIKDVEIDPQINLSARLYLPK
NVDPVQKIPLFVYFHGGGFVIESAFSPTYHKYLSLVAAEAKVAIVSVNYRLAPEYPLPIA
HEDSWLALKWVTSHANGDGREPWLKDNADFNLVYLGGDSAGGNIAHHIAIRFGLEKLEGV
KIDGIFLACPFFWGKDPIDGEGENLLAKDFVEDLVLSGNPNSTGLDKDPIDGEGENLGAK
DLFEKLWLFVNPNSSGLDDPLINPEKDPKLSGLGCEKVLMYVAGKDPLRFRGLYYKEALE
KSGWLGTVEVVEVKDKAHVFHLFVPEAEEAMAMLKKLASFLNQS*

Transcript Sequence

Transcript ID

PGSC0003DMT400088862
Transcript Infomation

pacid=37438730 locus=PGSC0003DMG400038433 ID=PGSC0003DMT400088862.v4.03 annot-version=v4.03
Sequence

ATGGCGGAAATAGTACATGATTTTTTCCCATTGATGAGAGTTTACAAAGATGGTCGAATC
GAGAGGCTGGCGGGCGAAGTTTTTGTCCCACCTGAATCTGATCCTGAAACCGGAGTACAA
ATCAAAGACGTTGAAATTGATCCACAAATTAACCTATCAGCAAGACTTTACCTGCCCAAA
AATGTCGACCCGGTTCAGAAAATTCCTCTTTTCGTCTACTTTCACGGCGGCGGCTTTGTA
ATCGAATCTGCTTTTTCACCTACCTATCACAAATATCTTAGCCTGGTAGCAGCTGAAGCA
AAAGTCGCCATCGTCTCTGTTAACTACAGGTTAGCTCCTGAGTACCCGTTACCAATAGCT
CATGAAGATTCATGGCTAGCTCTCAAATGGGTCACTTCACATGCCAATGGTGATGGTCGT
GAACCATGGCTGAAAGACAATGCCGATTTCAATCTTGTCTATTTGGGCGGAGATAGCGCG
GGTGGTAACATCGCACACCATATAGCAATTCGGTTCGGGTTGGAAAAGTTGGAGGGTGTG
AAAATTGATGGGATTTTCCTTGCCTGTCCATTTTTCTGGGGGAAGGATCCTATTGACGGT
GAGGGAGAAAACTTGCTTGCCAAGGATTTCGTTGAGGATCTAGTGTTGAGTGGGAATCCG
AATAGCACCGGGTTAGATAAGGATCCGATTGACGGTGAGGGAGAAAACTTAGGTGCCAAG
GATCTCTTTGAGAAGCTATGGTTGTTTGTGAATCCCAATAGCTCGGGATTAGATGACCCG
TTGATTAACCCGGAAAAGGATCCGAAATTGTCTGGCTTAGGGTGTGAGAAAGTACTTATG
TACGTCGCCGGAAAAGATCCGTTGAGATTCAGGGGATTGTACTATAAGGAGGCGTTGGAG
AAGAGCGGGTGGCTGGGAACGGTGGAGGTTGTGGAGGTTAAAGATAAGGCACATGTGTTT
CACCTGTTTGTTCCAGAAGCTGAAGAAGCCATGGCCATGCTGAAAAAATTGGCCTCTTTC
CTTAATCAGTCTTAG