Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400088761
CDS Infomation

pacid=37436268 polypeptide=PGSC0003DMP400060436 locus=PGSC0003DMG400038332 ID=PGSC0003DMT400088761.v4.03 annot-version=v4.03
Sequence

ATGGAGTTACTTCATCTTCTCCTCTTTTCATGGGCCCTTTCTGCTCATCTCTTTTTAGCT
ATAGCACAAAGATCCACTTACATTGTCCATTTTGACAAATCTTTAATGCCTAATGTCTTT
ACTGATCACCATCATTGGCATTCTTCCACTATTGATTCCATCAAAGCTTCTGTTCCTTCA
TCAGTAGACAGATTCCACTCTGCTCCAAAACTTGTTTACTCTTATGACAATGTGTTACAT
GGATTTAGTGCTGTTTTGTCCAAAGATGAACTGGCAGCTTTGAAGAAGTTACCAGGTTTC
ATTTCAGCTTACAAGGATAGAACTGTAGAACCTCATACTACCCACACATCTGATTTCCTC
AAGCTCAATCCATCATCTGGGCTATGGCCAGCTTCTGGTTTAGGCCAAGATGTGATTGTT
GCTGTTTTGGATTCTGGCATCTGGCCAGAATCTGCGAGTTTTCAAGATGATGGTATGCCT
GAAATCCCGAAAAGGTGGAAAGGAATTTGCAAGCCAGGCACGCAGTTTAACGCTTCAATG
TGCAACAGAAAACTCATTGGGGCTAATTACTTCAATAAGGGTATTTTGGCTAATGATCCC
ACTGTGAACATTTCCATGAATTCTGCCAGGGATACTGATGGTCATGGCACACATTGTGCT
TCCATTGCTGCTGGGAACTTTGCGAAAGGTGTTTCCCATTTTGGATATGCACCAGGAACA
GCTAGAGGGATTGCTCCACGAGCCAGGCTAGCTGTATACAAGTTTAGCTTTAATGAAGGA
ACCTTTACTTCAGATTTAATTGCAGCTATGGACCAAGCTGTTGCGGATGGTGTTGACATG
ATATCCATTTCTTATGGGTACCGTTTCATTCCCTTGTATGAAGATGCTATATCTATTGCT
TCTTTTGGAGCTATGATGAAGGGAGTTCTGGTTTCAGCTTCAGCTGGAAATCGAGGTCCA
GGGATTGGAAGTTTAAACAATGGATCTCCATGGATCTTGTGTGTGGCATCAGGCCTCACT
GACCGGACATTTGCAGGAACTTTGACTTTGGGCAATGGCTTAAAAATTAGGGGGTGGAGC
TTGTTTCCTGCACGAGCCTTTGTCAGGGATTCTCCGGTGATTTACAACAAGACTCTTTCT
GATTGCAGTTCGGAGGAATTGCTATCACAAGTTGAAAATCGTGAAAGCACCATCGTTATA
TGTGATGATAATGGGGATTTCTCTGATCAAATGCGTATTGTCACTCGAGCAAGACTTGGA
GCAGCCATCTTTATTTCTGAGGATCCAGGAGTGTTCAGATCTGCTACATTTCCCAACCCT
GGAGTTGTAATTAACAAAAAGGAAGGGAAACAAGTCATCAATTATGTGAAAAATAGCGTC
ACTCCCACAGCCACCATCACATTCCAAGAGACGTATCTAGATGCAAAGCCAGCACCTATA
GTTGCTGCATCCTCTGCACGAGGCCCCTCCAGAAGTTACTTGGGAATTTCAAAGCCAGAC
ATATTGGCACCAGGGGTGCTGATTCTTGCAGCATATCCACCAAACATATTTGCTACAAGT
ATTGGGACAAACATACAATTGTCCACTGATTACATTCTTGAATCAGGCACATCGATGGCT
GCACCACATGCTGCTGGAATTGCAGCAATGCTAAAAGCCGCGCATCCTGAGTGGAGTCCT
TCAGCTATTCGCTCTGCCATGATGACAACAGCTGATCCTTTAGACAACACTCGAAAACCT
ATTAAAGACTCTGACATTAATAAAGCCGCCACGCCCCTAGACATGGGAGCAGGGCATGTT
GATCCCAACAGAGCTCTTGATCCTGGCCTAGTATATGATGCAACTCCACAAGATTACGTA
AATCTCCTATGCTCTCTGAATTTCACAGAAGAGCAATTCAAGACAATTGCAAGATCATCA
GCCAACCACAACTGCTCAAATCCATCAGCTGATCTGAATTACCCATCATTCATTGCCTTG
TACAGCATTGAGGGAAACTTCACTTTGTTGGAGCAGAAATTCAAGAGGACAGTTACAAAT
GTTGGTAAAGGTGCAGCTACATATAAAGCAAAGCTAAAAGCTCCCAAGAACTCTACAATT
TCAGTGTCACCACAAACATTGGTGTTCAAGAACAAAAATGAGAAGCAAAGTTATACTTTG
ACAATTCGCTATATAGGTGATGAGGGTCAAAGTAGAAACGTTGGTTCGATCACTTGGGTT
GAACAGAATGGTAACCACTCTGTTAGAAGTCCGATAGTAACATCTCCCATTATTGAGGTC
TGGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400060436
PEP Infomation

pacid=37436268 transcript=PGSC0003DMT400088761 locus=PGSC0003DMG400038332 ID=PGSC0003DMT400088761.v4.03 annot-version=v4.03
Sequence

MELLHLLLFSWALSAHLFLAIAQRSTYIVHFDKSLMPNVFTDHHHWHSSTIDSIKASVPS
SVDRFHSAPKLVYSYDNVLHGFSAVLSKDELAALKKLPGFISAYKDRTVEPHTTHTSDFL
KLNPSSGLWPASGLGQDVIVAVLDSGIWPESASFQDDGMPEIPKRWKGICKPGTQFNASM
CNRKLIGANYFNKGILANDPTVNISMNSARDTDGHGTHCASIAAGNFAKGVSHFGYAPGT
ARGIAPRARLAVYKFSFNEGTFTSDLIAAMDQAVADGVDMISISYGYRFIPLYEDAISIA
SFGAMMKGVLVSASAGNRGPGIGSLNNGSPWILCVASGLTDRTFAGTLTLGNGLKIRGWS
LFPARAFVRDSPVIYNKTLSDCSSEELLSQVENRESTIVICDDNGDFSDQMRIVTRARLG
AAIFISEDPGVFRSATFPNPGVVINKKEGKQVINYVKNSVTPTATITFQETYLDAKPAPI
VAASSARGPSRSYLGISKPDILAPGVLILAAYPPNIFATSIGTNIQLSTDYILESGTSMA
APHAAGIAAMLKAAHPEWSPSAIRSAMMTTADPLDNTRKPIKDSDINKAATPLDMGAGHV
DPNRALDPGLVYDATPQDYVNLLCSLNFTEEQFKTIARSSANHNCSNPSADLNYPSFIAL
YSIEGNFTLLEQKFKRTVTNVGKGAATYKAKLKAPKNSTISVSPQTLVFKNKNEKQSYTL
TIRYIGDEGQSRNVGSITWVEQNGNHSVRSPIVTSPIIEVW*

Transcript Sequence

Transcript ID

PGSC0003DMT400088761
Transcript Infomation

pacid=37436268 locus=PGSC0003DMG400038332 ID=PGSC0003DMT400088761.v4.03 annot-version=v4.03
Sequence

ATGGAGTTACTTCATCTTCTCCTCTTTTCATGGGCCCTTTCTGCTCATCTCTTTTTAGCT
ATAGCACAAAGATCCACTTACATTGTCCATTTTGACAAATCTTTAATGCCTAATGTCTTT
ACTGATCACCATCATTGGCATTCTTCCACTATTGATTCCATCAAAGCTTCTGTTCCTTCA
TCAGTAGACAGATTCCACTCTGCTCCAAAACTTGTTTACTCTTATGACAATGTGTTACAT
GGATTTAGTGCTGTTTTGTCCAAAGATGAACTGGCAGCTTTGAAGAAGTTACCAGGTTTC
ATTTCAGCTTACAAGGATAGAACTGTAGAACCTCATACTACCCACACATCTGATTTCCTC
AAGCTCAATCCATCATCTGGGCTATGGCCAGCTTCTGGTTTAGGCCAAGATGTGATTGTT
GCTGTTTTGGATTCTGGCATCTGGCCAGAATCTGCGAGTTTTCAAGATGATGGTATGCCT
GAAATCCCGAAAAGGTGGAAAGGAATTTGCAAGCCAGGCACGCAGTTTAACGCTTCAATG
TGCAACAGAAAACTCATTGGGGCTAATTACTTCAATAAGGGTATTTTGGCTAATGATCCC
ACTGTGAACATTTCCATGAATTCTGCCAGGGATACTGATGGTCATGGCACACATTGTGCT
TCCATTGCTGCTGGGAACTTTGCGAAAGGTGTTTCCCATTTTGGATATGCACCAGGAACA
GCTAGAGGGATTGCTCCACGAGCCAGGCTAGCTGTATACAAGTTTAGCTTTAATGAAGGA
ACCTTTACTTCAGATTTAATTGCAGCTATGGACCAAGCTGTTGCGGATGGTGTTGACATG
ATATCCATTTCTTATGGGTACCGTTTCATTCCCTTGTATGAAGATGCTATATCTATTGCT
TCTTTTGGAGCTATGATGAAGGGAGTTCTGGTTTCAGCTTCAGCTGGAAATCGAGGTCCA
GGGATTGGAAGTTTAAACAATGGATCTCCATGGATCTTGTGTGTGGCATCAGGCCTCACT
GACCGGACATTTGCAGGAACTTTGACTTTGGGCAATGGCTTAAAAATTAGGGGGTGGAGC
TTGTTTCCTGCACGAGCCTTTGTCAGGGATTCTCCGGTGATTTACAACAAGACTCTTTCT
GATTGCAGTTCGGAGGAATTGCTATCACAAGTTGAAAATCGTGAAAGCACCATCGTTATA
TGTGATGATAATGGGGATTTCTCTGATCAAATGCGTATTGTCACTCGAGCAAGACTTGGA
GCAGCCATCTTTATTTCTGAGGATCCAGGAGTGTTCAGATCTGCTACATTTCCCAACCCT
GGAGTTGTAATTAACAAAAAGGAAGGGAAACAAGTCATCAATTATGTGAAAAATAGCGTC
ACTCCCACAGCCACCATCACATTCCAAGAGACGTATCTAGATGCAAAGCCAGCACCTATA
GTTGCTGCATCCTCTGCACGAGGCCCCTCCAGAAGTTACTTGGGAATTTCAAAGCCAGAC
ATATTGGCACCAGGGGTGCTGATTCTTGCAGCATATCCACCAAACATATTTGCTACAAGT
ATTGGGACAAACATACAATTGTCCACTGATTACATTCTTGAATCAGGCACATCGATGGCT
GCACCACATGCTGCTGGAATTGCAGCAATGCTAAAAGCCGCGCATCCTGAGTGGAGTCCT
TCAGCTATTCGCTCTGCCATGATGACAACAGCTGATCCTTTAGACAACACTCGAAAACCT
ATTAAAGACTCTGACATTAATAAAGCCGCCACGCCCCTAGACATGGGAGCAGGGCATGTT
GATCCCAACAGAGCTCTTGATCCTGGCCTAGTATATGATGCAACTCCACAAGATTACGTA
AATCTCCTATGCTCTCTGAATTTCACAGAAGAGCAATTCAAGACAATTGCAAGATCATCA
GCCAACCACAACTGCTCAAATCCATCAGCTGATCTGAATTACCCATCATTCATTGCCTTG
TACAGCATTGAGGGAAACTTCACTTTGTTGGAGCAGAAATTCAAGAGGACAGTTACAAAT
GTTGGTAAAGGTGCAGCTACATATAAAGCAAAGCTAAAAGCTCCCAAGAACTCTACAATT
TCAGTGTCACCACAAACATTGGTGTTCAAGAACAAAAATGAGAAGCAAAGTTATACTTTG
ACAATTCGCTATATAGGTGATGAGGGTCAAAGTAGAAACGTTGGTTCGATCACTTGGGTT
GAACAGAATGGTAACCACTCTGTTAGAAGTCCGATAGTAACATCTCCCATTATTGAGGTC
TGGTAA