Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400088646
CDS Infomation

pacid=37442833 polypeptide=PGSC0003DMP400060321 locus=PGSC0003DMG400038217 ID=PGSC0003DMT400088646.v4.03 annot-version=v4.03
Sequence

ATGGCTAATGGAGTTGAAAACAAACTTCATATAGTCATGTTCCCTTGGCTAGCTTTTGGT
CATATTATACCATATCTTGAACTTTCCAAATTAATAGCTCAAAAAGGACACAAAATTTCC
TTCATTTCTACCCCAAGAAACATTGACAGACTCCCAAAACTCCCACTTGAATATTCCACA
TCAATAACCTTAGTGAAAATCCCTCTTCCTCATGTTGATGGATTACCAGAAAATGCAGAA
GCAACTATGGATATTCACACTAAAGATATTGTCTATCTCAAAAAAGCCTTAGATGGAATG
GAACTTGAATTAACAAGTTTCTTGGAGAAAACTTCTCCTGATTGGGTTATTCATGATTTT
GCACCTTATTGGTTAGCACCAATCACAACTAGGTTAAGGATTTCTAGGGGATTTTTTCGA
GTTGTTAATGCTTGGTTTTTGGCTTTTGGGGGATCTACAGACATGATGCTCACTGGCTCT
AGTAATCCACCACCAACACCAGAGGATTTCATGGTGACACCTAAATGGATACCGTTTGAA
ACTAAGGTGGCTTTTCGTCACCATGAAGCTAAGTGGGTAGTCGATGCCATGCAGAAGAAC
GTGTCTGGTGTGTCGGACATATATCGTTCTGGGGCTACGATAAAGGATGTTGACGTAGTT
ATTATACGTCACTGTTGTGAGTTTGAAAGTCAGTGGTTGAAGTTACTAGAGGATCTTTAC
CATAGGCCTATAGTTCCGGTGGGCTTAATGCCACCTTCATTGGACAATAGTGACAACAAT
GGGACTTGGACATGCATCAAAGAATGGCTAGATGAACAAACCAAAGGGTCGGTAGTTTAC
GTAGCGTTAGGGAGTGAAGTGACTATTGGTCCGAGTGAAATCAATGAGTTGGCCTATGGG
TTGGAGTTGTCTGGGGTAGCGTTCTTCTGGGCTCTGAGGAAGCGACCTTACTCAGGAAAC
ATGGATTACGTTGAGCTGCCTGATGGGTTTGAGGAGAGAATACATGGTCGAGGTATAGTA
TGGAAGAGTTGGGTACCTCAGTTGAAGCTACTAAGTCATGAGTCAGTTGGTGGATTCTTG
ACTCATTGTGGATGGAGCTCGATAATAGAAGGGTTAATGTTTGGTCACCCGTTGATTATG
TTGCCATTTTTGGTTGATCAAGGTTTGAATGCAAGAATCCTAGAGGATAAGGAGATTGGT
ATAGAAATACCAAGAAATGAAGAGGATGGTTCATACACAAGGGACTCTGTATCCAGTTCA
GTGAAGTTGGTAATGGTTGAAAAAGATGGAAGGAAAATTAGAGAGAAAGCAAAAGAAATC
AGTTCAATATTTGGGAATAGAAGGCTACATGATAAGTATATAGAAGATCTAATTCAGTTC
TTGGAAGATCATAGAAAAATGGCCAATGGGGCATAG

Peptide Sequence

PEP ID

PGSC0003DMP400060321
PEP Infomation

pacid=37442833 transcript=PGSC0003DMT400088646 locus=PGSC0003DMG400038217 ID=PGSC0003DMT400088646.v4.03 annot-version=v4.03
Sequence

MANGVENKLHIVMFPWLAFGHIIPYLELSKLIAQKGHKISFISTPRNIDRLPKLPLEYST
SITLVKIPLPHVDGLPENAEATMDIHTKDIVYLKKALDGMELELTSFLEKTSPDWVIHDF
APYWLAPITTRLRISRGFFRVVNAWFLAFGGSTDMMLTGSSNPPPTPEDFMVTPKWIPFE
TKVAFRHHEAKWVVDAMQKNVSGVSDIYRSGATIKDVDVVIIRHCCEFESQWLKLLEDLY
HRPIVPVGLMPPSLDNSDNNGTWTCIKEWLDEQTKGSVVYVALGSEVTIGPSEINELAYG
LELSGVAFFWALRKRPYSGNMDYVELPDGFEERIHGRGIVWKSWVPQLKLLSHESVGGFL
THCGWSSIIEGLMFGHPLIMLPFLVDQGLNARILEDKEIGIEIPRNEEDGSYTRDSVSSS
VKLVMVEKDGRKIREKAKEISSIFGNRRLHDKYIEDLIQFLEDHRKMANGA*

Transcript Sequence

Transcript ID

PGSC0003DMT400088646
Transcript Infomation

pacid=37442833 locus=PGSC0003DMG400038217 ID=PGSC0003DMT400088646.v4.03 annot-version=v4.03
Sequence

ATGGCTAATGGAGTTGAAAACAAACTTCATATAGTCATGTTCCCTTGGCTAGCTTTTGGT
CATATTATACCATATCTTGAACTTTCCAAATTAATAGCTCAAAAAGGACACAAAATTTCC
TTCATTTCTACCCCAAGAAACATTGACAGACTCCCAAAACTCCCACTTGAATATTCCACA
TCAATAACCTTAGTGAAAATCCCTCTTCCTCATGTTGATGGATTACCAGAAAATGCAGAA
GCAACTATGGATATTCACACTAAAGATATTGTCTATCTCAAAAAAGCCTTAGATGGAATG
GAACTTGAATTAACAAGTTTCTTGGAGAAAACTTCTCCTGATTGGGTTATTCATGATTTT
GCACCTTATTGGTTAGCACCAATCACAACTAGGTTAAGGATTTCTAGGGGATTTTTTCGA
GTTGTTAATGCTTGGTTTTTGGCTTTTGGGGGATCTACAGACATGATGCTCACTGGCTCT
AGTAATCCACCACCAACACCAGAGGATTTCATGGTGACACCTAAATGGATACCGTTTGAA
ACTAAGGTGGCTTTTCGTCACCATGAAGCTAAGTGGGTAGTCGATGCCATGCAGAAGAAC
GTGTCTGGTGTGTCGGACATATATCGTTCTGGGGCTACGATAAAGGATGTTGACGTAGTT
ATTATACGTCACTGTTGTGAGTTTGAAAGTCAGTGGTTGAAGTTACTAGAGGATCTTTAC
CATAGGCCTATAGTTCCGGTGGGCTTAATGCCACCTTCATTGGACAATAGTGACAACAAT
GGGACTTGGACATGCATCAAAGAATGGCTAGATGAACAAACCAAAGGGTCGGTAGTTTAC
GTAGCGTTAGGGAGTGAAGTGACTATTGGTCCGAGTGAAATCAATGAGTTGGCCTATGGG
TTGGAGTTGTCTGGGGTAGCGTTCTTCTGGGCTCTGAGGAAGCGACCTTACTCAGGAAAC
ATGGATTACGTTGAGCTGCCTGATGGGTTTGAGGAGAGAATACATGGTCGAGGTATAGTA
TGGAAGAGTTGGGTACCTCAGTTGAAGCTACTAAGTCATGAGTCAGTTGGTGGATTCTTG
ACTCATTGTGGATGGAGCTCGATAATAGAAGGGTTAATGTTTGGTCACCCGTTGATTATG
TTGCCATTTTTGGTTGATCAAGGTTTGAATGCAAGAATCCTAGAGGATAAGGAGATTGGT
ATAGAAATACCAAGAAATGAAGAGGATGGTTCATACACAAGGGACTCTGTATCCAGTTCA
GTGAAGTTGGTAATGGTTGAAAAAGATGGAAGGAAAATTAGAGAGAAAGCAAAAGAAATC
AGTTCAATATTTGGGAATAGAAGGCTACATGATAAGTATATAGAAGATCTAATTCAGTTC
TTGGAAGATCATAGAAAAATGGCCAATGGGGCATAG