Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400088594
CDS Infomation

pacid=37440248 polypeptide=PGSC0003DMP400060269 locus=PGSC0003DMG400038165 ID=PGSC0003DMT400088594.v4.03 annot-version=v4.03
Sequence

ATGAGTTCTACTCACTCGATCAAGCAAGAAATCATTGATCTGGATGATATAGATGATGAA
AATACAGCTATGATTTGTGTAAGTAGTAGTAGTGGAGGAAGAAGAGGAAGTAATTTTTCG
CGTTTTTTCGATAGTGATAGTGATGATGATGATAATGATAATGATAATGATTTGGGATTG
AGTCCGTTGAAAAAGATGAAAGTTGAAGCGGCTTTGCCAGTGGGATTTCTTGATCCACTT
CCACCAGAAGAGCGCGTGGCTTTTAACCGGTCACTTGAAGTTGTTGTAAGGAATAATACT
GAATTGGGAGTGGGTACGGAAAAAGTTGTTGTTACATCTAATAAGCAGTTTTGGAAAGCT
GGAGATTATGAAGGGATTGATGGTGGTTTTGCTGCTGGTCATGCAGAAGGCATGGATCAC
GTGAGAGTTCATCCAAAATTCTTGCATTCAAATGCCACCAGTCATAAATGGGCTTTGGGA
GCTTTTGCTGAGCTTCTTGATAATGCTATGGACGAGGTTTGCAATGGAGCTACCTATGTC
AGTGTAGATGTTCTTGATAATAAGAAAGAGAAGGGTAAAATGATATTAGTTGAAGATAAT
GGTGGTGGAATGACTCCTGACAAAATGCGTCAATGCATGTCTCTTGGATACTCAGCTAAA
AGTAAATTAGCAAATACTATAGGCCAATATGGAAATGGTTTCAAAACAAGTAGTATGAGA
CTCGGGGGAGATGTGATTGTGTTCTCGCGTTGTCAGGGAAAGGACGGACTAAGCACAACA
CAAAGTGTTGGAATGTTGTCGTATACATTTTTAAGGACCACAGGAAAAGAAGATATCATT
GTTCCTATGATTGATTTTGTAAAGAGAGGAGAAATTTGGGAAATGTTGGTTCGATCTACA
CCTGATGATTGGAAAAGAAATTCAGATACGATAGTACAATGGTCTCCGTTTGAAAGTGAA
GAAGATCTCTTCCTGCAGTTTGAATTGTTGGATAATCAAGGAACACGAATTATCATATAC
AATCTCTGGGAAGATGAAAAAGGAGACACTGAACTTGATTTTGACACCGATCCTCATGAC
ATTCAAATCAAGGGTGTTAGTCGAGACGAAAAGAAGATTGAGATGGCAAAAATATATCCC
AACTCCAGACATTTTCTAACTTATCAACATTCTTTAAGGAGCTATGCTTCAATTTTGTAT
TTGAGGCTTTCTCCTGGATTTCAAATCATTTTGCGTGGGAAAGATGTTGAGCATCATAAT
TTGATTAATGATATGAATCTTGCCAAGAAGAATACGTACAGACCTCAACCCATTGGTGAT
GAAACATCCAAGGATCCAAATGCGGTCGCTGTGGTAACTATTGGTTTTGTAAAGGATGCA
GAACATCACATCGATGTTCAAGGTTTCAACGTTTATCACAAGAACCGGCTAATTAAGCCT
TTTTGGAGGGTGTGGAATGCTGCTGGAAGTGATGGTCGTGGAGCGATAGGCGTCTTAGAA
GCTAATTTTGTTAAGCCAGCTCATGATAAACAGGATTTTGAACGCACGATTGTGCTTGCT
AGACTCGAGGCACGTTTACAATTTATGCAGAAGCAGTACTGGCGTGATAATTGCCATGAA
ATTGGTTATGCTGATCGTCGAAATATAAAGAACAGTGTCTCTTCTGAGGAAGAAACAAAC
ACCTCTGCTAAAAGCAACTCATGTTCACGATTTTCCTCAAATGTCCATACAACCAATCGC
GATGTCAATACAACAAATCGTGATGTCCCTACAACCAGTCGTGATGGGCCTACAACCAGT
TACGACAAATCAAAATCAAAATACACTGGAGGTGAACACAAGACAGGACAAGTCCAGTCT
TCGATACAAGCAACAAACCAGACCATGTGGAGAGAGTTATCAAATAGGCCAACTCGTCAA
ATTCCAACAAATTTGAGTGTGAAGATACAAGATACTTCATCCAACTTGAGAGAAGAGAAT
CACGTTACTAAGGATCGTTTACAACAGGCTTTACGTGATCTGCAGTATGAAAAAAACAAG
AATAAAAGTCTAGAAGGCCAACTTAAAGCAGCACAAAGGTTGATAACAGATTTGAACAGC
AATCACGACAATTTAGCTCACATGCTATTAGAAGAACGAAGACGATCAAGGGAATCTTCT
GTTATCAACGAAGAGCTGCGCGATAAAGTGAAGTTGCTAGAAAATAGGATGCCATTTACA
AGTGTCAAGCGCGAACATTGA

Peptide Sequence

PEP ID

PGSC0003DMP400060269
PEP Infomation

pacid=37440248 transcript=PGSC0003DMT400088594 locus=PGSC0003DMG400038165 ID=PGSC0003DMT400088594.v4.03 annot-version=v4.03
Sequence

MSSTHSIKQEIIDLDDIDDENTAMICVSSSSGGRRGSNFSRFFDSDSDDDDNDNDNDLGL
SPLKKMKVEAALPVGFLDPLPPEERVAFNRSLEVVVRNNTELGVGTEKVVVTSNKQFWKA
GDYEGIDGGFAAGHAEGMDHVRVHPKFLHSNATSHKWALGAFAELLDNAMDEVCNGATYV
SVDVLDNKKEKGKMILVEDNGGGMTPDKMRQCMSLGYSAKSKLANTIGQYGNGFKTSSMR
LGGDVIVFSRCQGKDGLSTTQSVGMLSYTFLRTTGKEDIIVPMIDFVKRGEIWEMLVRST
PDDWKRNSDTIVQWSPFESEEDLFLQFELLDNQGTRIIIYNLWEDEKGDTELDFDTDPHD
IQIKGVSRDEKKIEMAKIYPNSRHFLTYQHSLRSYASILYLRLSPGFQIILRGKDVEHHN
LINDMNLAKKNTYRPQPIGDETSKDPNAVAVVTIGFVKDAEHHIDVQGFNVYHKNRLIKP
FWRVWNAAGSDGRGAIGVLEANFVKPAHDKQDFERTIVLARLEARLQFMQKQYWRDNCHE
IGYADRRNIKNSVSSEEETNTSAKSNSCSRFSSNVHTTNRDVNTTNRDVPTTSRDGPTTS
YDKSKSKYTGGEHKTGQVQSSIQATNQTMWRELSNRPTRQIPTNLSVKIQDTSSNLREEN
HVTKDRLQQALRDLQYEKNKNKSLEGQLKAAQRLITDLNSNHDNLAHMLLEERRRSRESS
VINEELRDKVKLLENRMPFTSVKREH*

Transcript Sequence

Transcript ID

PGSC0003DMT400088594
Transcript Infomation

pacid=37440248 locus=PGSC0003DMG400038165 ID=PGSC0003DMT400088594.v4.03 annot-version=v4.03
Sequence

ATGAGTTCTACTCACTCGATCAAGCAAGAAATCATTGATCTGGATGATATAGATGATGAA
AATACAGCTATGATTTGTGTAAGTAGTAGTAGTGGAGGAAGAAGAGGAAGTAATTTTTCG
CGTTTTTTCGATAGTGATAGTGATGATGATGATAATGATAATGATAATGATTTGGGATTG
AGTCCGTTGAAAAAGATGAAAGTTGAAGCGGCTTTGCCAGTGGGATTTCTTGATCCACTT
CCACCAGAAGAGCGCGTGGCTTTTAACCGGTCACTTGAAGTTGTTGTAAGGAATAATACT
GAATTGGGAGTGGGTACGGAAAAAGTTGTTGTTACATCTAATAAGCAGTTTTGGAAAGCT
GGAGATTATGAAGGGATTGATGGTGGTTTTGCTGCTGGTCATGCAGAAGGCATGGATCAC
GTGAGAGTTCATCCAAAATTCTTGCATTCAAATGCCACCAGTCATAAATGGGCTTTGGGA
GCTTTTGCTGAGCTTCTTGATAATGCTATGGACGAGGTTTGCAATGGAGCTACCTATGTC
AGTGTAGATGTTCTTGATAATAAGAAAGAGAAGGGTAAAATGATATTAGTTGAAGATAAT
GGTGGTGGAATGACTCCTGACAAAATGCGTCAATGCATGTCTCTTGGATACTCAGCTAAA
AGTAAATTAGCAAATACTATAGGCCAATATGGAAATGGTTTCAAAACAAGTAGTATGAGA
CTCGGGGGAGATGTGATTGTGTTCTCGCGTTGTCAGGGAAAGGACGGACTAAGCACAACA
CAAAGTGTTGGAATGTTGTCGTATACATTTTTAAGGACCACAGGAAAAGAAGATATCATT
GTTCCTATGATTGATTTTGTAAAGAGAGGAGAAATTTGGGAAATGTTGGTTCGATCTACA
CCTGATGATTGGAAAAGAAATTCAGATACGATAGTACAATGGTCTCCGTTTGAAAGTGAA
GAAGATCTCTTCCTGCAGTTTGAATTGTTGGATAATCAAGGAACACGAATTATCATATAC
AATCTCTGGGAAGATGAAAAAGGAGACACTGAACTTGATTTTGACACCGATCCTCATGAC
ATTCAAATCAAGGGTGTTAGTCGAGACGAAAAGAAGATTGAGATGGCAAAAATATATCCC
AACTCCAGACATTTTCTAACTTATCAACATTCTTTAAGGAGCTATGCTTCAATTTTGTAT
TTGAGGCTTTCTCCTGGATTTCAAATCATTTTGCGTGGGAAAGATGTTGAGCATCATAAT
TTGATTAATGATATGAATCTTGCCAAGAAGAATACGTACAGACCTCAACCCATTGGTGAT
GAAACATCCAAGGATCCAAATGCGGTCGCTGTGGTAACTATTGGTTTTGTAAAGGATGCA
GAACATCACATCGATGTTCAAGGTTTCAACGTTTATCACAAGAACCGGCTAATTAAGCCT
TTTTGGAGGGTGTGGAATGCTGCTGGAAGTGATGGTCGTGGAGCGATAGGCGTCTTAGAA
GCTAATTTTGTTAAGCCAGCTCATGATAAACAGGATTTTGAACGCACGATTGTGCTTGCT
AGACTCGAGGCACGTTTACAATTTATGCAGAAGCAGTACTGGCGTGATAATTGCCATGAA
ATTGGTTATGCTGATCGTCGAAATATAAAGAACAGTGTCTCTTCTGAGGAAGAAACAAAC
ACCTCTGCTAAAAGCAACTCATGTTCACGATTTTCCTCAAATGTCCATACAACCAATCGC
GATGTCAATACAACAAATCGTGATGTCCCTACAACCAGTCGTGATGGGCCTACAACCAGT
TACGACAAATCAAAATCAAAATACACTGGAGGTGAACACAAGACAGGACAAGTCCAGTCT
TCGATACAAGCAACAAACCAGACCATGTGGAGAGAGTTATCAAATAGGCCAACTCGTCAA
ATTCCAACAAATTTGAGTGTGAAGATACAAGATACTTCATCCAACTTGAGAGAAGAGAAT
CACGTTACTAAGGATCGTTTACAACAGGCTTTACGTGATCTGCAGTATGAAAAAAACAAG
AATAAAAGTCTAGAAGGCCAACTTAAAGCAGCACAAAGGTTGATAACAGATTTGAACAGC
AATCACGACAATTTAGCTCACATGCTATTAGAAGAACGAAGACGATCAAGGGAATCTTCT
GTTATCAACGAAGAGCTGCGCGATAAAGTGAAGTTGCTAGAAAATAGGATGCCATTTACA
AGTGTCAAGCGCGAACATTGA