Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400088587
CDS Infomation

pacid=37458584 polypeptide=PGSC0003DMP400060262 locus=PGSC0003DMG400038158 ID=PGSC0003DMT400088587.v4.03 annot-version=v4.03
Sequence

ATGAAGGTGTTCCAAAAGAAAAAACTTTCAAGAGTATTTTCAGAGGACTATGATGGGGTG
CAATGGAAGATACTAGATCCGCGAGGACGTCCTATAAACATATGGAACAAATGTTTCCTT
ATTGCTTCTCTAACTTCTCTGTTTGTTGATCCATTGTTCTTCTATTTACCAAGTGTTAAC
GACGAAATCTGTATGGATGCAAGTTATCCTATGGAGATAGTCCTTACAATCGTTCGATCA
GTCATAGATGCATTTTATCTGGTTCAGATTTTAGTTCAGTTTCGAACAGCTTACGTTGCA
CCTTCCTCTCGTGTTTTTGGAAGAGGTGAGCTAGTCATTGATTCTTCAAAGATTGCTTCA
AGGTATCTTCGTAAGGACTTTTTGCTCGACGTCTTGGCTACTCTTCCTCTACCTCAGGTT
TTGATTTGGGCTGCAATTCCATCTCTGAGAGGTTCAAATAGGATTGGTGCAAAACACGCC
TTACGCCTAACTATCATTTCTCAGTTCCTCTTGAGGCTATGCCTGATTTTTCCACTTTCA
TCTCACATTATCAAGACCACTGGTGTGATGGTGGAAGCTGCTTGGGCTGGCGCGGTTTAT
AACCTCGTGCTCTTCATGTTGGCAAGTCATGTCATGGGATCTTGCTGGTACCTTTTAGCT
GTGGAGAGGCAAGAACAGTGTTGGAAGAAGATTTGTGATCAACAGCAACCGTATTGCCAA
TATTGGTATTTCGACTGCCAGAGGAAGAACGATAACAGTAGAATCGCGTGGTACCAGCGG
AGCAATATATCTTCATTATGTGGTCCTAGCAGCAACTTCTTCCAATTTGGAATCTTTAAT
GATGCACTGACTTATCGCGTTACACAGTCATCGTTCTTGAACAAGTATACGTATTGTTTC
TGGTGGGGCTTAAGGAACCTAAGCTCTATCGGGCAGAATCTCTTGACTACTACTGACATT
AATGAGATAAATTTCGCGGTTGTTCTTGCAATTCTTGGATTGTTGCTTTTCGCGTTACTT
ATTGGGAATATGCAGACCTTCCTTCAATCTACTACTATGAGACTCGAAGAATGGAGGATT
AGGAGGACGGATACAGAAGAATGGATGCATCATCGTCAACTCCCTCACGATCTAAAGGAG
AGGGTTCGGAAATATGATGTGTATCGTTGGGTGACAACAAGAGGTGTTGATGAAGAATCC
ATCGTTAGAAGCCTTCCTGTTGATCTCAGAAGGGACATCAAACGTCATCTTTGTCTTGAT
CTAGTTCGTCGAGTACCTTTGTTTGATCAAATGGATGAGTGTATCTTAGATGCAATATGT
GAAAGGTTGAAACCACTTCTATACACCACGGGAACTTGCCTAGTTCGCGAAGCTGATCCA
GTGAACGAAATGCACTTCATTATAAGAGGACATTTGGATTCCTACACTACTGATGGAGGA
AGAACAGGTTTCTTTAACTCGTGTCAGCTCGGTCCATGTGATTTCTGTGGTGAAGAATTA
CTAACATGGGCACTAGACCCTCGTCCGAGCATCATCCTTCCCTCCTCTACACGTACAGTG
ACCGTGCTCACTGAAGTAGAAGCGTTTGCATTGGCTGCAGAAGATGTGACCTTTGTGGCA
TCACAGTTCCGTAAACTGCATAGCAAGCAGTTAAGGCATACATTCAGGTTTTACTCGAAC
CAATGGAGGACTTGGGCCGCGTGTTTTATACAAGCAGCTTGGTTTCGATACAAGAGAAGG
AGAGAGGCTGCTGCGCTTAATAAAGCGAAGCAGAGTCCCCTGGCTGCTCCTCTGCCTACT
GAACCACGAGATGAACGAATTAGAAGCGTGTCGTTGGGACAAAAGGCTTCAGAGTTTGCT
GTGTATGCTGCAACATTGGCAGCAAGCAACAGAAAAGGTGGAAGCATGAGGGGAGAACTA
GAAATTATTAGTTCATTACAAAAACCTGTGGAACCTGATTTTTCGGTTGAGGATAGATGA

Peptide Sequence

PEP ID

PGSC0003DMP400060262
PEP Infomation

pacid=37458584 transcript=PGSC0003DMT400088587 locus=PGSC0003DMG400038158 ID=PGSC0003DMT400088587.v4.03 annot-version=v4.03
Sequence

MKVFQKKKLSRVFSEDYDGVQWKILDPRGRPINIWNKCFLIASLTSLFVDPLFFYLPSVN
DEICMDASYPMEIVLTIVRSVIDAFYLVQILVQFRTAYVAPSSRVFGRGELVIDSSKIAS
RYLRKDFLLDVLATLPLPQVLIWAAIPSLRGSNRIGAKHALRLTIISQFLLRLCLIFPLS
SHIIKTTGVMVEAAWAGAVYNLVLFMLASHVMGSCWYLLAVERQEQCWKKICDQQQPYCQ
YWYFDCQRKNDNSRIAWYQRSNISSLCGPSSNFFQFGIFNDALTYRVTQSSFLNKYTYCF
WWGLRNLSSIGQNLLTTTDINEINFAVVLAILGLLLFALLIGNMQTFLQSTTMRLEEWRI
RRTDTEEWMHHRQLPHDLKERVRKYDVYRWVTTRGVDEESIVRSLPVDLRRDIKRHLCLD
LVRRVPLFDQMDECILDAICERLKPLLYTTGTCLVREADPVNEMHFIIRGHLDSYTTDGG
RTGFFNSCQLGPCDFCGEELLTWALDPRPSIILPSSTRTVTVLTEVEAFALAAEDVTFVA
SQFRKLHSKQLRHTFRFYSNQWRTWAACFIQAAWFRYKRRREAAALNKAKQSPLAAPLPT
EPRDERIRSVSLGQKASEFAVYAATLAASNRKGGSMRGELEIISSLQKPVEPDFSVEDR*

Transcript Sequence

Transcript ID

PGSC0003DMT400088587
Transcript Infomation

pacid=37458584 locus=PGSC0003DMG400038158 ID=PGSC0003DMT400088587.v4.03 annot-version=v4.03
Sequence

ATGAAGGTGTTCCAAAAGAAAAAACTTTCAAGAGTATTTTCAGAGGACTATGATGGGGTG
CAATGGAAGATACTAGATCCGCGAGGACGTCCTATAAACATATGGAACAAATGTTTCCTT
ATTGCTTCTCTAACTTCTCTGTTTGTTGATCCATTGTTCTTCTATTTACCAAGTGTTAAC
GACGAAATCTGTATGGATGCAAGTTATCCTATGGAGATAGTCCTTACAATCGTTCGATCA
GTCATAGATGCATTTTATCTGGTTCAGATTTTAGTTCAGTTTCGAACAGCTTACGTTGCA
CCTTCCTCTCGTGTTTTTGGAAGAGGTGAGCTAGTCATTGATTCTTCAAAGATTGCTTCA
AGGTATCTTCGTAAGGACTTTTTGCTCGACGTCTTGGCTACTCTTCCTCTACCTCAGGTT
TTGATTTGGGCTGCAATTCCATCTCTGAGAGGTTCAAATAGGATTGGTGCAAAACACGCC
TTACGCCTAACTATCATTTCTCAGTTCCTCTTGAGGCTATGCCTGATTTTTCCACTTTCA
TCTCACATTATCAAGACCACTGGTGTGATGGTGGAAGCTGCTTGGGCTGGCGCGGTTTAT
AACCTCGTGCTCTTCATGTTGGCAAGTCATGTCATGGGATCTTGCTGGTACCTTTTAGCT
GTGGAGAGGCAAGAACAGTGTTGGAAGAAGATTTGTGATCAACAGCAACCGTATTGCCAA
TATTGGTATTTCGACTGCCAGAGGAAGAACGATAACAGTAGAATCGCGTGGTACCAGCGG
AGCAATATATCTTCATTATGTGGTCCTAGCAGCAACTTCTTCCAATTTGGAATCTTTAAT
GATGCACTGACTTATCGCGTTACACAGTCATCGTTCTTGAACAAGTATACGTATTGTTTC
TGGTGGGGCTTAAGGAACCTAAGCTCTATCGGGCAGAATCTCTTGACTACTACTGACATT
AATGAGATAAATTTCGCGGTTGTTCTTGCAATTCTTGGATTGTTGCTTTTCGCGTTACTT
ATTGGGAATATGCAGACCTTCCTTCAATCTACTACTATGAGACTCGAAGAATGGAGGATT
AGGAGGACGGATACAGAAGAATGGATGCATCATCGTCAACTCCCTCACGATCTAAAGGAG
AGGGTTCGGAAATATGATGTGTATCGTTGGGTGACAACAAGAGGTGTTGATGAAGAATCC
ATCGTTAGAAGCCTTCCTGTTGATCTCAGAAGGGACATCAAACGTCATCTTTGTCTTGAT
CTAGTTCGTCGAGTACCTTTGTTTGATCAAATGGATGAGTGTATCTTAGATGCAATATGT
GAAAGGTTGAAACCACTTCTATACACCACGGGAACTTGCCTAGTTCGCGAAGCTGATCCA
GTGAACGAAATGCACTTCATTATAAGAGGACATTTGGATTCCTACACTACTGATGGAGGA
AGAACAGGTTTCTTTAACTCGTGTCAGCTCGGTCCATGTGATTTCTGTGGTGAAGAATTA
CTAACATGGGCACTAGACCCTCGTCCGAGCATCATCCTTCCCTCCTCTACACGTACAGTG
ACCGTGCTCACTGAAGTAGAAGCGTTTGCATTGGCTGCAGAAGATGTGACCTTTGTGGCA
TCACAGTTCCGTAAACTGCATAGCAAGCAGTTAAGGCATACATTCAGGTTTTACTCGAAC
CAATGGAGGACTTGGGCCGCGTGTTTTATACAAGCAGCTTGGTTTCGATACAAGAGAAGG
AGAGAGGCTGCTGCGCTTAATAAAGCGAAGCAGAGTCCCCTGGCTGCTCCTCTGCCTACT
GAACCACGAGATGAACGAATTAGAAGCGTGTCGTTGGGACAAAAGGCTTCAGAGTTTGCT
GTGTATGCTGCAACATTGGCAGCAAGCAACAGAAAAGGTGGAAGCATGAGGGGAGAACTA
GAAATTATTAGTTCATTACAAAAACCTGTGGAACCTGATTTTTCGGTTGAGGATAGATGA