Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400088401
CDS Infomation

pacid=37463108 polypeptide=PGSC0003DMP400060076 locus=PGSC0003DMG400037972 ID=PGSC0003DMT400088401.v4.03 annot-version=v4.03
Sequence

ATGGAGAACGACGAAGAAACTCAGTCCCATCAGTCCGGTGGTTCTGGATCTCCGGAATCG
CCGCGATCTAACGGGAGGATAACGGTGACGGTAGCATCAGCGCCTCCTCAGAACACCTTG
ACTTTGGCTCTACCGATACAGCAATCGAGACCTGCTGGAGCGTCTGGCGGCGGTGGTAGT
GGTGGTGGTGGAAGGGAGGATTGTTGGAGTGAAGAGGCTACGGCTGTACTGATCGAGGCT
TGGGGTGAGCGGTACATGGAATTGAGTAGAGGTAATTTGAAGCAGAAGCACTGGAAAGAT
GTTGCTGACATTGTTTGCCGTCAGGAGGATTATAGAAAAACGCCTAAAACTGATATTCAG
TGCAAAAATCGAATTGATACTGTAAAGAAGAAATACAAGCTGGAGAAATCTAAGATCGCT
GCGGGTCAAGGACCAAGCAAGTGGCCTTTCTTTGATAAGCTCGATATGTTGATAGGTCCG
ACGGCTAAGATCAATCCTACCGTCGCTGCCGGACCGTCTAATTTGTATTCAGGTAATCAG
CATGTGCCTATGGGTATTCCTATGGGAGTCAGGTCCCTTCCTCAGCTTCGACAACATCAA
CAGCTGCAGAAGCAAAAGCAACCGTCCCGGAAAAGGCCTCACATGGATTCAGACACATCG
GAATCGGAGTCAGAACCGGACCTTTCACCTGCTTCAACCGACAGTTTTCCTCCGGGCACA
TTTCAAAAAAAGAGACCAAGGTTTCAGAAGGAAATGCTGAATTCAAGCGCATTAAGGCAG
GGAGGAATTGGAATTGGAGAAGCTAGTGGAAAGGAAGGTGGAAACAAAAATTGGGGGAAT
TCAGTGAGGGAATTGACACAGGCAATACTAAAATTCGGGGAAGCATATGAACAAACAGAG
AGCGCGAAGCTGCAACAAATGGTGGAGATGGAGAAGCAGAGGATGAAATTTGCGAAAGAA
ATGGAATTGCAGAGAATGCAGTTCTTCATGAATACACAATTGGAAATTTCACAGCTTAAG
CACAGGAGAAGTGGAAACAGCAACCATCACAGCAACAACCATGCTGCCGCCACCAGCAAC
CATAACAACAACAACAACAACAACAGTGATAGCAGTATTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400060076
PEP Infomation

pacid=37463108 transcript=PGSC0003DMT400088401 locus=PGSC0003DMG400037972 ID=PGSC0003DMT400088401.v4.03 annot-version=v4.03
Sequence

MENDEETQSHQSGGSGSPESPRSNGRITVTVASAPPQNTLTLALPIQQSRPAGASGGGGS
GGGGREDCWSEEATAVLIEAWGERYMELSRGNLKQKHWKDVADIVCRQEDYRKTPKTDIQ
CKNRIDTVKKKYKLEKSKIAAGQGPSKWPFFDKLDMLIGPTAKINPTVAAGPSNLYSGNQ
HVPMGIPMGVRSLPQLRQHQQLQKQKQPSRKRPHMDSDTSESESEPDLSPASTDSFPPGT
FQKKRPRFQKEMLNSSALRQGGIGIGEASGKEGGNKNWGNSVRELTQAILKFGEAYEQTE
SAKLQQMVEMEKQRMKFAKEMELQRMQFFMNTQLEISQLKHRRSGNSNHHSNNHAAATSN
HNNNNNNNSDSSI*

Transcript Sequence

Transcript ID

PGSC0003DMT400088401
Transcript Infomation

pacid=37463108 locus=PGSC0003DMG400037972 ID=PGSC0003DMT400088401.v4.03 annot-version=v4.03
Sequence

ATGGAGAACGACGAAGAAACTCAGTCCCATCAGTCCGGTGGTTCTGGATCTCCGGAATCG
CCGCGATCTAACGGGAGGATAACGGTGACGGTAGCATCAGCGCCTCCTCAGAACACCTTG
ACTTTGGCTCTACCGATACAGCAATCGAGACCTGCTGGAGCGTCTGGCGGCGGTGGTAGT
GGTGGTGGTGGAAGGGAGGATTGTTGGAGTGAAGAGGCTACGGCTGTACTGATCGAGGCT
TGGGGTGAGCGGTACATGGAATTGAGTAGAGGTAATTTGAAGCAGAAGCACTGGAAAGAT
GTTGCTGACATTGTTTGCCGTCAGGAGGATTATAGAAAAACGCCTAAAACTGATATTCAG
TGCAAAAATCGAATTGATACTGTAAAGAAGAAATACAAGCTGGAGAAATCTAAGATCGCT
GCGGGTCAAGGACCAAGCAAGTGGCCTTTCTTTGATAAGCTCGATATGTTGATAGGTCCG
ACGGCTAAGATCAATCCTACCGTCGCTGCCGGACCGTCTAATTTGTATTCAGGTAATCAG
CATGTGCCTATGGGTATTCCTATGGGAGTCAGGTCCCTTCCTCAGCTTCGACAACATCAA
CAGCTGCAGAAGCAAAAGCAACCGTCCCGGAAAAGGCCTCACATGGATTCAGACACATCG
GAATCGGAGTCAGAACCGGACCTTTCACCTGCTTCAACCGACAGTTTTCCTCCGGGCACA
TTTCAAAAAAAGAGACCAAGGTTTCAGAAGGAAATGCTGAATTCAAGCGCATTAAGGCAG
GGAGGAATTGGAATTGGAGAAGCTAGTGGAAAGGAAGGTGGAAACAAAAATTGGGGGAAT
TCAGTGAGGGAATTGACACAGGCAATACTAAAATTCGGGGAAGCATATGAACAAACAGAG
AGCGCGAAGCTGCAACAAATGGTGGAGATGGAGAAGCAGAGGATGAAATTTGCGAAAGAA
ATGGAATTGCAGAGAATGCAGTTCTTCATGAATACACAATTGGAAATTTCACAGCTTAAG
CACAGGAGAAGTGGAAACAGCAACCATCACAGCAACAACCATGCTGCCGCCACCAGCAAC
CATAACAACAACAACAACAACAACAGTGATAGCAGTATTTAA