Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400087883
CDS Infomation

pacid=37477863 polypeptide=PGSC0003DMP400059558 locus=PGSC0003DMG400037454 ID=PGSC0003DMT400087883.v4.03 annot-version=v4.03
Sequence

ATGGACAAAGTTTATGCGGAGCTAGATGTTGTTAAAGGCGAGGTGGAAAAGCTCAGAGAA
GAATGCCGGACCAAAACAGAGATGACGGAGAGTTTGAGGAAAGCCCACATTGATCAATTA
TCAAAACTTCAAGAAGCTAAGTTGGAGATTGGTAGACAGGCAAATGAACTATTTGTTAAA
TCTGAGGAAATATTTGAGATCAAGAAACTCTACGATGATATCAAGTCCATTGTACATGAG
AAAGAAACATGTCTCCAGAATCTTAGCTCTGCTCATGAGAACCTGCAACTAGATTATGGG
AAGAAAATTGGGAAGTTGGAAGTACAAAACAAGGATTTGGTGTTGGCTCTGGATGAAGCA
ACATCCAAAATTCAAGATTTGGAAATGCAGATTTCTGCTAGTAATAATGAAATCAATGCT
CTTAAGCAAATCATGTCAGTTAGGCAGGAAATCTGTGTTAAATCAGAGCTAAAAACAAGG
GCATCCAAAGATCTGAAAGATGGAGATGCCATTATCCAAAAACTTGATGAAGAAAATAGG
ATTGCGAAAGATCAGTTGAAATGGAAGAGTGAACAATTTAAACACCTTGAAGAAGCTCAC
AAAAGAAACCATGATCAGTTCAAAACCAGTAAGGTGGAGTGGGGCCAGGAAAAGTCAGCA
ATGCTTGAAGAGATCTCTTCATTGCAAGCAAGATTGGATTCTCAGACTCGAATCTCAGAA
GACCTCCAAAGCCAATTGAGGATGAGTAACCAAGCTTTAGCTCATCAAGAAAGCAGAAAG
AGAATTCTGGAAATTGAAGTGTCTGAGTTTAGATCTCAATTCCATGATATCTCTTTAGAG
TGCCAAGAAGCAAGCTCAAAGCTTGAGAACTTGACCATCAAGAGGGATGAAGAAATTGGA
GAGTTAAGAAACTTACTCCGAACGAAAAAAGCACTGTTCAAGGATACAAAATGCAAAAGT
ATACAGCTTGAACAGGAAAATCAAGATTTACGAAGATCTCTCAAAGAGCTTCAAGAGTCT
CAAATCCAGGGTACTGCTTCCACTTCTGTACTTAAGAAACTGCAAAGCAATTTCCAGCAT
TTGAAGCAATTACACAAGAAATGTTCCTTAAACCTCAAAGAAAAGGAAGCTGAATGGAGC
TCACAGATAGGAAAAGTGGCAGAAGATATGAAAAGATGCATGTCTGAGTTAAAAAGTAAA
GAAAAACATATAGACGAGCTAGAAAAGGAGCTGGAAGATCGCCGTGATGCATGTGATGTT
CTTACTGGAGAGTTATCTGTCTTAATCTTGGTTTTAAAATCAGAATTTCATACTGGTAGC
AAGGAGCTCTCTAGAGCCAACACGGAACAAGAGCCAAATAGCAAAAGTCTAGTACATCAA
AAGAATGAACAAGCAACCGTTTTAGAGGCAGAACTGAGTGAGTACAAAAAGATGCTTGAA
GAGTCATCTGATTGCCAAGTTCACCTCAGGGAACAGGTCCTGAAATTGGGTAATGCTCTC
AAAGATGCTTCTGCTGCTTCAGAAGAAGCTAAAGATGACCTGGCCAAAGCAAGGAAAGAA
GTCAAAGAAAGCAAACTTGAACTAGAGAAGTGGAAAGCTGAAGCAGGAAATCTTAAAGAC
TACCTTGAAGAGAACCAATTTTCCCAAAAGCAAGAGAAGGAGATCTTACTTGGGATTTTG
AAGGAGGGAGAAGCCAAAATTAATGAGCTACAGCAACAGATTACAGAAGCAGAGTTGAAG
ATTGTTGAAAGAACAGAGGCAGTGAATGATTTAAATCAGGAGAAGCTTCAATACTATCAA
ATTGCAGAAGGCAAGGGTAACACCATAGAAATTCTTCAAACTAAGATTTCTTGCTTGGAG
CAAAAGTTGGATGATAAAGACCTTCAGAATGAGCAAATACAATCAGATGTGCGGAAGGCT
TTTGATCAGGAGAAGGAGAACCTCTTGCTGAATCTGAAAGAGAAAGACAGGAAAATACAA
GATATTCTCAAACAGGCCAAAGATTTAGAGGAAGATATGACATGTAAAGAAGTTGCTTTT
ACAGCTCTGATAGCGGCTGAGGGTTTAAAATTACTTGAGATTAAAGAGAAAAACAAGGTG
ATTGCCGAGTTAGAGCTGAAATTGGGTGATAAACATCAGAAATTGGAACTCCTAAATAAA
TCCTTGTCTGATTCAAGACAGAAGGAGGGGCAGCTGGAAACATTGTTGCAAGAAAGTAAA
AAGGAATCGGAAGAGCTGAACACTCATTTTGGCAATGAACGGATGCACTTGGAGGCCCGA
ATTCAGGAGCTTGAGTCCCACAAAAATGATGCGCTTGAAGAAAATAAGAAACTCTTTGTT
GATAGGGAAGAATTACTAGTACAAATGCAAGGAATACATGAAAGAATGAGTGAATTATGC
TGTGAAGATTTGAACTTGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400059558
PEP Infomation

pacid=37477863 transcript=PGSC0003DMT400087883 locus=PGSC0003DMG400037454 ID=PGSC0003DMT400087883.v4.03 annot-version=v4.03
Sequence

MDKVYAELDVVKGEVEKLREECRTKTEMTESLRKAHIDQLSKLQEAKLEIGRQANELFVK
SEEIFEIKKLYDDIKSIVHEKETCLQNLSSAHENLQLDYGKKIGKLEVQNKDLVLALDEA
TSKIQDLEMQISASNNEINALKQIMSVRQEICVKSELKTRASKDLKDGDAIIQKLDEENR
IAKDQLKWKSEQFKHLEEAHKRNHDQFKTSKVEWGQEKSAMLEEISSLQARLDSQTRISE
DLQSQLRMSNQALAHQESRKRILEIEVSEFRSQFHDISLECQEASSKLENLTIKRDEEIG
ELRNLLRTKKALFKDTKCKSIQLEQENQDLRRSLKELQESQIQGTASTSVLKKLQSNFQH
LKQLHKKCSLNLKEKEAEWSSQIGKVAEDMKRCMSELKSKEKHIDELEKELEDRRDACDV
LTGELSVLILVLKSEFHTGSKELSRANTEQEPNSKSLVHQKNEQATVLEAELSEYKKMLE
ESSDCQVHLREQVLKLGNALKDASAASEEAKDDLAKARKEVKESKLELEKWKAEAGNLKD
YLEENQFSQKQEKEILLGILKEGEAKINELQQQITEAELKIVERTEAVNDLNQEKLQYYQ
IAEGKGNTIEILQTKISCLEQKLDDKDLQNEQIQSDVRKAFDQEKENLLLNLKEKDRKIQ
DILKQAKDLEEDMTCKEVAFTALIAAEGLKLLEIKEKNKVIAELELKLGDKHQKLELLNK
SLSDSRQKEGQLETLLQESKKESEELNTHFGNERMHLEARIQELESHKNDALEENKKLFV
DREELLVQMQGIHERMSELCCEDLNL*

Transcript Sequence

Transcript ID

PGSC0003DMT400087883
Transcript Infomation

pacid=37477863 locus=PGSC0003DMG400037454 ID=PGSC0003DMT400087883.v4.03 annot-version=v4.03
Sequence

ATGGACAAAGTTTATGCGGAGCTAGATGTTGTTAAAGGCGAGGTGGAAAAGCTCAGAGAA
GAATGCCGGACCAAAACAGAGATGACGGAGAGTTTGAGGAAAGCCCACATTGATCAATTA
TCAAAACTTCAAGAAGCTAAGTTGGAGATTGGTAGACAGGCAAATGAACTATTTGTTAAA
TCTGAGGAAATATTTGAGATCAAGAAACTCTACGATGATATCAAGTCCATTGTACATGAG
AAAGAAACATGTCTCCAGAATCTTAGCTCTGCTCATGAGAACCTGCAACTAGATTATGGG
AAGAAAATTGGGAAGTTGGAAGTACAAAACAAGGATTTGGTGTTGGCTCTGGATGAAGCA
ACATCCAAAATTCAAGATTTGGAAATGCAGATTTCTGCTAGTAATAATGAAATCAATGCT
CTTAAGCAAATCATGTCAGTTAGGCAGGAAATCTGTGTTAAATCAGAGCTAAAAACAAGG
GCATCCAAAGATCTGAAAGATGGAGATGCCATTATCCAAAAACTTGATGAAGAAAATAGG
ATTGCGAAAGATCAGTTGAAATGGAAGAGTGAACAATTTAAACACCTTGAAGAAGCTCAC
AAAAGAAACCATGATCAGTTCAAAACCAGTAAGGTGGAGTGGGGCCAGGAAAAGTCAGCA
ATGCTTGAAGAGATCTCTTCATTGCAAGCAAGATTGGATTCTCAGACTCGAATCTCAGAA
GACCTCCAAAGCCAATTGAGGATGAGTAACCAAGCTTTAGCTCATCAAGAAAGCAGAAAG
AGAATTCTGGAAATTGAAGTGTCTGAGTTTAGATCTCAATTCCATGATATCTCTTTAGAG
TGCCAAGAAGCAAGCTCAAAGCTTGAGAACTTGACCATCAAGAGGGATGAAGAAATTGGA
GAGTTAAGAAACTTACTCCGAACGAAAAAAGCACTGTTCAAGGATACAAAATGCAAAAGT
ATACAGCTTGAACAGGAAAATCAAGATTTACGAAGATCTCTCAAAGAGCTTCAAGAGTCT
CAAATCCAGGGTACTGCTTCCACTTCTGTACTTAAGAAACTGCAAAGCAATTTCCAGCAT
TTGAAGCAATTACACAAGAAATGTTCCTTAAACCTCAAAGAAAAGGAAGCTGAATGGAGC
TCACAGATAGGAAAAGTGGCAGAAGATATGAAAAGATGCATGTCTGAGTTAAAAAGTAAA
GAAAAACATATAGACGAGCTAGAAAAGGAGCTGGAAGATCGCCGTGATGCATGTGATGTT
CTTACTGGAGAGTTATCTGTCTTAATCTTGGTTTTAAAATCAGAATTTCATACTGGTAGC
AAGGAGCTCTCTAGAGCCAACACGGAACAAGAGCCAAATAGCAAAAGTCTAGTACATCAA
AAGAATGAACAAGCAACCGTTTTAGAGGCAGAACTGAGTGAGTACAAAAAGATGCTTGAA
GAGTCATCTGATTGCCAAGTTCACCTCAGGGAACAGGTCCTGAAATTGGGTAATGCTCTC
AAAGATGCTTCTGCTGCTTCAGAAGAAGCTAAAGATGACCTGGCCAAAGCAAGGAAAGAA
GTCAAAGAAAGCAAACTTGAACTAGAGAAGTGGAAAGCTGAAGCAGGAAATCTTAAAGAC
TACCTTGAAGAGAACCAATTTTCCCAAAAGCAAGAGAAGGAGATCTTACTTGGGATTTTG
AAGGAGGGAGAAGCCAAAATTAATGAGCTACAGCAACAGATTACAGAAGCAGAGTTGAAG
ATTGTTGAAAGAACAGAGGCAGTGAATGATTTAAATCAGGAGAAGCTTCAATACTATCAA
ATTGCAGAAGGCAAGGGTAACACCATAGAAATTCTTCAAACTAAGATTTCTTGCTTGGAG
CAAAAGTTGGATGATAAAGACCTTCAGAATGAGCAAATACAATCAGATGTGCGGAAGGCT
TTTGATCAGGAGAAGGAGAACCTCTTGCTGAATCTGAAAGAGAAAGACAGGAAAATACAA
GATATTCTCAAACAGGCCAAAGATTTAGAGGAAGATATGACATGTAAAGAAGTTGCTTTT
ACAGCTCTGATAGCGGCTGAGGGTTTAAAATTACTTGAGATTAAAGAGAAAAACAAGGTG
ATTGCCGAGTTAGAGCTGAAATTGGGTGATAAACATCAGAAATTGGAACTCCTAAATAAA
TCCTTGTCTGATTCAAGACAGAAGGAGGGGCAGCTGGAAACATTGTTGCAAGAAAGTAAA
AAGGAATCGGAAGAGCTGAACACTCATTTTGGCAATGAACGGATGCACTTGGAGGCCCGA
ATTCAGGAGCTTGAGTCCCACAAAAATGATGCGCTTGAAGAAAATAAGAAACTCTTTGTT
GATAGGGAAGAATTACTAGTACAAATGCAAGGAATACATGAAAGAATGAGTGAATTATGC
TGTGAAGATTTGAACTTGTAA