Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400087739
CDS Infomation

pacid=37471084 polypeptide=PGSC0003DMP400059414 locus=PGSC0003DMG400037310 ID=PGSC0003DMT400087739.v4.03 annot-version=v4.03
Sequence

ATGGAAAATAGCCATCAATTTTCCGACGATTTTCTGCCATTTTTGGAAGACAGTGTTATT
GATGCCGAACCAATTAGCTATTGTCTTCCTCATCAGTACTCGTCTTCTAATACTACTTTG
TCTCTCTTTCCCCAAGTTTCTCAAAATCTTGCTGCTTCGAAACCAATTACTACTACTGTT
GATTTCTCTTCCATAGACGGCGGCAAGGACCATCCTAATTCACCTTTTTTGACTCTCTTT
ACACGAGTTTATGTAAACACTACTCCTCCTCCGTCATCCACTGATCTCTGTCTTTCTCTA
CCATCCCTACCCAACACCTCTTCGACTGCCCAATCTTCCATTAGTAGTCAACATTGTTGT
AGTTTTGCTTCATCAAGTCGGGAGGTAAATGCATTGGGTAACTCTGCTCCTAAAAGATCA
TTGGGGGAACATAAATTCATCCCCCGCAAGAAAACCAAGCTGACAGAAGAATCAAATGGA
GAAGGTCACTGGATAACAAAAAAGTTAACTAGAAGCGATGTGAATGGAGCTTCAAGGCTA
TTACTATCTCGACAAGACGTGAATAATTACATATTACCCTTTATGAATGAGGAAGAACAG
AGCATAATTTGCCAACAATTGTGTGGAGTTGATGTTACCGTATATGATATGGATACACAA
ACAAGCCATATTTTGACTCTAAAAAAATGGTCAACTAATAGCTTTCACCTTGTCAAAGCA
TGGACAAAGGATTTTGTCAAAAGGAGGAATCTCAAAGAAAATGACGTAATCTCAATATGT
TGGGAGAAAACCAATTCAAGATTTTGTTTTCGAGTTCAAATGAGGAATCAAGTAGAACTT
TAA

Peptide Sequence

PEP ID

PGSC0003DMP400059414
PEP Infomation

pacid=37471084 transcript=PGSC0003DMT400087739 locus=PGSC0003DMG400037310 ID=PGSC0003DMT400087739.v4.03 annot-version=v4.03
Sequence

MENSHQFSDDFLPFLEDSVIDAEPISYCLPHQYSSSNTTLSLFPQVSQNLAASKPITTTV
DFSSIDGGKDHPNSPFLTLFTRVYVNTTPPPSSTDLCLSLPSLPNTSSTAQSSISSQHCC
SFASSSREVNALGNSAPKRSLGEHKFIPRKKTKLTEESNGEGHWITKKLTRSDVNGASRL
LLSRQDVNNYILPFMNEEEQSIICQQLCGVDVTVYDMDTQTSHILTLKKWSTNSFHLVKA
WTKDFVKRRNLKENDVISICWEKTNSRFCFRVQMRNQVEL*

Transcript Sequence

Transcript ID

PGSC0003DMT400087739
Transcript Infomation

pacid=37471084 locus=PGSC0003DMG400037310 ID=PGSC0003DMT400087739.v4.03 annot-version=v4.03
Sequence

ATGGAAAATAGCCATCAATTTTCCGACGATTTTCTGCCATTTTTGGAAGACAGTGTTATT
GATGCCGAACCAATTAGCTATTGTCTTCCTCATCAGTACTCGTCTTCTAATACTACTTTG
TCTCTCTTTCCCCAAGTTTCTCAAAATCTTGCTGCTTCGAAACCAATTACTACTACTGTT
GATTTCTCTTCCATAGACGGCGGCAAGGACCATCCTAATTCACCTTTTTTGACTCTCTTT
ACACGAGTTTATGTAAACACTACTCCTCCTCCGTCATCCACTGATCTCTGTCTTTCTCTA
CCATCCCTACCCAACACCTCTTCGACTGCCCAATCTTCCATTAGTAGTCAACATTGTTGT
AGTTTTGCTTCATCAAGTCGGGAGGTAAATGCATTGGGTAACTCTGCTCCTAAAAGATCA
TTGGGGGAACATAAATTCATCCCCCGCAAGAAAACCAAGCTGACAGAAGAATCAAATGGA
GAAGGTCACTGGATAACAAAAAAGTTAACTAGAAGCGATGTGAATGGAGCTTCAAGGCTA
TTACTATCTCGACAAGACGTGAATAATTACATATTACCCTTTATGAATGAGGAAGAACAG
AGCATAATTTGCCAACAATTGTGTGGAGTTGATGTTACCGTATATGATATGGATACACAA
ACAAGCCATATTTTGACTCTAAAAAAATGGTCAACTAATAGCTTTCACCTTGTCAAAGCA
TGGACAAAGGATTTTGTCAAAAGGAGGAATCTCAAAGAAAATGACGTAATCTCAATATGT
TGGGAGAAAACCAATTCAAGATTTTGTTTTCGAGTTCAAATGAGGAATCAAGTAGAACTT
TAA