Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400087567
CDS Infomation

pacid=37425724 polypeptide=PGSC0003DMP400059242 locus=PGSC0003DMG400037138 ID=PGSC0003DMT400087567.v4.03 annot-version=v4.03
Sequence

ATGTCAACGGCTAGGACAGACTGGCTGAATCCGATAGGCAATAGGTTAGCTATACCTGGA
AGAAGGGGCAGATGGAAATTAATAAGTAGAAGGAATTTTGCTGTTAATAGAACTGTTGCT
ACTGGTACTTCGGTTATGACCCCTTCTGTTGTTGCTGAATCCTCTCAAGGCTTGCAGCAA
TTACCATTTAAACCGGAGGGATACAACTATTGGAAATGGCGAAGCTACAGAATTCATTAT
GTGGAGAAAGGGGAAGGGTTTCCAATAGTTTTGATTCATGGATTTGCTTCTTCTTCTTTT
CATTGGAGGTACAACATACCAGAACTGGCTAAAAGATACAAGGTTTATGCTCTGGATTTG
CTAGGATTTGGCTGGAGTGAAAAGGCACTAATAGACTATGACGCCTTGATTTGGAGAGAT
CAGGTTGTCGACTTCTTAAAGAAGATAGTTAAACAACCCGCTGTTTTAGTTGGAAACAGT
CTTGGAGGGTTTACTACTTTGTTAGCAGCAGCAGCACTGCCAGATCAAGTCAGGGGAGTT
TCCTTATTAAATAGTGCAGGACGATTTGGGGATGACATTAGTACAACTGACAAAACTGAA
GACACAGCCTTACATAAGTTCATTGTAAAGCCAGTGGAGGAAATCTTTCAACGTGTTGTT
GTCAGATCAGCTTTCTGGATAACCATGCGACCAGATCAAATTGAAGCTGTACTGAAGAGT
GGTGTCTACAGAAACCATTCAAATGTGGATGATTACCTCATCAATTCAATTTTAAGGCCT
GCAGCTGACCCAAATGCCTATGAAGTTTATTACCGACTATTAAAACAACTCATGTCAAAC
CCAACAAAGTATACACTTGACAGTGTTTTGAGCCAACTCTCTTGCCCATTGTTGTTGTTG
TGGGGGGACCTAGACCCTTGGGTTCATGATCGTGCAAAGCCAAATCAAATTAAGGATTTC
TACCCGAACACATCCCTTGTAAACTTTCAGGCAGGGCATTACCCCCAGGATGAAGTTCCA
GAACAAGTGAATAAAGCTTTATTAGATTGGTTATCAACCTTGGCATCAGAAATTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400059242
PEP Infomation

pacid=37425724 transcript=PGSC0003DMT400087567 locus=PGSC0003DMG400037138 ID=PGSC0003DMT400087567.v4.03 annot-version=v4.03
Sequence

MSTARTDWLNPIGNRLAIPGRRGRWKLISRRNFAVNRTVATGTSVMTPSVVAESSQGLQQ
LPFKPEGYNYWKWRSYRIHYVEKGEGFPIVLIHGFASSSFHWRYNIPELAKRYKVYALDL
LGFGWSEKALIDYDALIWRDQVVDFLKKIVKQPAVLVGNSLGGFTTLLAAAALPDQVRGV
SLLNSAGRFGDDISTTDKTEDTALHKFIVKPVEEIFQRVVVRSAFWITMRPDQIEAVLKS
GVYRNHSNVDDYLINSILRPAADPNAYEVYYRLLKQLMSNPTKYTLDSVLSQLSCPLLLL
WGDLDPWVHDRAKPNQIKDFYPNTSLVNFQAGHYPQDEVPEQVNKALLDWLSTLASEI*

Transcript Sequence

Transcript ID

PGSC0003DMT400087567
Transcript Infomation

pacid=37425724 locus=PGSC0003DMG400037138 ID=PGSC0003DMT400087567.v4.03 annot-version=v4.03
Sequence

ATGTCAACGGCTAGGACAGACTGGCTGAATCCGATAGGCAATAGGTTAGCTATACCTGGA
AGAAGGGGCAGATGGAAATTAATAAGTAGAAGGAATTTTGCTGTTAATAGAACTGTTGCT
ACTGGTACTTCGGTTATGACCCCTTCTGTTGTTGCTGAATCCTCTCAAGGCTTGCAGCAA
TTACCATTTAAACCGGAGGGATACAACTATTGGAAATGGCGAAGCTACAGAATTCATTAT
GTGGAGAAAGGGGAAGGGTTTCCAATAGTTTTGATTCATGGATTTGCTTCTTCTTCTTTT
CATTGGAGGTACAACATACCAGAACTGGCTAAAAGATACAAGGTTTATGCTCTGGATTTG
CTAGGATTTGGCTGGAGTGAAAAGGCACTAATAGACTATGACGCCTTGATTTGGAGAGAT
CAGGTTGTCGACTTCTTAAAGAAGATAGTTAAACAACCCGCTGTTTTAGTTGGAAACAGT
CTTGGAGGGTTTACTACTTTGTTAGCAGCAGCAGCACTGCCAGATCAAGTCAGGGGAGTT
TCCTTATTAAATAGTGCAGGACGATTTGGGGATGACATTAGTACAACTGACAAAACTGAA
GACACAGCCTTACATAAGTTCATTGTAAAGCCAGTGGAGGAAATCTTTCAACGTGTTGTT
GTCAGATCAGCTTTCTGGATAACCATGCGACCAGATCAAATTGAAGCTGTACTGAAGAGT
GGTGTCTACAGAAACCATTCAAATGTGGATGATTACCTCATCAATTCAATTTTAAGGCCT
GCAGCTGACCCAAATGCCTATGAAGTTTATTACCGACTATTAAAACAACTCATGTCAAAC
CCAACAAAGTATACACTTGACAGTGTTTTGAGCCAACTCTCTTGCCCATTGTTGTTGTTG
TGGGGGGACCTAGACCCTTGGGTTCATGATCGTGCAAAGCCAAATCAAATTAAGGATTTC
TACCCGAACACATCCCTTGTAAACTTTCAGGCAGGGCATTACCCCCAGGATGAAGTTCCA
GAACAAGTGAATAAAGCTTTATTAGATTGGTTATCAACCTTGGCATCAGAAATTTAG