Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400087395
CDS Infomation

pacid=37459003 polypeptide=PGSC0003DMP400059070 locus=PGSC0003DMG400036966 ID=PGSC0003DMT400087395.v4.03 annot-version=v4.03
Sequence

ATGGTGAAGATCTGTTGCATTGGAGCTGGATATGTTGGTGGACCAACTATGGCAGTCATT
GCCCTCAAATGCCCCTCAATTGAAGTGGCTGTTGTTGATATCTCTGTTGCCCGAATCACA
GCTTGGAATAGCGATGAGTTGCCTATCTATGAGCCTGGACTTGATGATGTGGTGAAGCAA
TGCAGAGGAAAGAACCTTTTCTTCTGCACTGAAGTAGAGAAACATGTCTCTGAAGCAGAC
ATCATCTTTGTGTCGGTTAACACCCCAACAAAGACTCGAGGACTTGGAGCTGGAAAAGCT
GCAGACCTTACATACTGGGAGAGTGCTGCTCGAATGATAGCTGATGTATCCAAGAGTGAT
AAGATTGTTGTGGAGAAATCAACTGTTCCGGTTAAAACAGCTGAGGCAATCGAGAAGATC
CTCACTCATAACAGTAAGGGAATTAACTATCAGATCCTTTCGAATCCAGAATTTCTTGCT
GAGGGAACTGCAATTCAGGATCTTTTTCATCCAGACCGCGTTCTAATTGGAGGAAGAGAC
ACCCCTGAAGGGCAAAAGGCAATCCAGACCCTAAAAAAAGTTTATGCGCATTGGGTGCCT
GAAGACAGAATCATCTGCACCAATCTCTGGTCAGCAGAGCTCTCGAAGCTCGCTGCCAAT
GCCTTCTTGGCTCAGAGGATTTCATCAGTTAACGCTATGTCAGCCCTTTGTGAAGCTACT
GGGGCTGATGTTACACAGGTGTCCAATGCTGTTGGTAAGGACAGCCGAATTGGACCCAAA
TTCCTCAATGCCAGTGTTGGTTTTGGTGGTTCTTGTTTCCAGAAGGATATCCTCAACTTG
GTTTACATATGTGAATGCAATGGCCTCCCAGAAGTTGCCAGTTACTGGAAGCAGGTGATC
AAGGTGAATGACTATCAAAAGAGTCGTTTTGTTAACCGTATGGTCTCCTCCATGTTTAAC
ACAGTTTCTGGTAAGAAAATTGCCATTCTTGGATTTGCCTTCAAAAAAGACACAGGTGAC
ACTAGGGAAACTCCTGCAATTGATGTCTGCAAAGGCTTGTTGGGAGACAATGCTCACTTG
AGCATATATGATCCACAGGTCACTCAGGAACAAATACAAAGGGATCTTTCCATGGAAAAG
TTCGACTGGGACCATCCAACTCACCTCCAGCCAATGAGTCCTTATGGAGTGAAGCAAGTT
AACGTGGTGTCGGATGCTCACGAGGCAACAAAAGACGCCCACGGTCTCTGCATTCTCACT
GAGTGGGATGAGTTCAAAACACTTGATTTCAAGAGGATTTATGATAACATGCAAAAACCT
GCATTTGTGTTTGATGGGAGGAACGTTGTTGACGCATCAAAGCTCAGAGAAATCGGGTTT
ATCGTTTACTCCATTGGTAAACCTTTGGATGCATGGCTCAAGGATATGCCAGCAGTGGCA
TAA

Peptide Sequence

PEP ID

PGSC0003DMP400059070
PEP Infomation

pacid=37459003 transcript=PGSC0003DMT400087395 locus=PGSC0003DMG400036966 ID=PGSC0003DMT400087395.v4.03 annot-version=v4.03
Sequence

MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVARITAWNSDELPIYEPGLDDVVKQ
CRGKNLFFCTEVEKHVSEADIIFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKSD
KIVVEKSTVPVKTAEAIEKILTHNSKGINYQILSNPEFLAEGTAIQDLFHPDRVLIGGRD
TPEGQKAIQTLKKVYAHWVPEDRIICTNLWSAELSKLAANAFLAQRISSVNAMSALCEAT
GADVTQVSNAVGKDSRIGPKFLNASVGFGGSCFQKDILNLVYICECNGLPEVASYWKQVI
KVNDYQKSRFVNRMVSSMFNTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDNAHL
SIYDPQVTQEQIQRDLSMEKFDWDHPTHLQPMSPYGVKQVNVVSDAHEATKDAHGLCILT
EWDEFKTLDFKRIYDNMQKPAFVFDGRNVVDASKLREIGFIVYSIGKPLDAWLKDMPAVA
*

Transcript Sequence

Transcript ID

PGSC0003DMT400087395
Transcript Infomation

pacid=37459003 locus=PGSC0003DMG400036966 ID=PGSC0003DMT400087395.v4.03 annot-version=v4.03
Sequence

ATGGTGAAGATCTGTTGCATTGGAGCTGGATATGTTGGTGGACCAACTATGGCAGTCATT
GCCCTCAAATGCCCCTCAATTGAAGTGGCTGTTGTTGATATCTCTGTTGCCCGAATCACA
GCTTGGAATAGCGATGAGTTGCCTATCTATGAGCCTGGACTTGATGATGTGGTGAAGCAA
TGCAGAGGAAAGAACCTTTTCTTCTGCACTGAAGTAGAGAAACATGTCTCTGAAGCAGAC
ATCATCTTTGTGTCGGTTAACACCCCAACAAAGACTCGAGGACTTGGAGCTGGAAAAGCT
GCAGACCTTACATACTGGGAGAGTGCTGCTCGAATGATAGCTGATGTATCCAAGAGTGAT
AAGATTGTTGTGGAGAAATCAACTGTTCCGGTTAAAACAGCTGAGGCAATCGAGAAGATC
CTCACTCATAACAGTAAGGGAATTAACTATCAGATCCTTTCGAATCCAGAATTTCTTGCT
GAGGGAACTGCAATTCAGGATCTTTTTCATCCAGACCGCGTTCTAATTGGAGGAAGAGAC
ACCCCTGAAGGGCAAAAGGCAATCCAGACCCTAAAAAAAGTTTATGCGCATTGGGTGCCT
GAAGACAGAATCATCTGCACCAATCTCTGGTCAGCAGAGCTCTCGAAGCTCGCTGCCAAT
GCCTTCTTGGCTCAGAGGATTTCATCAGTTAACGCTATGTCAGCCCTTTGTGAAGCTACT
GGGGCTGATGTTACACAGGTGTCCAATGCTGTTGGTAAGGACAGCCGAATTGGACCCAAA
TTCCTCAATGCCAGTGTTGGTTTTGGTGGTTCTTGTTTCCAGAAGGATATCCTCAACTTG
GTTTACATATGTGAATGCAATGGCCTCCCAGAAGTTGCCAGTTACTGGAAGCAGGTGATC
AAGGTGAATGACTATCAAAAGAGTCGTTTTGTTAACCGTATGGTCTCCTCCATGTTTAAC
ACAGTTTCTGGTAAGAAAATTGCCATTCTTGGATTTGCCTTCAAAAAAGACACAGGTGAC
ACTAGGGAAACTCCTGCAATTGATGTCTGCAAAGGCTTGTTGGGAGACAATGCTCACTTG
AGCATATATGATCCACAGGTCACTCAGGAACAAATACAAAGGGATCTTTCCATGGAAAAG
TTCGACTGGGACCATCCAACTCACCTCCAGCCAATGAGTCCTTATGGAGTGAAGCAAGTT
AACGTGGTGTCGGATGCTCACGAGGCAACAAAAGACGCCCACGGTCTCTGCATTCTCACT
GAGTGGGATGAGTTCAAAACACTTGATTTCAAGAGGATTTATGATAACATGCAAAAACCT
GCATTTGTGTTTGATGGGAGGAACGTTGTTGACGCATCAAAGCTCAGAGAAATCGGGTTT
ATCGTTTACTCCATTGGTAAACCTTTGGATGCATGGCTCAAGGATATGCCAGCAGTGGCA
TAA