Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400087204
CDS Infomation

pacid=37438672 polypeptide=PGSC0003DMP400058879 locus=PGSC0003DMG400036775 ID=PGSC0003DMT400087204.v4.03 annot-version=v4.03
Sequence

ATGTCTAACCAAAAGAAAAACCAAAACCAAAATCCAAGTAAAAACCAAAATGCAAACCAA
AACCAGAACAAAAACCAATATCTAAATCAAAACCATAATTCATATCCATTAGAAAATGAG
GATTTTAATCTAAAGGAGACAAAACCAACTCTTGGTGGTGGAAGAGTTACTGCAAATGAC
AGACTTGGCACAGCATTTGATCTTGTTGAGCAAATGCATTACTTATATGTAAGGGTAGTC
AAGGCAAAGGACATACCTTTTAAAAAAGATGGCAATAGCAATCCTCATCCTTTTGTTGAA
GTGCAACTTGGGAATTTAAAGGGTCTAACTTTTCACTTTGAACACAAGTCTAGTCCTGAG
TGGAGCCAAGTGTTTGTCGTGTTGAAGGACCGGATTCAATCAAGAGTTCTTGAAGTTTGC
TTGAAGGATAAATCAAGAATTGGTGATAGTGATGATGCTTTGATTGGAAAAGTAAATTTT
GAGATCAATGAGGTTCCGAAAAGGGTACCTCCAGATAGTCCTTTGGCACCTCAATGGTAC
TGGATGGAGAATAGGAAAGGGGAAAAAGTGAAAGGAGAGTTGATGTTGGCTGTTTGGATA
GGGACACAAGCTGATGAGGCATTTCAAGAAGCTTTACATCTAGATGCCACAGCAGTGAAT
GGTGACGGTGTTGCGAATATAAAATCTAAGGTTTATTTATCACCTAGACTTTGGTATCTG
AGAGTTAATGTGATAGAAGCTCAAGAATTGCAGATAGGCAACAAGAACAGGCTGCAACCG
GAGATTTACGCGAGGATTACACTAGGAAATGTGGTTTTAAGGACTAAGAATTCTTTGAGT
AAGAATGTTTGCCCATCATGGAATGAAGATTTGATGTTTGTAGTTGCAGAACCTTTTGAG
GATCAGTTGGTTTTGAGTGTGGAAGATAAGGTGGCACCAAACAAGGATGAATTGCTGGGG
AAGTGTGTCATATCTTTACAAGATGTAGAAAAAAGGGTTGATTTTAGTACTCCAATTAGT
AAGTGGTATGGTCTTGAGAAGGAGGTTGTGTCTGAGGGTGGCAACAGCAAAGTTTCTAAA
CTAAACAGCAAGGTTCATTTGAGGTTATCTTTTGATGGTGGATATCATGTTCTTGATGAA
TTAACACATTATAGTAGTGATCTCAAGGCAACATCCAAGGAGTTGTGGAAACCAAGTATT
GGGGTTTTAGAACTTGGAATCTTGAATGCTCAAGGTTTATCACCAATGAAGAACAGAGAT
GGCCGCGGAATAACAGATCCTTATTGTGTGGCGAAATATGGTCAGAAATGGATTAGGACA
AGAACAATTATCAACAGTTTCAATCCCAATTGGAATGAACAATACACTTGGGAGGTGTTT
GATCCTTGCACCGTGATCACGATAGGAGTGTTTGATAATTGTCATTTGCAAGGTGAAGAT
AAAAATGACAAAGCCAAGGATTCAAAAATTGGGAAGGTAAGGATTAGACTCTCCACACTT
GAGACTAATAGAGTTTACACTCATTCATATCCTCTCATAGTGTTGACACCAGCAGGGGTG
AAGAAGATGGGTGAAATTCAACTGGCTGTGAGATTTTCTTGTTCATCTTTATTCAACATG
TTGGCTATGTACTCTCAACCCTTATTACCAACTCTTCATTACCTTCATCCGCTGACTTAT
TACCAGATCGATAACCTAAGGCACCAGGCTACACAAATTGTTGCCACGAGGCTAAGTCGT
GCAGAGCCACCATTGAGAAGAGAATTGGTGGAGTACATGCTTGATGTGGGCTCAAACACG
TGGAGCATAAGAAGATGCAAAGCCAACTATGTTAGAATAGCTGGGATCCTAACAGGCCTA
ATTGCAATTTGCAAATGGTTCAATGGGATTTGCACTTGGAAGAACCCTTTCACAACTGTG
CTAGTGCACATCATATTCTTCCTATTCGTGTGCTTCCCGAGGCTGATCTTAAGCAGCATG
TTCGTCGTTGTTTTCTTCATTGGTACATGGAACTACAGAATGAGGCCTAGAAAGCCACCA
CATATGGACATCAAGTTGTCACAAGCTGAAAGAGTACCTTGGGATGAATTGGATGAGGAG
TTTGACACTTTCCCAACGTCTCGAAACAATGATGCTGTGAGAATGAGGTATGACAGATTA
AGAAGCATTGGATCAAGAATGCAAGCTGTTGCAGGGGATTTAGCTAATCAAGGGGAAAGA
TTCTATAACTTGTTAACTTGGAGAGATCCAAGAGCTACTGCTCTATTTCTTATCTTCTGT
TTGGTTGCATCAGTAGTGTTATATGTCACTCCTTTTACAGTTTTAGTGAGTCTTATGGGA
TTCTATACAATGAGGCATCCAAAATTCAGAGAGAAACTCCCTTCTGTGCCCTTAAGTTTC
TTCAGAAGACTGCCTGCAAAAACAGACAGCTTGTTGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400058879
PEP Infomation

pacid=37438672 transcript=PGSC0003DMT400087204 locus=PGSC0003DMG400036775 ID=PGSC0003DMT400087204.v4.03 annot-version=v4.03
Sequence

MSNQKKNQNQNPSKNQNANQNQNKNQYLNQNHNSYPLENEDFNLKETKPTLGGGRVTAND
RLGTAFDLVEQMHYLYVRVVKAKDIPFKKDGNSNPHPFVEVQLGNLKGLTFHFEHKSSPE
WSQVFVVLKDRIQSRVLEVCLKDKSRIGDSDDALIGKVNFEINEVPKRVPPDSPLAPQWY
WMENRKGEKVKGELMLAVWIGTQADEAFQEALHLDATAVNGDGVANIKSKVYLSPRLWYL
RVNVIEAQELQIGNKNRLQPEIYARITLGNVVLRTKNSLSKNVCPSWNEDLMFVVAEPFE
DQLVLSVEDKVAPNKDELLGKCVISLQDVEKRVDFSTPISKWYGLEKEVVSEGGNSKVSK
LNSKVHLRLSFDGGYHVLDELTHYSSDLKATSKELWKPSIGVLELGILNAQGLSPMKNRD
GRGITDPYCVAKYGQKWIRTRTIINSFNPNWNEQYTWEVFDPCTVITIGVFDNCHLQGED
KNDKAKDSKIGKVRIRLSTLETNRVYTHSYPLIVLTPAGVKKMGEIQLAVRFSCSSLFNM
LAMYSQPLLPTLHYLHPLTYYQIDNLRHQATQIVATRLSRAEPPLRRELVEYMLDVGSNT
WSIRRCKANYVRIAGILTGLIAICKWFNGICTWKNPFTTVLVHIIFFLFVCFPRLILSSM
FVVVFFIGTWNYRMRPRKPPHMDIKLSQAERVPWDELDEEFDTFPTSRNNDAVRMRYDRL
RSIGSRMQAVAGDLANQGERFYNLLTWRDPRATALFLIFCLVASVVLYVTPFTVLVSLMG
FYTMRHPKFREKLPSVPLSFFRRLPAKTDSLL*

Transcript Sequence

Transcript ID

PGSC0003DMT400087204
Transcript Infomation

pacid=37438672 locus=PGSC0003DMG400036775 ID=PGSC0003DMT400087204.v4.03 annot-version=v4.03
Sequence

ATGTCTAACCAAAAGAAAAACCAAAACCAAAATCCAAGTAAAAACCAAAATGCAAACCAA
AACCAGAACAAAAACCAATATCTAAATCAAAACCATAATTCATATCCATTAGAAAATGAG
GATTTTAATCTAAAGGAGACAAAACCAACTCTTGGTGGTGGAAGAGTTACTGCAAATGAC
AGACTTGGCACAGCATTTGATCTTGTTGAGCAAATGCATTACTTATATGTAAGGGTAGTC
AAGGCAAAGGACATACCTTTTAAAAAAGATGGCAATAGCAATCCTCATCCTTTTGTTGAA
GTGCAACTTGGGAATTTAAAGGGTCTAACTTTTCACTTTGAACACAAGTCTAGTCCTGAG
TGGAGCCAAGTGTTTGTCGTGTTGAAGGACCGGATTCAATCAAGAGTTCTTGAAGTTTGC
TTGAAGGATAAATCAAGAATTGGTGATAGTGATGATGCTTTGATTGGAAAAGTAAATTTT
GAGATCAATGAGGTTCCGAAAAGGGTACCTCCAGATAGTCCTTTGGCACCTCAATGGTAC
TGGATGGAGAATAGGAAAGGGGAAAAAGTGAAAGGAGAGTTGATGTTGGCTGTTTGGATA
GGGACACAAGCTGATGAGGCATTTCAAGAAGCTTTACATCTAGATGCCACAGCAGTGAAT
GGTGACGGTGTTGCGAATATAAAATCTAAGGTTTATTTATCACCTAGACTTTGGTATCTG
AGAGTTAATGTGATAGAAGCTCAAGAATTGCAGATAGGCAACAAGAACAGGCTGCAACCG
GAGATTTACGCGAGGATTACACTAGGAAATGTGGTTTTAAGGACTAAGAATTCTTTGAGT
AAGAATGTTTGCCCATCATGGAATGAAGATTTGATGTTTGTAGTTGCAGAACCTTTTGAG
GATCAGTTGGTTTTGAGTGTGGAAGATAAGGTGGCACCAAACAAGGATGAATTGCTGGGG
AAGTGTGTCATATCTTTACAAGATGTAGAAAAAAGGGTTGATTTTAGTACTCCAATTAGT
AAGTGGTATGGTCTTGAGAAGGAGGTTGTGTCTGAGGGTGGCAACAGCAAAGTTTCTAAA
CTAAACAGCAAGGTTCATTTGAGGTTATCTTTTGATGGTGGATATCATGTTCTTGATGAA
TTAACACATTATAGTAGTGATCTCAAGGCAACATCCAAGGAGTTGTGGAAACCAAGTATT
GGGGTTTTAGAACTTGGAATCTTGAATGCTCAAGGTTTATCACCAATGAAGAACAGAGAT
GGCCGCGGAATAACAGATCCTTATTGTGTGGCGAAATATGGTCAGAAATGGATTAGGACA
AGAACAATTATCAACAGTTTCAATCCCAATTGGAATGAACAATACACTTGGGAGGTGTTT
GATCCTTGCACCGTGATCACGATAGGAGTGTTTGATAATTGTCATTTGCAAGGTGAAGAT
AAAAATGACAAAGCCAAGGATTCAAAAATTGGGAAGGTAAGGATTAGACTCTCCACACTT
GAGACTAATAGAGTTTACACTCATTCATATCCTCTCATAGTGTTGACACCAGCAGGGGTG
AAGAAGATGGGTGAAATTCAACTGGCTGTGAGATTTTCTTGTTCATCTTTATTCAACATG
TTGGCTATGTACTCTCAACCCTTATTACCAACTCTTCATTACCTTCATCCGCTGACTTAT
TACCAGATCGATAACCTAAGGCACCAGGCTACACAAATTGTTGCCACGAGGCTAAGTCGT
GCAGAGCCACCATTGAGAAGAGAATTGGTGGAGTACATGCTTGATGTGGGCTCAAACACG
TGGAGCATAAGAAGATGCAAAGCCAACTATGTTAGAATAGCTGGGATCCTAACAGGCCTA
ATTGCAATTTGCAAATGGTTCAATGGGATTTGCACTTGGAAGAACCCTTTCACAACTGTG
CTAGTGCACATCATATTCTTCCTATTCGTGTGCTTCCCGAGGCTGATCTTAAGCAGCATG
TTCGTCGTTGTTTTCTTCATTGGTACATGGAACTACAGAATGAGGCCTAGAAAGCCACCA
CATATGGACATCAAGTTGTCACAAGCTGAAAGAGTACCTTGGGATGAATTGGATGAGGAG
TTTGACACTTTCCCAACGTCTCGAAACAATGATGCTGTGAGAATGAGGTATGACAGATTA
AGAAGCATTGGATCAAGAATGCAAGCTGTTGCAGGGGATTTAGCTAATCAAGGGGAAAGA
TTCTATAACTTGTTAACTTGGAGAGATCCAAGAGCTACTGCTCTATTTCTTATCTTCTGT
TTGGTTGCATCAGTAGTGTTATATGTCACTCCTTTTACAGTTTTAGTGAGTCTTATGGGA
TTCTATACAATGAGGCATCCAAAATTCAGAGAGAAACTCCCTTCTGTGCCCTTAAGTTTC
TTCAGAAGACTGCCTGCAAAAACAGACAGCTTGTTGTGA