Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400087082
CDS Infomation

pacid=37429984 polypeptide=PGSC0003DMP400058757 locus=PGSC0003DMG400036653 ID=PGSC0003DMT400087082.v4.03 annot-version=v4.03
Sequence

ATGAATCCATCAATTCCTGAAGAAATAGTCATTCAAATATTCACATGGCTTCCTGTCAAA
TCACTAATGCGTTTCAAGTGCGTTACTAAATTCTTTAATTCTCTTGTTTCTGAATCATAT
TTTACGGATACCCACACATCTCACTCTATGATCCGTCAGGGTGGAACAAAATACTTCTTG
GGTGGAAGGGGATTTTATTGCACAGCTGATCAGCAAAAGGAAGACGGAAAAACCTCTGCT
TCCAACCTTGTTCAAATTCGGAGTTTTGATGAATTCCCCTTCTATATCCCTGTAGGTTCT
GATGTCAGTTGTGTTAACGGTTTATTTTGCATTCAGAAACCTGCTGCAATTTTAAACCCC
AGTACAGGAGAAGTAAGATATCTCCCCAAACTAAATGATGATCGGTCTCTCCTTTACTAT
TGGTTAGGTTTTGAGCCAGAAGAAAACAAGTATAAAATTCTTTTGACACAAGATGGTAGC
GGATTGTACATAAAACAGTGTGTTTTCACATTAGGCGTAGACAAATCATGGAGAAAGACT
CAAAGGATTCCCAGATCTGTTATGTACAAGCCCGGGGTTTGCATCAATGGAGTTATCTAT
AGGTTTGTTTACCATGGAGAAACACTTGCTATAGATGCATTTGATCTTAAAACAGAAAGT
TTCAAACTTATTGTATTGAAGAATTCATCTAAGTGGTGGTATTACGAGTTGATAGAGGTG
AAGGGCCACATTGTTGAACGTGAGGCGAATTCAACGTCAGGGATATCAGTGAGTAATGAA
CGCAAGCTGAAATTTTCGGAGTTGAAAACGAAAAGGAACCACAGATATATAGTGTTCAAG
ATTGATAATTCAATGCATCAAGTTGTGGTTGAGAAAGTTGGGAGACATGGTGAGACTCGT
GAAGATTTCTCTGTTTATCAATGGACTCTGTTTCTCATTCTCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400058757
PEP Infomation

pacid=37429984 transcript=PGSC0003DMT400087082 locus=PGSC0003DMG400036653 ID=PGSC0003DMT400087082.v4.03 annot-version=v4.03
Sequence

MNPSIPEEIVIQIFTWLPVKSLMRFKCVTKFFNSLVSESYFTDTHTSHSMIRQGGTKYFL
GGRGFYCTADQQKEDGKTSASNLVQIRSFDEFPFYIPVGSDVSCVNGLFCIQKPAAILNP
STGEVRYLPKLNDDRSLLYYWLGFEPEENKYKILLTQDGSGLYIKQCVFTLGVDKSWRKT
QRIPRSVMYKPGVCINGVIYRFVYHGETLAIDAFDLKTESFKLIVLKNSSKWWYYELIEV
KGHIVEREANSTSGISVSNERKLKFSELKTKRNHRYIVFKIDNSMHQVVVEKVGRHGETR
EDFSVYQWTLFLIL*

Transcript Sequence

Transcript ID

PGSC0003DMT400087082
Transcript Infomation

pacid=37429984 locus=PGSC0003DMG400036653 ID=PGSC0003DMT400087082.v4.03 annot-version=v4.03
Sequence

ATGAATCCATCAATTCCTGAAGAAATAGTCATTCAAATATTCACATGGCTTCCTGTCAAA
TCACTAATGCGTTTCAAGTGCGTTACTAAATTCTTTAATTCTCTTGTTTCTGAATCATAT
TTTACGGATACCCACACATCTCACTCTATGATCCGTCAGGGTGGAACAAAATACTTCTTG
GGTGGAAGGGGATTTTATTGCACAGCTGATCAGCAAAAGGAAGACGGAAAAACCTCTGCT
TCCAACCTTGTTCAAATTCGGAGTTTTGATGAATTCCCCTTCTATATCCCTGTAGGTTCT
GATGTCAGTTGTGTTAACGGTTTATTTTGCATTCAGAAACCTGCTGCAATTTTAAACCCC
AGTACAGGAGAAGTAAGATATCTCCCCAAACTAAATGATGATCGGTCTCTCCTTTACTAT
TGGTTAGGTTTTGAGCCAGAAGAAAACAAGTATAAAATTCTTTTGACACAAGATGGTAGC
GGATTGTACATAAAACAGTGTGTTTTCACATTAGGCGTAGACAAATCATGGAGAAAGACT
CAAAGGATTCCCAGATCTGTTATGTACAAGCCCGGGGTTTGCATCAATGGAGTTATCTAT
AGGTTTGTTTACCATGGAGAAACACTTGCTATAGATGCATTTGATCTTAAAACAGAAAGT
TTCAAACTTATTGTATTGAAGAATTCATCTAAGTGGTGGTATTACGAGTTGATAGAGGTG
AAGGGCCACATTGTTGAACGTGAGGCGAATTCAACGTCAGGGATATCAGTGAGTAATGAA
CGCAAGCTGAAATTTTCGGAGTTGAAAACGAAAAGGAACCACAGATATATAGTGTTCAAG
ATTGATAATTCAATGCATCAAGTTGTGGTTGAGAAAGTTGGGAGACATGGTGAGACTCGT
GAAGATTTCTCTGTTTATCAATGGACTCTGTTTCTCATTCTCTAA