Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400086265
CDS Infomation

pacid=37453122 polypeptide=PGSC0003DMP400057940 locus=PGSC0003DMG400035836 ID=PGSC0003DMT400086265.v4.03 annot-version=v4.03
Sequence

ATGTCTGAAAGACGATTTCGCTTTGGTTACGTACTTGCATCGAAGAAAGTTTCAAGCTTT
ATTCAAGATTCACTCATCAAGCATGCCCAAGAAAATGGTATTGATCTAGTCCAAATCGAT
CTTGACAAACCATTAATCGAACAAGGTCCTTTTGATTGTATATTCCACAAGCTATATGGT
CCAGAATGGAGGAAACAGTTAGAAGAATTCGCGCTTCAGAACCCAACCGCCATTATAGTA
GATCCAATCGACGCCATTGAAAAGCTTCACAATCGGCTCACAATGCTCGAAGTCGTTAAC
GAATTGAAAATCGCTGGAGATAACGAAACTATCGGAATCCCTATTCAGATTTTCGTTGGA
GAAAATTCGGAATCCCTTTTAGACGCTATTACTAGTCAAGGGTTACATTTCCCTGTTATT
GCTAAGCCGTTGATTGCGAATGGTTCTGCTGATTCTCATCAAATGTCTTTGGTTTTGAAG
CCGGAAGGGTTAGAAGGGCTGAAACCCCCAATTGTTTTACAGGAATTTGTGAATCACGGA
GGAGTTATTTTCAAGGTTTATGTAGCTGGGGAACATGTGAAATGTGTGAAGAGGAGGTCA
TTGCCTGATATTCCGGAGGAGAAATTGGGGATGTTAGAGAATTTGATATCGTTTTCCCAG
ATATCTAATTTGACTGCTCAAGATCAGAATGATGATAGTTTTGCTGAACTGATTGAGAAG
GCGGTGATGCCTCCATCGAGATTTGTGACAGATGTGGCTAATCAGTTGAGGGATGCTTTG
AAGTTGCATCTTTTTAACTTTGATATGATTAGAGATGAAAAAGTTGGGAATCGATATCTT
GTTATTGATATCAATTATTTCCCTGGCTATGCTAAAATGCCAAACTATGAGACTATGATG
ACTGCATTTTTCCTAGATATTGCACGCGAGAAGCTAAACAACGAGTCTCGTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400057940
PEP Infomation

pacid=37453122 transcript=PGSC0003DMT400086265 locus=PGSC0003DMG400035836 ID=PGSC0003DMT400086265.v4.03 annot-version=v4.03
Sequence

MSERRFRFGYVLASKKVSSFIQDSLIKHAQENGIDLVQIDLDKPLIEQGPFDCIFHKLYG
PEWRKQLEEFALQNPTAIIVDPIDAIEKLHNRLTMLEVVNELKIAGDNETIGIPIQIFVG
ENSESLLDAITSQGLHFPVIAKPLIANGSADSHQMSLVLKPEGLEGLKPPIVLQEFVNHG
GVIFKVYVAGEHVKCVKRRSLPDIPEEKLGMLENLISFSQISNLTAQDQNDDSFAELIEK
AVMPPSRFVTDVANQLRDALKLHLFNFDMIRDEKVGNRYLVIDINYFPGYAKMPNYETMM
TAFFLDIAREKLNNESR*

Transcript Sequence

Transcript ID

PGSC0003DMT400086265
Transcript Infomation

pacid=37453122 locus=PGSC0003DMG400035836 ID=PGSC0003DMT400086265.v4.03 annot-version=v4.03
Sequence

ATGTCTGAAAGACGATTTCGCTTTGGTTACGTACTTGCATCGAAGAAAGTTTCAAGCTTT
ATTCAAGATTCACTCATCAAGCATGCCCAAGAAAATGGTATTGATCTAGTCCAAATCGAT
CTTGACAAACCATTAATCGAACAAGGTCCTTTTGATTGTATATTCCACAAGCTATATGGT
CCAGAATGGAGGAAACAGTTAGAAGAATTCGCGCTTCAGAACCCAACCGCCATTATAGTA
GATCCAATCGACGCCATTGAAAAGCTTCACAATCGGCTCACAATGCTCGAAGTCGTTAAC
GAATTGAAAATCGCTGGAGATAACGAAACTATCGGAATCCCTATTCAGATTTTCGTTGGA
GAAAATTCGGAATCCCTTTTAGACGCTATTACTAGTCAAGGGTTACATTTCCCTGTTATT
GCTAAGCCGTTGATTGCGAATGGTTCTGCTGATTCTCATCAAATGTCTTTGGTTTTGAAG
CCGGAAGGGTTAGAAGGGCTGAAACCCCCAATTGTTTTACAGGAATTTGTGAATCACGGA
GGAGTTATTTTCAAGGTTTATGTAGCTGGGGAACATGTGAAATGTGTGAAGAGGAGGTCA
TTGCCTGATATTCCGGAGGAGAAATTGGGGATGTTAGAGAATTTGATATCGTTTTCCCAG
ATATCTAATTTGACTGCTCAAGATCAGAATGATGATAGTTTTGCTGAACTGATTGAGAAG
GCGGTGATGCCTCCATCGAGATTTGTGACAGATGTGGCTAATCAGTTGAGGGATGCTTTG
AAGTTGCATCTTTTTAACTTTGATATGATTAGAGATGAAAAAGTTGGGAATCGATATCTT
GTTATTGATATCAATTATTTCCCTGGCTATGCTAAAATGCCAAACTATGAGACTATGATG
ACTGCATTTTTCCTAGATATTGCACGCGAGAAGCTAAACAACGAGTCTCGTTAG