Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400086114
CDS Infomation

pacid=37477336 polypeptide=PGSC0003DMP400057789 locus=PGSC0003DMG400035685 ID=PGSC0003DMT400086114.v4.03 annot-version=v4.03
Sequence

ATGAATTCCAGAAACCCATTCACTCCTAGAATGGAAATTGGTTCTTCTTCAAAACAACCA
GAAGATATTGGGGGAATAAATACATCTTCTTCTTCTCCCCGTCTTCCACACAAACCAAAA
TTCACTTTTTCTGAACTTCTGCTCCAAGAAAAGATGAATTCTAGAAATACATTCACTCCT
AGAATGGAAATTGGTTCTTCTTCAAGGAGTGTAGATGCCAAAATTGGTTCTTCAAGAAGT
ATAATTGCAGAAATTGGTTCTGATAGAAGCAATATATCAATGGATTTCGCTGCTTCTTTA
AATCAACCAAGACTTGAACAAACCATTACTGATCCAGACACCAAAGATACTTATCTTCTC
AACTTGAAAATTGGGTCTTTTTCTAATGGAAATTGCCCTGTTTACAGAGCTGTGTTTTCG
AAATATACGTATGAGGCTGGCAGAGCCCTCCCTTATGACCATGTTACTTTGAAGATCATT
AACATGAACCTCCATGAGAATGAATTCAACTTGATTCGAAGTCAAAGTGATACACGCATT
GCTCTTTTTGAGAATCCCCACATAATTCGATGCAAGAAAACTTTCATTACTGCAAATTTG
CTATGCGTTTGTTTGCCGTATATGTCTGAGGGATCGCTTCGTTATATTCTCTCCACTCGT
CCCGAAAAGAAATTGCCAGAACGTCTCATTCCTGTTGTTCTTAAAGAAGTACTTATTGGT
CTACAAGACGAACTTCATGTTTTCTACAGACCGACGCCTCATAATAGTTTGAATGCCGGA
GATATCTTTGTTAACATCCACTATTATACTAAAGCTTTGTCGATCAAGTTAGCATTTGAA
ACATCTGTTTATGATTCCGAACCCCCAGATTGTAATGGTGAAGAAGCTAGTTCGTTTTTG
AATCCGAAGAGTATTTCTATATGGGGTGCTGCACCAGAGGTGTTTGAGAGTGAAAATGAG
GATAACAGAGGAGCAAAATCTGATATCTGGCTATTGGGAATAACAGCACTGGAATTGGTG
TATGGGAATTTACCTGTGAAGAATCGAACAGACTTCGATTATATAATTAACAAGTTAAGG
GTGAACAAGAAATTTCCAAAATCACTTAAAAAGATGATGATCAAGAGGGATAAGAAACTC
AAGAAAGTGATGGATTTTGCTAAACGAAAGAAAAGGGTGTTTTCGCGCGAGTTTGAGGAG
ATGGTTCTTGCTTGTCTTAGAGAGAATCCAGACGACAGGCCAACTGCCAAGGAGCTTTTG
AAAACTCCATTCTTTAGTGAAATTGAAAGGTTTAAACAATTTGTGTTGAATACTAATAAT
TGA

Peptide Sequence

PEP ID

PGSC0003DMP400057789
PEP Infomation

pacid=37477336 transcript=PGSC0003DMT400086114 locus=PGSC0003DMG400035685 ID=PGSC0003DMT400086114.v4.03 annot-version=v4.03
Sequence

MNSRNPFTPRMEIGSSSKQPEDIGGINTSSSSPRLPHKPKFTFSELLLQEKMNSRNTFTP
RMEIGSSSRSVDAKIGSSRSIIAEIGSDRSNISMDFAASLNQPRLEQTITDPDTKDTYLL
NLKIGSFSNGNCPVYRAVFSKYTYEAGRALPYDHVTLKIINMNLHENEFNLIRSQSDTRI
ALFENPHIIRCKKTFITANLLCVCLPYMSEGSLRYILSTRPEKKLPERLIPVVLKEVLIG
LQDELHVFYRPTPHNSLNAGDIFVNIHYYTKALSIKLAFETSVYDSEPPDCNGEEASSFL
NPKSISIWGAAPEVFESENEDNRGAKSDIWLLGITALELVYGNLPVKNRTDFDYIINKLR
VNKKFPKSLKKMMIKRDKKLKKVMDFAKRKKRVFSREFEEMVLACLRENPDDRPTAKELL
KTPFFSEIERFKQFVLNTNN*

Transcript Sequence

Transcript ID

PGSC0003DMT400086114
Transcript Infomation

pacid=37477336 locus=PGSC0003DMG400035685 ID=PGSC0003DMT400086114.v4.03 annot-version=v4.03
Sequence

ATGAATTCCAGAAACCCATTCACTCCTAGAATGGAAATTGGTTCTTCTTCAAAACAACCA
GAAGATATTGGGGGAATAAATACATCTTCTTCTTCTCCCCGTCTTCCACACAAACCAAAA
TTCACTTTTTCTGAACTTCTGCTCCAAGAAAAGATGAATTCTAGAAATACATTCACTCCT
AGAATGGAAATTGGTTCTTCTTCAAGGAGTGTAGATGCCAAAATTGGTTCTTCAAGAAGT
ATAATTGCAGAAATTGGTTCTGATAGAAGCAATATATCAATGGATTTCGCTGCTTCTTTA
AATCAACCAAGACTTGAACAAACCATTACTGATCCAGACACCAAAGATACTTATCTTCTC
AACTTGAAAATTGGGTCTTTTTCTAATGGAAATTGCCCTGTTTACAGAGCTGTGTTTTCG
AAATATACGTATGAGGCTGGCAGAGCCCTCCCTTATGACCATGTTACTTTGAAGATCATT
AACATGAACCTCCATGAGAATGAATTCAACTTGATTCGAAGTCAAAGTGATACACGCATT
GCTCTTTTTGAGAATCCCCACATAATTCGATGCAAGAAAACTTTCATTACTGCAAATTTG
CTATGCGTTTGTTTGCCGTATATGTCTGAGGGATCGCTTCGTTATATTCTCTCCACTCGT
CCCGAAAAGAAATTGCCAGAACGTCTCATTCCTGTTGTTCTTAAAGAAGTACTTATTGGT
CTACAAGACGAACTTCATGTTTTCTACAGACCGACGCCTCATAATAGTTTGAATGCCGGA
GATATCTTTGTTAACATCCACTATTATACTAAAGCTTTGTCGATCAAGTTAGCATTTGAA
ACATCTGTTTATGATTCCGAACCCCCAGATTGTAATGGTGAAGAAGCTAGTTCGTTTTTG
AATCCGAAGAGTATTTCTATATGGGGTGCTGCACCAGAGGTGTTTGAGAGTGAAAATGAG
GATAACAGAGGAGCAAAATCTGATATCTGGCTATTGGGAATAACAGCACTGGAATTGGTG
TATGGGAATTTACCTGTGAAGAATCGAACAGACTTCGATTATATAATTAACAAGTTAAGG
GTGAACAAGAAATTTCCAAAATCACTTAAAAAGATGATGATCAAGAGGGATAAGAAACTC
AAGAAAGTGATGGATTTTGCTAAACGAAAGAAAAGGGTGTTTTCGCGCGAGTTTGAGGAG
ATGGTTCTTGCTTGTCTTAGAGAGAATCCAGACGACAGGCCAACTGCCAAGGAGCTTTTG
AAAACTCCATTCTTTAGTGAAATTGAAAGGTTTAAACAATTTGTGTTGAATACTAATAAT
TGA