Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400086060
CDS Infomation

pacid=37432121 polypeptide=PGSC0003DMP400057735 locus=PGSC0003DMG400035631 ID=PGSC0003DMT400086060.v4.03 annot-version=v4.03
Sequence

ATGTTACCTGAAAATGGAGGAATTTCATCTTCCTCATCTCCAATTCCTGATCCTGCTCCT
CCAAAGGCCAACAGTCTTGAAACAGAGCTACTATGTGATGAATCATTCAGTGAAATTATC
AAGGAGGAAGTAGAAGAAGAAGTTGTTAGCTCTGATTCGTTGAATGAACGTAAGAGATTA
CGTACTGTTGAAGAAGAAGAAGAAGATGGAACAGAGGCTGTTTCTGATTCGAATAAATCA
CGTAGAATTCATGAAGATAAAGAAGAAGAAGAAAAAGGGCCAAATGAGATTGATGAACAG
AATGGAAATCAAGATTCAGAACAGAGTGGAAATCAAGAATCTGAAGTAGCTGATGAAAAA
GATGGTGGAAATGAAGAAAACAACGAAGGAGCAGAAGAATCAGAACAAAAGGAAGGCAGA
GAGGATGGAGATAAAGAAGAAGAGGAGAAAGAAACAGAGGGGGGAAATCAAGTAAACAAC
AATGGAGAAGAAGATCAAAACGAAGAAGACGAAACAGAGGAAGTAGAAAAAGAGGATGAA
ACAGAGGAATTGCCCCAATTTTCAACAGCTGAAGAAGAAGGCGAAAATCACGATCTCGAA
GAGCATAGAGAGAATGTAGGAGGAGAAGATAATGTCAATCGTGTAAACTCTGAACAAAAT
GAAGAAGAGGAGAAAGAAACAGAGGAACAGAAACAAAAAGCTGCTGAAAAAGGAAAAAGA
CCATTATTCGAAGAAGATGAAGAAGAGGAACAGAAACAACAAGCTGCTAAGAAATGGCAA
AAAACATCATTGATACCCATCACACCAATTTTTTCCAAATTCCTACGAGGAGAATCATCA
CACAGAACTAAAGGAGATCAAATTCAAAATTCAACACCAAAGGTTGATACTGAATTAGTC
GATATTGAGATAAACACAGACAACAACAAAGGTTATGATTATCATCGGGATTTGGCTATT
TTAAAAGCCATGTATGATTTCAAGTTCATCAATGGGTATTTACCATATCCACACTCAGAT
GAATTACACAATCACATCATGGATTTGATGCCTGATTTGAATATCCTCGGAAATGATTTG
ACGGTAAAGATCACAGCATTTGAGGATGATTTCAATACTGTTATAATACTGGATGGAGAT
AATCCTGAAATGGCACAGCCTGTTGAACGAGAAATTTTCGACCTGTCTATGCAATTATGG
GGTAATTCCGACGACAATGTTGGCGATGGGATATAG

Peptide Sequence

PEP ID

PGSC0003DMP400057735
PEP Infomation

pacid=37432121 transcript=PGSC0003DMT400086060 locus=PGSC0003DMG400035631 ID=PGSC0003DMT400086060.v4.03 annot-version=v4.03
Sequence

MLPENGGISSSSSPIPDPAPPKANSLETELLCDESFSEIIKEEVEEEVVSSDSLNERKRL
RTVEEEEEDGTEAVSDSNKSRRIHEDKEEEEKGPNEIDEQNGNQDSEQSGNQESEVADEK
DGGNEENNEGAEESEQKEGREDGDKEEEEKETEGGNQVNNNGEEDQNEEDETEEVEKEDE
TEELPQFSTAEEEGENHDLEEHRENVGGEDNVNRVNSEQNEEEEKETEEQKQKAAEKGKR
PLFEEDEEEEQKQQAAKKWQKTSLIPITPIFSKFLRGESSHRTKGDQIQNSTPKVDTELV
DIEINTDNNKGYDYHRDLAILKAMYDFKFINGYLPYPHSDELHNHIMDLMPDLNILGNDL
TVKITAFEDDFNTVIILDGDNPEMAQPVEREIFDLSMQLWGNSDDNVGDGI*

Transcript Sequence

Transcript ID

PGSC0003DMT400086060
Transcript Infomation

pacid=37432121 locus=PGSC0003DMG400035631 ID=PGSC0003DMT400086060.v4.03 annot-version=v4.03
Sequence

ATGTTACCTGAAAATGGAGGAATTTCATCTTCCTCATCTCCAATTCCTGATCCTGCTCCT
CCAAAGGCCAACAGTCTTGAAACAGAGCTACTATGTGATGAATCATTCAGTGAAATTATC
AAGGAGGAAGTAGAAGAAGAAGTTGTTAGCTCTGATTCGTTGAATGAACGTAAGAGATTA
CGTACTGTTGAAGAAGAAGAAGAAGATGGAACAGAGGCTGTTTCTGATTCGAATAAATCA
CGTAGAATTCATGAAGATAAAGAAGAAGAAGAAAAAGGGCCAAATGAGATTGATGAACAG
AATGGAAATCAAGATTCAGAACAGAGTGGAAATCAAGAATCTGAAGTAGCTGATGAAAAA
GATGGTGGAAATGAAGAAAACAACGAAGGAGCAGAAGAATCAGAACAAAAGGAAGGCAGA
GAGGATGGAGATAAAGAAGAAGAGGAGAAAGAAACAGAGGGGGGAAATCAAGTAAACAAC
AATGGAGAAGAAGATCAAAACGAAGAAGACGAAACAGAGGAAGTAGAAAAAGAGGATGAA
ACAGAGGAATTGCCCCAATTTTCAACAGCTGAAGAAGAAGGCGAAAATCACGATCTCGAA
GAGCATAGAGAGAATGTAGGAGGAGAAGATAATGTCAATCGTGTAAACTCTGAACAAAAT
GAAGAAGAGGAGAAAGAAACAGAGGAACAGAAACAAAAAGCTGCTGAAAAAGGAAAAAGA
CCATTATTCGAAGAAGATGAAGAAGAGGAACAGAAACAACAAGCTGCTAAGAAATGGCAA
AAAACATCATTGATACCCATCACACCAATTTTTTCCAAATTCCTACGAGGAGAATCATCA
CACAGAACTAAAGGAGATCAAATTCAAAATTCAACACCAAAGGTTGATACTGAATTAGTC
GATATTGAGATAAACACAGACAACAACAAAGGTTATGATTATCATCGGGATTTGGCTATT
TTAAAAGCCATGTATGATTTCAAGTTCATCAATGGGTATTTACCATATCCACACTCAGAT
GAATTACACAATCACATCATGGATTTGATGCCTGATTTGAATATCCTCGGAAATGATTTG
ACGGTAAAGATCACAGCATTTGAGGATGATTTCAATACTGTTATAATACTGGATGGAGAT
AATCCTGAAATGGCACAGCCTGTTGAACGAGAAATTTTCGACCTGTCTATGCAATTATGG
GGTAATTCCGACGACAATGTTGGCGATGGGATATAG