Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400086045
CDS Infomation

pacid=37474165 polypeptide=PGSC0003DMP400057720 locus=PGSC0003DMG400035616 ID=PGSC0003DMT400086045.v4.03 annot-version=v4.03
Sequence

ATGAACTATGAAAATTATGACCCTTTTTTCCCTGACCAACTTGTTGTGGATCTTTATCTT
CCAATTTGGGCTAAACTTTCAAGTTTTAAGTCCAAACCAGCTTTCATTTGGGCTGAAGAT
GGCCCATTGGTTCAGTTTTCGTCGATCACTTACGAGGAGTTAAATAGTTCAGCCCAATGT
ATTTCTTCAGAATTGTTACTTAGTTTAAGAAAAAATGATACTGTTCTTGTTTTATGTTCA
CCAGGACTTGAATTTGTTGAAGTGATTTTTGGTTGTCAAAGGGCTGGAGTTTTAGCTGTT
CCTATTAGCCCTCCTCACCCGTCTTTTTCGAGTGGTAATTGGCATCATTTACTTAGAGTT
GTGTCTCAAACAAGGCCTAAAGTTGCTATAGCACAACGCGAATACATCAAACATGTTGAG
AAGTATGTTGCAAGATCGAGTAATAAGAAGTTGTCCGAGGCCTTGAAGAAGGTTCGATGG
ATTTCAACTGAGGATTTAAATGGCAAGAAAATGGAAATGCAAGTGGAAAATGTGAATTTT
GGTTACAATGGTTGCAATGTTGATGATGTCTACTTGATTCAGTACACTTCTGGTACAACT
GCTATTCCTAAGCCTGTTTTAGTGACTGCAGGCTCTGCAGCTCATAACGTTAGAGTCGCG
AGGAAAGCTTATGATTTACACCCGAACACTGTTGTTGTTTCGTGGTTACCTCAGTACCAT
GACTGTGGACTTATGTTTTTGTTGTTGACGATTGTTTCAGGGGCAACGTGTGTGTTGACA
TCCCCGAATACATTTGTCAATCGTCCTAGGATTTGGCTTGAATTGATTTCAGAGTTCAAG
GGAACTTGCACTCCTGTTCCTTCATTTGCTTTACCACTCGTGTTGAAACGTGGTCATGCT
GAGGCAACTGTTAACAATCCTATTAGTATGTTGAGCTTGATGAATTTGATCATCGTTAAC
GAGCCAATATACAACGATTGTGTTGAAGAATTTGTTGAAGTTTTTAGGCCTTTTGGGCTA
AATCCTTTGGCAATTTCTCCTTCATATGGCTTAGCTGAGAATGGCACATTTGTTTCAACA
TCATGGAGAAGTAGTAGTTTTGACAAATTTTCGACGTATAAAAAGCTCTTGCCAAGTGCT
AGGCTTGATGAAGATCATGTAGACATTGAAATTCTAGTTGTGAATGAAGATACAAATGAG
ATTGTGGAAGATGGAATTGAAGGTGAAATATGGATTTCATCTCCTAGCAATGCTATTGGA
TATTTAGGACATCCATCTCTAACTCAACAAGTGTTCAACGCCACGCTTAAAAATAAGGCG
GGAAAATGCTATGTTCGAACAGGGGATAGAGGAGTTGTCGAAGGAGAACTGAGATTTTTA
TACGTGACAGGACGATGTTCAGACGTTTTTAAACTCTCAAATGGACAAGAAATACATCCA
CATTATTTGGAGACATTAACTTATAATAGTTGTCCAAATTTCCTGCGAGGTGGTTGTGTT
GCAGCATTCGAGATGTCTGAATCTGAATACGCATCTGTAGTTGTTGTTGCGGAAGTACAA
AGCAAGGGTGAAATAGAGAGTGATATGTTTTTTAAGCAAATATGTGAAGGAATAAGGAAA
ACAATAATGAAAGAAGAAGGTGTTGGAATTGGACTTGTGGTACTTGTTAAATTTGGAAAT
GTACCAAAGACTACTTCTGGGAAAATACAAAGATGGCTAGCTAAGTATAAATTTGAGAAG
TCACAAATGAATATTATAATGCAAATGAAGTTTGATAATAATGGTAATATTCAAAGCACA
ATGCAAAAAATTATGCAAATTGGAAAAAAAGAGGCTAAAAAGGGAAAGAAAGTGCTAGTT
GTTGAAGAAGAAGAAGGGTTATTTTTTGCTCCAACAAATAGGACTTTGAAATCTTCTCTT
TAA

Peptide Sequence

PEP ID

PGSC0003DMP400057720
PEP Infomation

pacid=37474165 transcript=PGSC0003DMT400086045 locus=PGSC0003DMG400035616 ID=PGSC0003DMT400086045.v4.03 annot-version=v4.03
Sequence

MNYENYDPFFPDQLVVDLYLPIWAKLSSFKSKPAFIWAEDGPLVQFSSITYEELNSSAQC
ISSELLLSLRKNDTVLVLCSPGLEFVEVIFGCQRAGVLAVPISPPHPSFSSGNWHHLLRV
VSQTRPKVAIAQREYIKHVEKYVARSSNKKLSEALKKVRWISTEDLNGKKMEMQVENVNF
GYNGCNVDDVYLIQYTSGTTAIPKPVLVTAGSAAHNVRVARKAYDLHPNTVVVSWLPQYH
DCGLMFLLLTIVSGATCVLTSPNTFVNRPRIWLELISEFKGTCTPVPSFALPLVLKRGHA
EATVNNPISMLSLMNLIIVNEPIYNDCVEEFVEVFRPFGLNPLAISPSYGLAENGTFVST
SWRSSSFDKFSTYKKLLPSARLDEDHVDIEILVVNEDTNEIVEDGIEGEIWISSPSNAIG
YLGHPSLTQQVFNATLKNKAGKCYVRTGDRGVVEGELRFLYVTGRCSDVFKLSNGQEIHP
HYLETLTYNSCPNFLRGGCVAAFEMSESEYASVVVVAEVQSKGEIESDMFFKQICEGIRK
TIMKEEGVGIGLVVLVKFGNVPKTTSGKIQRWLAKYKFEKSQMNIIMQMKFDNNGNIQST
MQKIMQIGKKEAKKGKKVLVVEEEEGLFFAPTNRTLKSSL*

Transcript Sequence

Transcript ID

PGSC0003DMT400086045
Transcript Infomation

pacid=37474165 locus=PGSC0003DMG400035616 ID=PGSC0003DMT400086045.v4.03 annot-version=v4.03
Sequence

ATGAACTATGAAAATTATGACCCTTTTTTCCCTGACCAACTTGTTGTGGATCTTTATCTT
CCAATTTGGGCTAAACTTTCAAGTTTTAAGTCCAAACCAGCTTTCATTTGGGCTGAAGAT
GGCCCATTGGTTCAGTTTTCGTCGATCACTTACGAGGAGTTAAATAGTTCAGCCCAATGT
ATTTCTTCAGAATTGTTACTTAGTTTAAGAAAAAATGATACTGTTCTTGTTTTATGTTCA
CCAGGACTTGAATTTGTTGAAGTGATTTTTGGTTGTCAAAGGGCTGGAGTTTTAGCTGTT
CCTATTAGCCCTCCTCACCCGTCTTTTTCGAGTGGTAATTGGCATCATTTACTTAGAGTT
GTGTCTCAAACAAGGCCTAAAGTTGCTATAGCACAACGCGAATACATCAAACATGTTGAG
AAGTATGTTGCAAGATCGAGTAATAAGAAGTTGTCCGAGGCCTTGAAGAAGGTTCGATGG
ATTTCAACTGAGGATTTAAATGGCAAGAAAATGGAAATGCAAGTGGAAAATGTGAATTTT
GGTTACAATGGTTGCAATGTTGATGATGTCTACTTGATTCAGTACACTTCTGGTACAACT
GCTATTCCTAAGCCTGTTTTAGTGACTGCAGGCTCTGCAGCTCATAACGTTAGAGTCGCG
AGGAAAGCTTATGATTTACACCCGAACACTGTTGTTGTTTCGTGGTTACCTCAGTACCAT
GACTGTGGACTTATGTTTTTGTTGTTGACGATTGTTTCAGGGGCAACGTGTGTGTTGACA
TCCCCGAATACATTTGTCAATCGTCCTAGGATTTGGCTTGAATTGATTTCAGAGTTCAAG
GGAACTTGCACTCCTGTTCCTTCATTTGCTTTACCACTCGTGTTGAAACGTGGTCATGCT
GAGGCAACTGTTAACAATCCTATTAGTATGTTGAGCTTGATGAATTTGATCATCGTTAAC
GAGCCAATATACAACGATTGTGTTGAAGAATTTGTTGAAGTTTTTAGGCCTTTTGGGCTA
AATCCTTTGGCAATTTCTCCTTCATATGGCTTAGCTGAGAATGGCACATTTGTTTCAACA
TCATGGAGAAGTAGTAGTTTTGACAAATTTTCGACGTATAAAAAGCTCTTGCCAAGTGCT
AGGCTTGATGAAGATCATGTAGACATTGAAATTCTAGTTGTGAATGAAGATACAAATGAG
ATTGTGGAAGATGGAATTGAAGGTGAAATATGGATTTCATCTCCTAGCAATGCTATTGGA
TATTTAGGACATCCATCTCTAACTCAACAAGTGTTCAACGCCACGCTTAAAAATAAGGCG
GGAAAATGCTATGTTCGAACAGGGGATAGAGGAGTTGTCGAAGGAGAACTGAGATTTTTA
TACGTGACAGGACGATGTTCAGACGTTTTTAAACTCTCAAATGGACAAGAAATACATCCA
CATTATTTGGAGACATTAACTTATAATAGTTGTCCAAATTTCCTGCGAGGTGGTTGTGTT
GCAGCATTCGAGATGTCTGAATCTGAATACGCATCTGTAGTTGTTGTTGCGGAAGTACAA
AGCAAGGGTGAAATAGAGAGTGATATGTTTTTTAAGCAAATATGTGAAGGAATAAGGAAA
ACAATAATGAAAGAAGAAGGTGTTGGAATTGGACTTGTGGTACTTGTTAAATTTGGAAAT
GTACCAAAGACTACTTCTGGGAAAATACAAAGATGGCTAGCTAAGTATAAATTTGAGAAG
TCACAAATGAATATTATAATGCAAATGAAGTTTGATAATAATGGTAATATTCAAAGCACA
ATGCAAAAAATTATGCAAATTGGAAAAAAAGAGGCTAAAAAGGGAAAGAAAGTGCTAGTT
GTTGAAGAAGAAGAAGGGTTATTTTTTGCTCCAACAAATAGGACTTTGAAATCTTCTCTT
TAA